HMM Seed Alignment: TIGR01447
Download Alignment>OMNI|MT0657/2-555
VRAFNQAGVLDVSDVHVAQR............LCALAGE...SDERVALAVAVAVRALRAGSVCVDLLSIARVAGHDDLP
WPDP....................ADWLAAVRASPLLADP......PVLH.......LYDDRLLYLDRYWREEEQVCADL
LALLTSR.RPAG..V.................................................................
PDLRRLFPTGFDEQ.RR.......AAEIALSQGVTVLTGGPGTGKTTTVARLLALVAEQAELAGEPRPRIALAAPTGKAA
ARLAEAVRREMAKLDAT....DRARLGDLH..AVTLHRLLGAKP..GARFRQDRQNRLPHNVIVVDETSMVSLTLMARLA
EAVRPGAR........LILVGDADQLASVEAGAVLADLVDGFS..............................VRDDAL.
.VAQLRTSHRFGK..VIGTLAEAIR...AGDGDAVLG................LLRSGEER.IEFVD.DEDPAPRLRAVL
VPHALRLREAA........LLGA............SDVALATLDEHRLLCAHRDGPTGVLHWNRRVQAWLA....EETGQ
PPWTPWYAGRPLLVTANDYGLRVYNGDTGVVLAGPTG.........LRAVISGASGP...LDVATGRLGDVETMHAMTIH
KSQGSQVDEVTVLMPQEDSRLLTRELLYTAVTRAKRKVRVVGSEA.SVRAAIARRAVRASGLRMRL
>OMNI|NTL01XF00426/4-610
LAALNQAGVLRTLDDALARS............LCRLDPK...TPDKVAAAAALASMAVAHGHAGVDLAHPGLLAG.EMFD
WPSA....................ADWVHLLRASRWVAEPSEGEA.PAPTG...QPLVLEQGVLYLRRYREYERRLAIGL
RRIAAARLPPAE..S.................................................................
AAVATVFAALFPQA.RAGQDRQASAAALALQRALLLVTGGPGTGKTTTIARLLLLRVAQARQQGQASLRIALAAPTGRAA
ERMAESLRAAAGYVSAAGG..DAALFAALPSGASTVHRLLGVIP.DTPRFRHCEDNPLPYDVIVVDEASMMDLPLMCKLV
DAVADGTQ........LILLGDPDQLPSVEAGDVLAGILAAAGSGEVLDAADAQALAPLLGAPSAAVVAECHVVRGGLHG
HRMHLQHSHRQGEDLALAPLAEAVR...LGDATAVLG................MLRRGTLRGVQFHEGVLDPCVGAGQVL
LAH...WRALA........ALSD............PVQALAVARRLRLLTALREGPQGAAGINARIERLLG....GGGVD
G....YFHGRLLLMTETSPRQRLFNGDIGVCLRDEDGT........MWAWFSGAGGEG.VRAFAPATLPAHESAFAMTVH
KAQGSEFDTVWLQLPRQESRVLSRELIYTGLTRARHALHVAGSES.VLCAALARQAVRVSGLAWRL
>OMNI|NTL03PA04284/34-701
LDLWVARGWLRALDRAFVAF............LVELQPQ...ADPRVLLAAALTSHQLGHGHVCLDLEATVGAPD.AALS
LPPEGDEGRDVL.LPSQLLHGVRLDAWREALAASPLVEVVDERPGDPEPSETATSPLVLCAQRLYLRRYWRHELEIALAL
RERLGRQAPLAADLA.................................................................
PRLAALFAQAPTEDGQRVTDWQKLACALAARGYFSLITGGPGTGKTTTVVRLLGLLQAPAVAAGQP.LRIRLAAPTGKAA
ARLSESIGQQVRALPLA.....EDVLQAIPAEVTTLHRLLGSRP.DTRHFRHHRDNPLALDVLVVDEASMIDLEMMASLL
DALPPQAR........LILLGDKDQLASVEAGAVLGDLCRDAEEG..WYSAETRAWLQRVSGETWQGLREGSSQAHPLAQ
QTVMLRHSRRFGASSGIGRLARLVNRQQAGDARALLDSPPAD.........LFDLRLRGERDAAFARLFVDGHPQAPGTP
YGYRHYLQRLAEGRPAAGLALEDG......AWERWAQSVLTAFDAFRLLCALRRGPWGVEGLNQRVAAELL....RLGLI
EADHGWYEGRPVLVTRNDYSLGLMNGDIGIALRLPERNDDGSLRFALRVAFPRNDGSGGVRFVLPSRLVEVDTVFAMTVH
KSQGSEFAHTALVLPDALNPVLTKELVYTGITRARDWFSLVESLPGVFEEAVRRKVRRLSGLMLHL
>OMNI|VC2319/9-704
AKRLLAQGALRPLDVQFARFIG.........KQAVLAGHNAAESELLSVLSAALSAELGRGHICLPLCDAQGNRCDLAAL
IGLYGEASLQHS......ERWLA.VDWQALLQASPLVGQQGE....AVPL.......MFDGSRLYLHRYWHYEKQLAARL
TELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADL
QALEQLIPLTHCLNWQK......VAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKV.PEIKLIAPTGKAA
ARLTESMGKAVSQLAIE.....PEIAAAIPSSSSTIHRLLGAIP.GSAEFRHHTRNPLHLDLLVVDEASMVDLPLMVKLV
EALPKHAR........LILLGDKDQLASVEAGAVLGDICTFLNQG...YGHEQGAQLAELTG.FATLRQTASKTVNPVAD
CLCMLQKSYRFDARSGIGQLAKAIN...SGSPARVEA...............VWQQSFSDIEH.FALSGEHYQQLLQTLV
QAYRPYLSLLN........QPTEQFESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLNTRIERALN.A..HKLIK
TQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGR.....LKVYFELPDGS..IKAVLPSRVPQHETAYAMTIH
KSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLYCDNK.VLQRAIKVKTQRASGLVARL
>OMNI|NTL01PM0519/5-649
LKELKQHKVISEGDYYFAQLIAD.......KQPDELPRE...QKNLAILLAALCSYSYQQGNTCLFLEKGLESNYFNLAY
RTAEQHYLH.............IIQEKIAFLPIECWQSSLADHIAFTATPLEKVAPLVFQFNALYFYRIWQDEYRVAHYL
QRAVQRGAETAPIAY.............................................................EQIQ
AILMHYFPAVQQIEGVN...WQKVAVATALKQPFCLITGGPGTGKTTTVARLLLALQTLSACQ....LKIKLVAPTGKAA
ARLTESINGALTRLAQENMAISADLIASIPTTAQTLHRLLGIRF.FEETPTFHPNNPLPLDVLVVDEASMIDLPLMAKLL
QALKPNTK........LILLGDENQLSPVEAGEMLGALSEFSQHAYS......P.ALTQYLKAVADIELISSDQGSPLRD
HLCRLHHSHRFSGDSGIGQLAQAIN...QGNVEVSWNAFTHFNDIEMVDFDQVALLKGDNPSLYSQACAALVVKSAVEKY
TDYLVKLKALQQQSP....ILNEQ..........QVGEIFVLFNAVRFLTALRVGELGVEQLNQKIAQRLQQK..GLLDF
KHERDWYLGKPIMIQQNDRHIGLYNGDIGLFLG...QG........K.VWFEQGQGH..YKTVLASRVPNYETAFVMTVH
KSQGSEFAHTCLVLPTEPNPILSRELIYTGVTRAKQQLTVFSSAE.IWKSAVKNPVKRQSGLNQLL
>OMNI|NTL01BA00433/5-602
LKKAVKLKIIRPIDFYFS...............QFIAQK....NNIVMLVAACVSYESSRGYISLPIKYFEKHYFFSSSN
EVFIKKILT..........LLEKKINWPVELLKHASIGNGG.....TSTP......LVLHKKKIYLYKMWKSESNIFNYL
YTKNKKNKINQKKCS.................................................................
KILENLFPQKNMSFQK.......IAVALTLINNITFIIGGPGTGKTTTILKIIIALIKSSKKS....IKIQLSAPTGKAT
THLNEILKNNIFDLYFS.....EKEKCSLPSTATTIHQLLGIQKISQKSFFN.KSNCLDLDVLIIDEISMVDILMMEKIL
SSISKNTK........LIFIGDHNQLGPIESGSILRKICYYANDG....YSFKSMISIEKLTQYKLCKKINKKTTNFISD
NICVLNKNYRFNKNSGIYTLSNAIFKKKTRIIESLFD..................NSIKNIFFYETNSSEQYKKMIKNIC
LNYEDFWEKIYKKAT....................MKEIIESFQNYQVLCILHDGLFGVNIINKKLEENMYKKNIIKYFY
IDGEEWYIGKPIMIINNNRALNVSNGNIGITNINKNG........ILQVSFLKENNT..INNIPVKILRNYKTAWAITVH
KSQGSEFMNTALILPNFNSHILNKDTLYTGITRSRKILSIFSDKKIFLNTIFKNTNKILF......
>OMNI|BB0632/10-602
FLKDKNKKFLTPELKLYEIIELLNINKKNCYKAQTLARS..TNNENIVIFLIFLFNYFDKGHLRADINLLAKDIQNTIIF
TKDNLEKTNKSYNKLIKILKGLETFGNLETIKNIVLLLKKNNILMEFNKLKITTPLILENNIYIYTQKNYREEEELIKQI
IKRLENHKSELN..D.................................................................
NKIQNIISNLNTNNLNK...EQITSVRKALKSNFFLLSGGPGTGKTTTVNYILKAINKTLNNKKK..GLVAITAPTGKAS
LRLQTSIDYSFKN...............LEIECNTIQKLLGIKFINKKNLYD.EENQLNFDVIIIDEASMVDAHTFLKLL
KATPITTK........LIMVGDKNQLPSVNEGNVYSSLLGIQKIN.................................SD
NVEDLKENFRSNK..EINLLSKAIYKEDSTLICKYIN................NNKNIQLKEIEKINLKKDLIEYTNNLY
RKIPTFNLKLLKESK....................IETILETLLENIILSSKNFGKFGTKTLNEIIKTYLKK......TY
GS....FIGQIIMITKTDYKNKLFNGERGVIFNENSK.........FYALFQRKDEK..YKKINLDLLTNYEFSFATTIH
KSQGSEYKHIKVILENN..PFLTKELMYTAITRAKDSLEIISNKE.TIIKLSKKSSKRDSKILEHV
>OMNI|NTL02CP00751/9-493
LEDLVHQQVISPLDIAFAS..............KHIS....SDFEESFVFLAVSSALWRYGHPFLSLEENRIRPSLGGIS
ETDL....................YRGFHNLPKEVRDKLF.................VVVSGRLYLRSLYTIRSKLLDKL
SLLCSATPNYFP....................................................................
.PSIDSSILSEEQN.........FIFNKITQGCFSIVSGGPGTGKTFLAAQLILSLVKQQPK.....LRIAIVSPTGKAT
SHIRQILMKYN..............IFDDMVLMQTVHHFLQEYA.........YRRYNSIDVLLVDEGSMVTFDLLYSLV
QTLQGYEKDKKLYTSSLIILGDTNQLPPIGIG.VGNPLQDLIG................................Y.FHE
NTFFLKTSHRAKTG.VVDQLTQSVL..............................R.GEMISFSPLPSISSAIEVLKNRF
VKS..LRQSE.................................ARLCVLTPMRHGPWGVLNLNTMIHQRLAR......SD
PD.....LRIPIMVTSRYETWGLFNGDTGLLCL.............KTQKLHFPQH....EPIDSRALSQYVYNYVMSVH
KSQGSEYDEVIVIIPKG.SEVFGVSILYTAITRAKYRVSVWGDPE.TLHKIIKKSNY.........
>OMNI|TC0021/11-497
LQSLLAQHILLPFDLVFAQ..............KHLAQT.SSSNREAEAFLVVASALLRCGYPYFTIHKATISPTLPGIS
NRLL....................FQWFQALPSDVKATLF.................EVCDDKIYLRSLFLLREKVFQKL
HTLAEAVPRTSL....................................................................
.IFENVSQLSEEQN.........AVLGNVLNSCFSLVCGGPGTGKTFLAVQMIRLILSQIPS.....AQIVVASPTGKAA
AHLHSVLSSQE..............IIGASVEVVTIHKFLKDVN.........NGRS.PVDLLLIDEGSMVTMNLLHGLI
KTIRGEIREGKLFADRMVIFGDVNQLPPIGIG.VGNPFHELVS................................E.FTQ
QAFFLSTSHRAKHK.ELQELAKSVL..............................H.KQPIPFQPLPSRKEAIRRLSDAF
VQT..AKAG..................................ISLCALTPMRQGPWGFLQLNRLLFNEMQE......KH
PQ.....APVPIIVTERYETWGLTNGDTGILDP.............LTQQLHFMNG....EILRKEDFPYYSYNYVMSVH
KSQGSEYDRVIVILPKG.SEVFDSAILYTAITRTKQCVEIWADKE.TLDMVISKKGRY........