HMM Seed Alignment: TIGR01445
Download Alignment>SP|Q58524|HELS_METJA/338-409
CLNANTEILQE-SG----FRKITELNKDE---------------------------------------KVFAL---CG--
KEIKPVDG----WKVHKTPQHEYNIVVKTVN-----GLEITTTPNHIFLV
>OMNI|NTL01PA01588/1298-1407
CVVGETRILTP-EGY----IKAEELFKLAKERGK-MEAIAVEGIAEGGEPYAYSLEILLPGD-KQVKYETVHG---NA-V
EVADPVSVPAYVWK-VGMK--EV-ARVRTKE-----GYEITATLDHKLMT
>OMNI|NTL01PA01588/723-793
CFTGDTRILTE-KGL----IPIEEIVHETGKKPK-----------VVTHAGLKDI------------IETYD----N---
----------------GEM--EV-FRVTTED-----GYELKVTGDHKFLV
>OMNI|NTL01SS03159/775-850
CLSFGTEILTVEYGP----LPIGKIVSEEIN-------------------CS---------------VYSVDP---EG--
RVYTQAIA---QWHDRGEQ--EV-LEYELED-----GSVIRATSDHRFLT
>OMNI|DR2374/525-593
CVTADTWVSTA-FGA----RQVQDLI----------------------GKDFCA-TVN---------GESFSA---RG-G
-----------FWL-TGVK--SV-LKVTTRR-----GYELRLTGNHQLLK
>OMNI|NTL01MT00648/266-334
CVSGDTIVMTS-GGP----RTVAELE----------------------GKPFTA-LIR---------GSGYPC---PS-G
-----------FFR-TCER--DV-YDLRTRE-----GHCLRLTHDHRVLV
>OMNI|NTL01PH01142/347-417
CVSGDSKVLTE-KGP----VEIRHLNSGMI----------------------VG-------------INGFKS-------
RFVKFQELH--QVKYQEYG-----VKIRTQL-----GFEVKCTREHRFLT
>OMNI|NTL01PA01742/241-333
CVDGDTLVLTKEFG----LIKIKDLYKILDGKGKK-------TVNG--NEEWTELERP---------ITLYGY---KD-G
KIVEIKATH--VYK-GFSA--GM-IEIRTRT-----GRKIKVTPIHKLFT
>OMNI|NTL01TA00005/236-329
CVSGDTPVLLD-AGE----RRIGDLFMEAIQDQKN-------AVEIGQNEEIVRLHDP---------LRIYSM---VG-S
EIVESVSHA--IYH-GKSN--AI-VTVRTEN-----GREVRVTPVHKLFV
>OMNI|NTL01TV0054/236-330
CVSGETPVYLA-DGKT---IKIKDLYSSERKKEDN-------IVEAGSGEEIIHLKDP---------IQIYSY---VD-G
TIVRSRSRL--LYK-GKSS--YL-VRIETIG-----GRSVSVTPVHKLFV
>SP|Q58445|RPA1_METJA/460-537
CVDGDTTVLLD-GKL----IKIKDLEDKWKD-------------------VKVLT------------SDDLNP---KL-T
SLSKYWKLN---AD-EYGK--KI-YKIKTEL-----GREIIATEDHPFYT
>GP|3025639|gb|AAC13134.1/381-463
CVTGETLLLTE-NGY----EKAADLYKKQND------------LKVVIDNRTKD--------------FAVGS---KG-T
TIVDAIPMQ---LT-KKDA--EI-FKVKTKQ-----GYEIRATEWHKFYV
>SP|Q57532|GYRA_MYCLE/131-209
CVSGNSLVRLL-FGKS---IRIGDIVTGAQFN------------------SDNP--ID---------LKVLDR---HG-N
PVVADY-----LFHSGEH---QT-YTVRTTE-----GYEITGTSNHPLLC
>SP|Q57962|PPSA_METJA/411-493
CIEGDAKILTD-RG----FLKMKEVYKLVK----------------------NGEK-----------LKVLGLN-AETLK
TEWKEIID---AQKREARRY-EIGVYRKNKNT----KDTIKITPDHKFPV
>SP|Q58454|YA54_METJA/261-341
CFHPDEVLFID-RGRGLECITFKELFELEDKDN----------------------------------VKILSF---DGEK
LSLKKLKL---ASKRYYND--DL-ITLRFNL-----GREIKITKDHPVVI
>OMNI|NTL01PA00120/955-1051
CFPGDTRILVQIDGVP-QKITLRELYELFEDERYE---------NM---VYVRKKPKRE--------IKVYSIDLETG-K
VVLTDIED---VIKAPAT--DHL-IRFELED-----GRSFETTVDHPVLV
>OMNI|NTL01PA00558/98-177
CLAPGSKVLTE-HG---YWLKVEELPEKFK---------------------LQG-------------VKVYNLD--EG-H
NDTSNVAF---VAEREVETGEMA-VRVTTES-----GRIIEGSEDHPVLT
>SP|Q58095|Y682_METJA/98-173
CLTSNSKILTD-DG---YYIKLEKLKEKLD---------------------LH--------------IKIYNTE--EG-E
-KSSNILF---VSERYAD--EKI-IRIKTES-----GRVLEGSKDHPVLT
>OMNI|NTL01PA01588/302-404
CIDGNAKIIFENEGEE-HLTTMAEMYERYRHLGEF---------YDENYNRWGIDVSSV-----PIYVKSFDP---ET-R
RVVKGRVRA--IWKYELGEE-IPKYEIRTHK-----GTKILTSPWHPFFV
>OMNI|NTL01HS01672/283-373
CVRGDTTVALA-DGS---EREIRDLVEANLDDPRP---------------VDDGV---WDGV--DVAVPSLAA---DG-R
LVQR-RATK--VWKREAPE--TM-YRVRTAA-----GHRLTVTPSHPLFV
>OMNI|NTL01PA01421/335-432
CVDYETEVVLG-NGE---RKKIGEIVERAIEEAEK---------NGKLGRVDDGFYAPI-----DIEVYSLDL---ET-L
KVRKARANI--AWKRTAPK--KM-MLVKTRG-----GKRIRVTPTHPFFV
>OMNI|NTL01HS01799/926-1025
CFHPETNVWFRDESGEWHHDPIETLVEARLD-PDT-----------ADEDDFGALVQALDG---DVFVPSVTE---DG-E
ETLQ-RVEA--VSKHPAPD--HL-LAVETKR-----GRELTVTPDHSMRR
>OMNI|MJ1512/867-943
CLTPDTYVVLG-DGR---IETIEDIVNAKERNV-------------------LSLD-----------LDNLSI---KI-D
TAIK-------FWKLRYNG--NL-SKITLSN-----NYELKATPDHCLLV
>OMNI|NTL01PH00825/954-1028
CVTPDTLVSLS-DGR---IIEIREAVENSEESL-------------------LG-------------INGLKP---KE-A
KALK-------FWEIDWDG--PI-KVIKLKN-----GHEIKATPDHGLLV
>GP|5457543|emb|CAB49034.1/62-146
CLTGDAKVIA--NGE---LTTIGELVERISN-------------------GKLGPT-PVRG------LTVLGI---DE-D
GKLVELPVEY-VYK-DKTS--EL-VKIRTRL-----GRELKVTPYHPLLV
>OMNI|MJ1422/54-138
CLTGDTKVIV--NGE---IREIGEVIEEISN-------------------GKFGVT-LTNN------LKVLGI---DE-D
GKIREFDVQY-VYK-DKTN--TL-IKIKTKM-----GRELKVTTYHPLLI
>SP|Q60348|Y043_METJA/129-198
CVPPDTLLILE-NG-------FKRIVDIK-----------------------VG-------------DKVLTH---EN--
-RFKKVEK---VYKRRYIG--DI-IKIKVRYF----PEEIILTPEHPVYA
>SP|Q58815|YE20_METJA/75-146
CLHPDTYVILP-DGR------MKKISEID---------------------ED----------------EVLSVN-FED-L
KLYNKKIK---KFKHKAP---KILYKIKTAF------SELITTGEHKLFV
>OMNI|NTL01PA01421/526-617
CVAPETLIITE-NGT----KEIGEVVERWMKELG----------EIEY---DDGI--SYSPA----FEKVASLN---G--
GKVKMLPVRR-VWKLRSPG--KM-IKIRSES-----GKQITVTPETKLLT
>OMNI|NTL01PH00628/530-620
CVAPDTLINTD-NGR----VEIGKFVEEWMKEVG----------EIS----EEGI--SYAPC----FRKVETFK---D--
GKIVESPIRR-VWKLRAPK--KL-VRIKTEN-----GRSIALTRETKLLT
>OMNI|NTL01SS01142/437-516
CFSGDTLVALT-DGR---SVSFEQLVEEEKQ-GK----------------QNFC----YTI------RHDGSI---GV-E
KIIN-------ARKTKTNA--KV-IKVTLDN-----GESIICTPDHKFML
>SP|O58001|RADA_PYRHO/153-249
CFARDTEVYYENDTVPH-MESIEEMYSKYASMNG-------------ELPFDNG-YAVP--------LDNVFVYTLDIAS
GEIKKTRAS-YIYREKVE---KL-IEIKLSS-----GYSLKVTPSHPVLL
>SP|O58221|LONH_PYRHO/211-308
CFSGEEVIIVE-KGKDRKVVKLREFVEDALKEPS-----------GEGM---DGD---IKVT-----YKDLRG---ED-V
RILTKDGFVKLLYVNKREGKQKLRKIVNLDK-----DYWLAVTPDHKVFT
>OMNI|NTL01PA01126/21-111
CLLPDEKVVVPSVGFVT-LKELFETASKVVERDD--------------EKEIRELDER---------ITSVNG---DG-K
TGLVKASY---VWKVRHKG--KV-IRVKLKN-----WHGVTVTPEHPFLT
>SP|O58822|IF2P_PYRHO/23-113
CLLPEERVILPDYGPIT-LEELFNMTKETVFKDE--------------EKEVRKLGIR---------MPVAGV---DG-R
VRLLEGPY---VWKVRYKG--KM-LRVKLKD-----WHSVAVTPEHPFLT
>SP|Q57710|IF2P_METJA/31-120
CLMPHEKVLT-EYGEIK-IEDLFKIGKEIVEKDE--------------LKEIRKLNIK---------VHTLNE---NG-E
IKIINAPY---VWKLKHKG--KM-IKVKLKN-----WHSITTTPEHPFLT
>OMNI|NTL01SS00969/130-202
CLTGDSQVLTR-NG-------LMSIDNPQ--------------------IKG---------------REVLSY---NETL
QQWEYKKVL--RWLDRGEK--QT-LSIKTKN------STVRCTANHLIRT
>SP|P35901|RECA_MYCLE/206-288
CMNYSTRVTLA-DGST---EKIGKIVNNK---------------------MD---------------VRVLSY---DPVT
DRIVPRKVV--NWFNNGPA-EQF-LQFTVEKSGSNGKSQFAATPNHLIRT
>OMNI|NTL01ML0595/202-273
CLTADARINVK--GK-----GLVSIADVQ-----------------------PG-------------DEVFGVN--IG-C
ELERGK-----VLAKVASGT-KPVYEMHVA------GRALEATGNHQFLV
>OMNI|MJ1422/1125-1202
CLTGDAKITLP-DERE---IKIEDFIKMFE--------------------ERK--------------LKHVLNR--NG-E
DLVLAGVK---FNSKIVN-H-KV-YRLVLES-----GREIEATGDHKFLT
>GCBORF0889/390-463
CVTGDTLICLAD-GRR---VPIQDLVG-----------------------HS---------------PEVIAVD--DK-G
RLVCAKSEV--IWKVGER---SV-FEIKLAS-----GRSIKATAEHRLLA
>SP|Q55418|DNAB_SYNY3/381-457
CISGDSLISLASTGKR---VSIKDLLDE----------------------KD---------------FEIWAIN--EQTM
KLESAKVSR--VFCTGKK---LV-YILKTRL-----GRTIKATANHRFLT
>SP|P71715|DNAB_MYCTU/400-476
CLTASTRILRADTGAE---VAFGELMRSG---------------------ER---------------PMVWSL---DERL
RMVARPMIN--VFPSGRK---EV-FRLRLAS-----GREVEATGSHPFMK
>SP|P26345|RECA_MYCTU/252-328
CLAEGTRIFDPVTGTT---HRIEDVVDG----------------------RKP--------------IHVVAA---AK-D
GTLHARPVV--SWFDQGTR--DV-IGLRIAG-----GAIVWATPDHKVLT
>SP|Q58446|RPA2_METJA/76-173
SLPYEEKIIIK-EGEFIKPVEIGKLVDEMIERFG-----------FEK--IGNSE--VCDLP---IDIYALSLD---Q-D
EKVHWKRIIS-CIRHKHNG--KL-IKIKTKS-----GREITATPYHSFVI
>SP|Q58191|Y781_METJA/405-504
ALAYDEPIYLS-DGN---IINIGEFVDKFFKKYKN-----------SIKKEDNGFG--WID-IGNENIYIKSFN---KLS
LIIEDKRILR-VWRKKYSG--KL-IKITTKN-----RREITLTHDHPVYI
>SP|Q58192|TF2B_METJA/100-196
SVDYNEPIIIKENGE-IKVVKIGELIDKIIENSEN----------IRR----EGIL-EIAKC---KGIEVIAFN---S-N
YKFKFMPVSE-VSRHPVS---EM-FEIVVEG-----NKKVRVTRSHSVFT
>SP|Q58242|Y832_METJA/1059-1159
SLPYDEKILIF-ENNEYKLVKIGEFVEKYLNRYKD-------RAITY--GDNNIE-VYIKD------ENIYAPSFD-K-D
GKIVLKPITH-AIRHRGK---EI-YEIELES-----GKKVRVTGDHSVFT
>SP|O67475|RIR2_AQUAE/230-304
CFIEGTEVLTK-RGF----VDFRELREDD--------------------LVA---------------QYDIET---G---
EISWTKPYA--YVERDYEG--SM-YRLKHPKS----NWEVVATEGHEFIV