HMM Seed Alignment: TIGR01444
Download Alignment>OMNI|NTL02SS0745/47-180
VVIDAGANIGLFSILASFKVKE.KGRVIAIEPEPNNLKILKQNVELNGLNN..VIIIPKALYDK......PGKRVNMR.G
EGVGAFVSED..................GEGT..............VETTTLDVIAEENR...LRPRILKMDIEGAEGKA
LLG..SINTVKYLELIEMEVH
>OMNI|NTL02SS0766/39-162
TVLDAGAFIGDFTVKVARKAKE....VVAVEPLPWAFKLLKENVEINNLKN..VVLVNKALYDV......DGVKLKIV.D
EGTGSRIGES..................G.................VEVDSVSVNSLG......KFSVVKMDIEGAEGRV
MK...SGEWLDYVKQIAVELH
>OMNI|AF0601/169-307
TVLDIGAFIGDSSIWFIHKGAK...KVLAYKPNPKLYPILKKNIEINNLSNK.IVPENYAVGCSKG....KAKMKVPWYG
AGNIYGLFESEY..................SEEV.........E..VEIVSIDEILENNN..ID...IIKLDCEGCEYEI
LDYLVKSNWLDNLEGVVFECH
>OMNI|NTL02SS0751/130-264
TVIDCGAAIGDSAIYFSLKGAK...RVIAIEAYPKIAKIAEENVKLNNFKN..IQIVNAACG.TDG....IVTV.NPRLG
G.G.PTPLM...................SSNNGY.........T..VPSFSLQGLIKNFQ..VEKGSVLKLDCEGCEYEF
LLNADSS.TLEYFDQIIMEYH
>GP|13814866|gb|AAK41838.1/197-332
EVIDIGANIGDSAIYFALKGAS...HVYAFEPLPLVYKAALQNIKLNNLENK.ITLINGAVGSKEG....KVKV.PLNIN
LED.SGGFY..................ITNQGDV.........E..VPLFSFDDIVKNMV..KDP.YLLKMDCEGCEADI
ILN..SD.SISYFEKILVESH
>OMNI|NTL02SS0758/117-265
VVIDVGASNADSSIFFATNGAE...KVIALEPFPESYELGKYNIKINNLDNK.VILLPYALTNYEGYVDFIISSDNPNVN
TVSPSTQVMGLLG..............IKFDQKI.........K..VPTTTLASLIQKYN..IDRVYLLKMDCEGCEYAI
LRDLPAE.VLNKIENIILEFH
>OMNI|NTL01PH00399/151-287
TVLDVCGFIGDSALFFALNDAK...KVVSFEPQREAYELLVENVKLNEFDNI.IVAINEAVGEKDS....MVEFLIPDEF
SLGASRYIRAG....................KKT.........S..VKVRDIIRVMNEFK..PD...IIKLDCEGCEYGI
IDKLLKTGRIYDVEGLVVEFH
>OMNI|NTL01PH00405/167-298
TVIDIGGFIGDTALYFYSKEAR...KIVSFEPSKKNYTILIKNITLNNIKNV.IP.INAGVWDEN......TKGIITNPA
PT.AYR.VKEE....................SKG.........D..VALVSILDIIDSYR..PD...IIKMDCEGCEYKV
FEKLLETGYIYDVPEYVFEAH
>GP|13815022|gb|AAK41970.1/83-216
KIIQAGAYVGETALYYAKRGAY....VYAFEPQLDCYNIALTNLKLNPELASRVVLRNWAIG.EDG....EIEFPNTRCN
GGTSYFDSYK....................DRIR............VRSVSISTVLEEFN..ISQPDILDLDIKGGEFRV
IN....DKSIQKFSIVRIEYN
>OMNI|NTL02ML4391/48-192
LIIDAGANVGDVTAYFLGKGMR....VIAFEPDPTALAILQKRFSGNDK....VTIENKAVGAKAG....HAPFFQTAAV
RKGAIYQTEWS.................SLDRRD.......VHDDAITSVEVVDLVAYINALPQKVSILKLDIEGTEAEV
LEAILDAGVETKIDLIVAETH
>OMNI|NTL01SS02490/216-364
RTIDVGANRGDVSARLLQTGY....EVYAFEPFPPVLAKLQERLGQNSN....FHALGYALGSANETRNLHLVVDQTEDK
IFDDATFYSS...................LTRHSLTEGLVFHDSITVEVKTIASLHEAGT.LPDDIGLVKIDTEGFDLEV
IKG....MGNFRYPVVLAEFW
>GP|17131953|dbj|BAB74558.1/97-244
DIIDVGANIGFYSVLCAKKINQ.RNRVLSIEPTKNAFEKLIHNLELNEVN.LKVISYNGVASNIIG....EVEINTVIGK
EEYSSLGAMSHP................SISRDS.......YTSCKVESSTIDFLVEKYS...LKPGFIKIDVEGAENLV
LEG.CKKVLTENHPVILMEVS
>OMNI|VC0258/23-166
TYIDIGANVGTFCGIAARHITQG..KIIAIEPLTEMENSIRMNVQLNNP.LVEFHHFGCAIGENEG....ENIFEVYEFD
NRVSSLYFQKN................TDIADKVK........NSQVLVRKLSSLDISPT....NSVVIKIDAEGAEIEI
LN..QIYEFTEKHNGIEYYIC
>OMNI|NTL01HS00044/88-223
DVIDLGAGIGFTACVADRKLNQ.GRDVIAIEANPKLESSIKYNAGLNGSS...VKVISAGYSPSVG....TIEISDKDSY
RSNSVYENTS.......................D.........EVEVETTSLVEITNEFS...IDSFSLISDIEGSEAEL
IQE..IELIKSKCHTIIIEIH
>OMNI|NTL01SMB00775/48-185
TYIDIGGWIGVTPYWAAQAADN....VIVVEPDPVCFGILTEMKGANTG...EVKLVNAALSQDE.....RLVLNSVGGG
FGSSETSALI..................A.DDTG........MTIEAKTITIPELQAMAR...TERLCLKIDIEGYEYKV
LDQFRAID.RKRTAGVLLAVH
>OMNI|NTL02ML1565/139-292
LFIDCGSNIGQAYKFFSRYYTPDYYDYVLVEPNKNCLEHLHSLRSENVA....IEVVAKAASVKDGYAEFLGPPGRSDLT
YEGCSIVPSHNG................GLYPSQR......FTPELVETFSLSQMIQAKRG.LYEVIVLKLDVEGAEYEI
LDDLIRSGLHRDLHATYVEFH
>OMNI|NTL01SS01874/65-204
VVFDVGANFAGLTTVMSRMVGP.KGIVCAFEASPRIIDKTQRNLVLSGCNN..VQLFHHAVYSTSH....ETVKIYLG.S
HLNDSIYSEN..................GEGSS........YE...VKTIALDDFVEHTK...LVPNLLKMDIEGAEFDA
IKGL.EKTLVSAKPHLVLETQ
>OMNI|NTL01SS00907/116-266
VFFDVGAAYGVISIPLAEIVGN.NGHIYAFEPARQTRQSLEQIVKGNHLEN..ITVLPLAIADETG....EAEFIEYS.T
DNRFSWAADT..................STLAKDVEPSLDNYATYAVEITTIDKFAGENN...LSPKAIKIDIEGFELYA
LQGA.METLKTCRPYLCIDIH
>OMNI|NTL02MT02949/130-268
CILDVGANVGIHSLAWARLAP.....VVALEPAPGTHSRLEANVAANGLQDR.IRTLRTAAGDAVG....EVDFFVA..A
DSAFSSLNDT..................GRIRIRER.....TR...VPCTTLDALAAELP...LPVGLLKIDVEGLERAV
IAGA.AELLRRDRPVLLVEIY
>GP|8247648|emb|CAB92986.1/74-217
GFVDVGANIGVFSVLAARLVGE.SGRVVAIEASADVHRRLVGNARLNGLGN..IRALNAAVSDRTR....TLTFALA..S
SRNTG.ANSI..................VPYDGPVE.....SSFR.TEARPLPDLLDTAEI..ATVRVIKIDVEGAEGSV
VRGL.APMLGALRPDAEIAVE
>OMNI|NTL02MLB0185/80-217
TFVDVGANVGQLSLVAARRVTS.SGRTIAIEAHPRTCNFLRGNVRLNGLP...IEIHNVAVGSECG....ELFFTNF..R
SDDMNFAYAA..................SPRNG........SALR.VPVATLDSIIGE.....RPVDLLKVDVEGFECDL
LRGA.AQTLHNCRCLYIEDSE
>OMNI|NTL03PA00344/26-167
FYIDVGANHPRIDSVTLAFYERG.WRGINIEPLPHLHRELERE.RPEDLN......LNLAIGEREG.RATLYEMAASGLS
TLDPELARQR..................QAEGCT.......ATPREVKVSTLDAICAAHVEG..PIHFLKIDVEGLEGAV
LRG...LDLNRWRPWLILAET
>GP|15824167|dbj|BAB69329.1/56-224
TLLDIGANVGLMSVHCARACPG..VRVVAAEPAPDLHACLRRNLADHAAPG..WQAECAAVSDRPG....LLRFTYYPDA
PGNSGLYADPRADDEITLAFLRNSGVDAEDAEELVEG.LHEGVEFTVPAVTASDLVRRHG..IERVDLLKVDVERAELDV
LLGL.EEAHWSLVRAVVAEVH
>GP|15077459|gb|AAK83186.1/27-165
GCLDIGAGGGEILTHMRRAAPR..GRHFAVEPLPQYAEQLRRDFPEVTV....WQAAAAATPGRD......S.FVHVVSN
PGYSGLRRRP.................YDRADETLE.......EIAVDTVRLDDVVPED....ARVDLVKVDVEGGEVGA
LRGA.AELLRRQSPVVVFEHG
>OMNI|NTL02SS1728/100-229
IFVDVGAYIGSYTIRAG..IRG..ANVIAFEPNPVSFKILELNVKENEIESK.VKLFNNAVWSRSG....KIELFAN..N
DMTSAYNNKG....................NKIV............VNAIALDSLNLKR......VNLLKVDVEGAELEV
LKGA.MNTLDVT.DKILIEVR
>GP|14021529|dbj|BAB48141.1/193-329
VFVDIGANIGNHSIFMSKFCSP..SEVIVFEPNPKAIEILKLNVLLNACANINTSYLGLALGSKAA....QMRVFSPDPN
NMGRAQMLDD....................DDGN............VKCVAGDLLLQQKP.....VGLLKIDVEGSEFEV
LRGM.QGTIETWRPNILIEVW
>GP|13183742|gb|AAK15333.1/205-334
HYVDIGAFDGDTVKKFMLAARHRYASIHAFEPDPANYQRMHAALNGHAR....LKLHNLAVSDDEG....YLAFAAHG..
TMGSRVQADG.................................AVQVRCVRLDDVLDRMS.......LLKMDVEGHEARV
LRG.AARLIGECRPRMAITCY
>OMNI|CC1004/246-386
VVADVGANIGLLTLVMAWATGP.GGRVIAFEPEAIPRSNLEKMKHLNGLS..WVEVRDQAVGERAG....RLTFHVSDII
G.HSSLYALP..................DAEEAR.........TVEVEVVRLDDVAPAKR.....LDVVKIDVEGAELDV
LAGMKGVIAKNPDLAIIAEFG
>GP|13022100|gb|AAK11637.1/46-184
TVVDVGANIGIYTRMFSALTGA.AGHVHAFEPAPANFEKLEAT..VNGLPN..VSLQHAAVGAGNG....TIKLYVSNEL
NVDHRTFDSG...................DGRAS..........IDVPLVRLDDYFSPGQ....RVDFIKIDVQGYELSV
LQGAERVLRENRDIRIFMEFW
>OMNI|NTL01HS00824/73-214
VLWDIGANIGTHSCYIGQKAG....QTIAIEPFPDNAQRARENCSLNDVD...ATVCEYAVGAHEG....EATLAVPDTD
DNVVGVGTFS..................LQTDARN......AQSVDVDVVPGDQIIQNRG..VALPDVIKIDVEGGEADV
LRGFDRG..LQNARAVLVEVH
>GP|13957625|gb|AAK50580.1/140-284
VVVDVGANVGMASFAAAVMGFR....VVAFEPVLENLQRICDGVYLNRVQD.QVVVYHAAASDRVG....NITMHKVIGR
LDNSAISATG................AKLAFKAN......EEIAVEVATIPLDEVILDAER....VVLIKIDVQGWEYHV
LRG.ASKLLSRRKGDAPYLIY
>OMNI|NTL01SS01702/44-194
TIIDIGANKGQFAKKMRRYFPQ..AQIFAFEPLPLPYQQLQQWGDRQQNR...VRTFNLALGDRVD....ELEINSHVLF
TASSSLLPTT..................KLCESLYPM.VREQEKIIVHQSTLDREMEQFVGKLLPELLVKIDVQGYEDRV
IRGG.EKILR.QAKACILEIS
>GP|17131952|dbj|BAB74557.1/56-202
VVYDIGAAKGTVSSCLAKLPNV..SSVHAFEPLIDVFEQLEIR.MKPFHK...VNCHNVALGNKEG....CFPMYVNN.W
TACSSFLPTS..................KYLKEQISG.MGNSYKIPVQVSCLDKYVEENQ..LPKPNVVKIDVQGFEKKV
IEGG.INTVR.HSKYCFIEMS
>OMNI|NTL02MT02950/42-191
VVFDVGANSGQYAAGLRRAAYK..GRIVSFEPLSGPFTILESKASTDPL....WDCRQHALGDSDG....TVTINIAGNA
GQSSSVLPMLKSHQN.............AFPPANYVG......TQEASIHRLDSVAPEFLG.MNGVAFLKVDVQGFEKQV
LAGG.KSTIDDHCVGMQLELS
>OMNI|NT01MC3907/89-232
VCLDIGSHRGYMAGIMALHGAA...QVHCFEPMPDNITHLQRLQQLNPELP..LYVQPYAMGNRQGDARFAIMPESSMGK
LSDSSFQVEA..................AHVTEIN...........VAVRRVDDLVAEG..VVMIPQLIKVDVEGAELEV
LAG.AQQTIEQNRPIMVIEVH
>OMNI|NT01MC3820/16-158
IVFDIGAHIGDKAAWFAQRGLE....VVCVEPQPEMVKQLTERFQNTPN....VSIKGVGLGSKRG....LLQMSIASKT
PTLSTFAPHWKAG...............RFVNCEWDS......STNVEIILLDDLVNEFG....VPRYCKIDVEGYEREV
IKG.LSQRIGIISYEFTNEYM
>GP|13661984|gb|AAK11638.2/75-223
IVLDIGANVGSHTLPLAELVGG.TGKVISFEPTAHAFGKQKTNITLNPILAQRIDAHQMMLMASASETMPEAVYSSWPLE
VAEDLHSEHHG.................RLMSTQG...........ARLNTLDEILRELG..VDKVDFVKLDVDGNELEV
LLG.AKATLEEFKPRIMLELA
>OMNI|CC1108/24-161
TMLDIGAHVGSFTRGFLQVFPD..CAPTLVEPNPFCEPDLAAMPFERHMVAASHENGEAELFLTKE....WLQSTGTSLY
RENTDFFRDD..................VMIRR............VVPKARLDDLLAGRR.....FDFVKIDTQGAELDV
LRG..GETVLRQADYILLEIS
>SP|P55473|NOEI_RHISN/49-201
VILDIGCNDGSDARRFLQLRPK..AQLFCFEPDPRAAARCRENMGPLDR....MRLFEVAISDRNG....RIDFHPSNGD
GDAKEWDLSG..SIR............QPKNHLSEYQWVRFDGPISVETRRLDDWCSEAG..LESIDLIWMDVQGAESDV
IAG..GKETLTKTRFIYTEYS
>OMNI|NTL01SS02489/813-953
FVMDVGASHGIWSHTASQLFPE..ARFILIDPLINRYEQAARNYYLKNIPK..AKFLEIAVSNESG....QLSFQVSPDL
YGSSLLTPADFR................DYETVT............VAVKTLDQVAEEEN..LQGRGILKLDVQCAEHLV
LAG..ANTFLEQVDLVMAELS
>OMNI|NTL01SS01294/41-184
VIFDVGASNSGWSYYIKQVVTE..ADFYLFEPLVDHVPDYQGLMEETLRVYPSFHLYKYALGDRDG....TITVNVFDDP
ASSTTLPMTE..................GGPSIN.........AVQVPLLTLDSALVKLG..LPQPQVIKIDTQGNELSI
LRG..AAQTLAKVDVLFLECW