HMM Seed Alignment: TIGR01477
Download Alignment>GP|3845078|gb|AAC71798.1/1-330
MKDHYINILLFALPLN.ILVYNQR.....SYYI.....TPRHT......ETNRSLCECELYSPTNYDSDPEMKRVMQQFE
DRTSQRFHEYEERMQSKRMQCKEQCDKEIQKIILKDKLEKELMDKFDTLHTDIQSDAIPTCVCEKSLADKVEKGCLRCGY
GLG.TVAPTVGLIGAIA...VNEWTKAA............TAAATQKGIEAGINV........VIDTLKRLFNIE.....
.VVTDLKWKTLITAQNYTDKILVGDVIRKLGNTLCGGS......EDTAG.....GFCLFTVKANTLP.Q...........
............AINGHVTKAISEGTAEVVK...........VTEAEMGKVTT.....SAGAYSTGIIVSVVAIVVIVLI
MIIIYLILRYRRKRKMTKKMQFMKLLNE
>GP|5901723|gb|AAD55383.1/1-350
MKIHYINILLFELPLN.ILIYNQR.....NHKS.....TTHHT...LKIPITRLLCDCELYSPANYDDDPQMKKVMKNFN
RQTSERFHEYDERMKTTRQKCKEQCNKEIQKIILKDKLEKELAEKFVTLQTDIQNDAIPTCVCEKSLADKVEKGCLRCGS
VFGGGVAPSVGILGGIG...QLGLDAWKAAAIKTA..T..KEAIAEAT.KTATQE........GMNAVISKINELLTKFQ
G.EPVVDLTRIVNPSTFDKGTALFETADKLFGEACIIP......GTKTN....YSFCTTAIYYD.GE.............
............YNIKNFGKVGADVYKATYT...........SQKGTLEAAKVGAVEATYGGYQTAIIASIVAILVIVLI
MVIIYLILRYRRKKKMKKKLQYIKLLEE
>GP|4494001|emb|CAB39060.1/1-371
MKVHYFNIFLFSLPLN.IILLSSQ.....VYNQ.....RNHYM..KPHTYTNRSLCECELYAPSNYDNDPEMKAVMQGFD
RQTSQRFEEYNERLLENKQKCKEQCNKEIQKIILKDKLEKELMDKIVTLDTDIQSDAIPTCVCEKSVADKVEKTCLKCAG
VLGGGVTPAWGLISGIV...YTGWKTAALAAAT....KEAIAEAAAKGAAAGLKA........GVKSVISEVSSLFG..V
STIDDKALGLVINATNYRDAQLISGAIYKQFEMTCMPP......GALPN..LSNPICISMWSKFVSTNG..SSRD.....
.LIKNNIKTYVQSFVSQAETTAAHVTKTTTE...........KVTTELTTEKTGEIAATYMGYQTPIIASIVAILVIVLV
MVIIYLILRYRRKKKMKKKLQYIKLLEE
>GP|7670008|emb|CAB89212.1/1-372
MKIHYTNILLFPLKLN.ILV.........NTHK.......KPSITSRHIQTTRLLCECELYT.PNYDNDPEMKSVMQQFH
DRTTQRFHEYDENLKEKRQKCKDKCDKEIQKIILKDKIEKELTEKFSSLQTDIHSDAIPTCICEKSLADKVEKNCLKCTQ
NLGKIVAPSSGVLAGISEAALSVWKTTEIAAAMELAKQAGAAAGLKAGHLA............GTNAVIEQLR.TLG..I
YFVGDKLLETIIDVTNYMNVSFIYDKVYSHYTTSCTPS......LVN......DQLVGTFNTSDPFCNLVHSNLQGSFYR
SSAQTIIYEKVEEAVAGAEQAATTKTAVMTP...........IYTTEFTAKNIAEVEAATTSYYTPIIASIVAIVIIVLI
MVIIYLILRYRRKMKLKKKLQYIKLLEE
>GP|3845077|gb|AAC71797.1/1-375
MKLYYSKILLFSLILN.ILVPSSY.....AHNK.....NKQYISARTPTITSRMLSECDINT.SIYDDDTEMKFVKENFD
RQTSQRFEEYNERLLENKQKCKEKCDKEIQKIILKDKLEKELMDKFATLQTDIQNDAIPTCVCEKSLADKTEKFCLNCGV
QLGGGVLQASGLLGGIGAVAVNAWKDAALEAAIDFATEAGAAAGVAAGEAA............GKAVVIKSLK.YFR..V
DVFFPKIFNSIGNAIPYYDAKTIGAAIAEKHAQNCALV......STNEG.....AMCYPFEVNLGIREAITFTQT..GP.
.PAKYAIPDTVSEIVEGAEQAAKAAAKAAEK...........GVTAAIKAKETRLLEAGFNSSISSINASIIAIVVIILI
MVIIYLILRYRRKKRMKKKHQYIKLLEE
>GP|4493998|emb|CAB39057.1/1-349
MKVHCYNILLFSFTLI.ILLLSSS.....QVNNQMNHYNRAHMKNIEPTKSYRSLCERELYAPANYDNDTEMKRVMQQFE
DRTSQRFHEYDERMQSKRMQCKEQCDKEIQKIILKDKLEKQMEQQLTTLETKIDTDDIPTGVCEKSLADKTENFCLNCGK
NMT.AIAPWWGLVCGVGYAGWS..HYVPIAVAK.............AAMDA............GMNVVINALK.KLG..V
EKLTAVILKEISRTGNYANIINFSSIISTELKAVCRVT......LSSP.....SD..GAMREGICSILKKGRTP......
....PTVEQVVSGAFKLIDEKAPQAAKAAKQ...........IEAANYTSTTSSLT........TGIIASIIAIVIIVLI
MVIIYLILRYRRKKKMKKKLQYIKLLEE
>GP|7670012|emb|CAB89216.1/1-344
MKFHYINIFLFALPLN.ILVHNKR.....NHMK.....TIICTPKTKQTKTHRTLCECELYAPSNYENDSEMKEVMEIFD
RQTSERFREYDERMQHKRKQCKEQCEKDIQKIILKDKIEKELTEKFGALQTDIRTEDIPTCVCEKSVADKTEKVCLNCGK
TMG.AVAPAWGFVSGIG...YVAWTQYV............AAKILEVGIKKSVQV........SLDKVMEIVTQIHSLTT
AEIPKFSAAQILSSGNFTNNISLIDMVQYLRNNMYGVI......ESQKC....ERFGFILDTMGKNTLK...........
............VFNRNYHIQVEAVKNAVDA...........AEAAESLKLAT.....NTSILTNTIIASVIAILVIVLV
MVIIYLILHYRRKKKMKKKLQYIKLLKE
>GP|3845083|gb|AAC71802.1/1-356
MKVHYINILLFTLPLN.ILVNGQG.....HYSS.....TKHPISSTKSSKYHRSLCECEIYTS.IYDNDPEMKKVMQDFD
QQTSQRLREYDERLIKNRQKCKDQCDKDIQKIILKDKIEKELTKQLEALEVDITTEDIPACVCKKSVEDKVGKNCLKC.G
GILGGGIPGLGVLGAYAVNSMV...QVAMDAA........KKAAIAEGAEAGIAE........GIKVAIQGVPKKFL..L
YTLNGKELQAVINANNFQNPSFFYGEIMAEYVSWKKSD......MVNSYG....LFSFIEESCE..NNP...........
.......DKIMKFILANSNDIAKDAGKAATKMTTQTTEALTLKKTAEATSTSA.....IFS...NPIVISFIVLVIIVLI
LLIIYLILRYRRKRKMKKKLQYLKLLKE
>GP|4494025|emb|CAB39120.1/1-321
MKIHYINILLFALPLN.ILVNNQR.....NHNN.....STYHTSNTKTIKSHRSLCECKLYAQSNYENDQEMKDVIKEFN
DRTAQRFEEYNERMQVKKNQCKEQCDKEIQQIILKDKIEKELTERFSALETKIDTNDILTCICEKSVADKVEKTCVKC.G
RILGTAVPELSLIGGIAVYA......AAQSAT........MKTFISE....................TIDVLNRIGG..M
SQLFGAKISQFVTPSIYGKPMTLVTTILSEKEKLCLCV......ANKKK.....LLCGGIERS.................
.........FEQNLPARIAYAVNQGVHTAN............ETWATATTPTT.....FLT...NPFVASSIAIMIIVAI
VLIIYLILRYRRKQKIKKKIQYIKLL..
>GP|3845082|gb|AAC71801.1/1-312
MKLNYTKILLFFFPLN.ILAN........NNKN.....KPSITQRHTPRYTSRVLSECDIRS.SIYDNDAEMKSVKETFD
RQTSQRFEEYEERMKGKRQKRKEQRDKNIQEIIEKDRMDKSL.........................AEKVEKVCLRCGF
GLG.GVAAGVGIFGAIAVN...EWTKAALVAA........AQKGIDAGIKS................ALKGLEKIYE..L
SDFSYLKWSAMVTPTTYDQPMDLIAIVTKAYN.MCDDV......EAAKG....SLFCQAMEGIANEPD............
....G..CP.VKTFSQMAVDAAEAAGKVS................KTTEEAGIALANNTSYNSYIAIAYSVTAILIIVLI
MLIIYLILRYRRKKKMNKKLQYTKLLNQ
>GP|4493999|emb|CAB39058.1/1-317
MKLHYTKILLFFFPLY.ILVTSYHV....YSKN.....KPSITSHHTPITTSRVLSEKDLQS.SIYDNDADMKSVKENFD
RRTSQRFEEYEERVKDKRQKCKEQRDKDIQKIVLKDKMEKNL.........................AEKVEIGCLRCGC
ALGGGVAPIWGLVSGLWYA...TWSQYVSAKV........LEEATNAAIKAG............IIKAIEGLKELQD..L
GKLVGDKWSNIVTPETYSNPNLLSRALQRVNIAMCYSE......SNEN.....VLFCNAIQRRPES..............
.......VFVPASKVAADAGEAGKAVYLA.................T.EKAELLKIAPATNALTTAIIASVVAIIIIALV
MIIIYLVLRYRRKKKMKKKLQYIKLLNE
>GP|7670010|emb|CAB89214.1/1-359
MKLHYTKLLLFFFTLN.ILLTSYHA....HNKN.....KPSITPHHTRSTTSRLLSEYDTES.SIYDSDDEIDSVKEIFE
RQASQRLREYDERLQEKRQKRKEQRDKNIQKIIHKDKMEKNL.........................AEKIEKGCLRCGC
GLG.SVAGSIGLFGAVAIN...IWKPAALDAA........ITAALNANAVKIAAAANAAGEVIGKALVIAELQ.KMG..I
STLKGQTLKSFFRTISYKNVSSITKAVYGQHYEICVYDPSRNLLSSFGDVNRHIGICNSVWKQISAVSQ.RGQYI.....
.SHEEVIKRTVETMMSEAEVSAKAAAKTAEA...........ANKLAIEEAQEQVMEATIYNWYTTIGYTILAILIIVLI
MIIIYLILRYRRKKKMKKKAQYTKLLNE
>RIF_rifin/1-318
MKVHCYNILLFSLLLHRLLLSSSKVNIEMNHHN.....TPHIKN.REPTKSYRSLCECELYT.YIYDDDPDMKEIMNDFD
RQTSQRFEEYNERVNKNRQKCKEQCDRDIQNIILKDKVEKSL.........................SEKVEKGCLRCGC
GLG.GVAAGVGIFGALGTY...GWKVAATATA........IEFATQEGIKAG............IQAAIEQIK.ITV..F
NSLLNVEWLNFINASNYNSIAGLVEAVKAAVV...STER.......TS.....ELSSNTMDRVRNALS............
.......EAENWFSPAVREGTQTTASTIT.................TVQRTQLVDVTATSTYSYMAIAYSVIAILIIVLV
MIIIYLILRYRRKKKMNKKAQYTKLLNQ