HMM Seed Alignment: TIGR01416
Download Alignment>OMNI|NTL01AA00033/3-172
ASRRDFISIGIGALGAVGGLGALYALVRVMLEPSEIAALGAKTEIDVSKIQPMQVRVTSWKGKTLFAIRLPKDFKPEGYT
LKKGA.LNSK............GTTNY....EILKGHDVF.ALVGVCTHLGCIP...LWKPQGEGGIN....KPVFHCPC
HGGLYTPYG.DVIGGPPPRPLFIPPQKLEG.NKLIVG
>OMNI|HP1540/4-154
IQRRDFLGMSLASVTAIGAIASLVAMKKTWDPLPSVVSAG.FTTIDVANMQEGQFSTVEWRGKPVYILKRSK...KEGFN
EKR............................DFKVGESVFTTAIQICTHLGCIP...TYQDEEKG..........FLCPC
HGGRFTSDGVNIAGTPPPRPFDIPPFKIEG.TKITFG
>OMNI|NTL01CJ01129/5-154
ESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG.FTTVDLSGMQDGELRTIEWRKKPIFILKKDA...SMPKD
EKR............................DVVVDNAAYTVVIGLCTHLGCIP...AYQPSEQL..........FKCAC
HGGEFDTSGKNVFG.PPPKPLEIPPFKIDG.TKLVLG
>SP|Q9ZDQ5|UCRI_RICPR/12-177
TTRRDFIVLTASSVAAVGAACAFWPIIDSFNPSADVLAL.SSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARA
VKMSE.LIDP............ERDEV...RVKA.GHDNWLVTIGICTHLGCVP....LS.HKGE.......YNGWFCPC
HGSQYDSSGRVRKG.PAPLNLAVPPYIFISDKKIRIG
>SP|P81380|UCRI_RHOVI/9-175
ATRRDFLYVATAAVGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEA
ADVGA.LIDP............QPDSA...RVKP.GKAEWLVVYASCTHLGCIP....LG.HQGD.......WGGWFCPC
HGSQYDASGRVRKG.PAPTNLPVPPYEFVDNTKIRIG
>SP|P51130|UCRI_BRAJA/10-176
PTRRDFLFVATGAAAAVGGAAALWPFISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARA
VNVAS.LPDP............QSDEA...RVKS.GHEQWLVVIGICTHLGCIP....IA.HEGN.......YDGFFCPC
HGSQYDSSGRIRQG.PAPANLPVPPYQFVSDTKIQIG
>OMNI|CC0472/13-178
PSRRDFIHIAAIAAAAGGAATLAWPFIDQMNPSADTLAM.ASTEFDLTKVPEGQQVTLKWRGKPLFVRNRTKGEIDKAVA
DDTVS.MKDP............QKDAD...RVKP.GKAQWLVLIGSCTHLGCVP..T.FG..GGD.......FGGWFCPC
HGSHYDTSGRIRKG.PAPLNLAVPEYEFLSDTKVKIG
>GP|46384|emb|CAA39058.1/15-183
SSRRDFLIYGTTAVGAVGVALAVWPFIDFMNPAADTLAL.ASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARA
VDPAS.LRDP............QTDEA...RVQ...QAQWLVMVGVCTHLGCIPLGQKAGDPKGD.......FDGWFCPC
HGSHYDSAGRIRKG.PAPLNLPVPPYAFTDDTTVLIG
>OMNI|NT01MC1738/9-174
ENRRDFLIMATGAVGAVGVAGAAWPFIDSWSPSADVLSL.ATTEVSVAAIAEGQMITTMWQGKPVFILHRNAEQIERAKT
DDKATDLVDP............QADAD...RVK...KDEWLIVLAICTHLGCVP..QPIG..TGD.......FGGFLCPC
HGSHYDTSGRIRKG.PAPRNLEVPYYEFKDDETVIIG
>SP|Q02762|UCRI_RHOSH/9-187
GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQAL.ASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRS
VQLGQ.LVDTNARNANIDAGAEATDQN...RTLDEAGE.WLVMWGVCTHLGCVP....IGGVSGD.......FGGWFCPC
HGSHYDSAGRIRKG.PAPENLPIPLAKFIDETTIQLG
>GP|4104452|gb|AAD02046.1/9-187
PTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAA.ASIEVDVSSLAEGASLTVKWRGKPVFIRNRTAKEVEESKT
TALGD.LKDPNARNANLPTDAEATDLA...RSAGEGKENWLVMIGVCTHLGCVP....LG.ESGA.......FGGWFCPC
HGSTYDTAGRIRSG.PAPENMHIPQYAFTSDTVIRIG
>GP|6492247|gb|AAF14234.1/14-192
PTRRDFLYLTTGMAGAVGAAAVAWPFIDQMRPDASTLAL.ASIEVNVAALQPGMSLTVKWRGKPVFIRNRTPKELEEADA
VALSD.LKDPVARNANIAADAEATGLD...RSAGEGKENWIVMIGSCTHLGCVP....LG.QAGD.......FGGWFCPC
HGSHYDTAGRIRKG.PAPQNLAIPTFAFASDTVIRIG
>OMNI|NTL02ML2092/9-186
PNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLAL.ASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEKEMKDGEA
VNLSD.LKDPIARNANLPADAPATDAN...RTTP.GKEAWMVMVQVCTHLGCIP....LG.QEGD.......FGGWFCPC
HGSQYDTAGRIRKG.PAPENMAVPVFKFISDTKILIG
>OMNI|NMB2053/8-191
NGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKG
LNGE..LTDPNSD......AEQQPEYA..KNETRSIKPNILVAIGICTHLGCSP...TFRPDIAPADLGADWKGGFFCPC
HGSKFDLAGRVYKGVPAPTNLVVPPYKYLSDTTILVG
>OMNI|NTL03PA04432/8-191
AGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEMLDALPS
LEGQ..LADPDSK.....A.SEQPEYV..DPKLRSIKPELAVIVGICTHLGCSP...TFRPEVAPADLGPDWKGGYFCPC
HGSHYDLAGRVYKGQPAPLNLPIPPYTFDADDVITIG
>OMNI|VC0573/8-190
QGRRRFLTATTAVVGGLGAVAVAVPFIKSWNPSAKAKAAGAPVEVEISKLEEGQMVRVEWRGKPVWVVRRSQAVVEGLKS
HENQ..LRDPNSD......ELQQPNYA..QNPYRSIKPEYFIAVGICTHLGCSP...TYLPDSFSEQV.QGVKSGFFCPC
HGSKFDMAGRVFQAVPAPLNLVIPPHMYLSDTRIVIG
>SP|O31214|UCRI_CHRVI/18-201
KMRRRVLVAATSVVGAVGAGYALVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSS
NDPK..LVDPTSE......VPQQPDYC..KNPTRSIKPEYLVAIGICTHLGCSP...TYRPEFGPDDLGSGWKGGFHCPC
HGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIG
>GP|14165194|gb|AAK55421.1/8-193
QGRRTWIAIT.CGAGAVGGAAVAVPFVSTFAPSERARAAGAPVEVDISKLAPGDRMTVEWRGKPVWILRRTPDQIDQLKS
LDGQ..LADPNSER....TAYPIPEYA..KNTGRSIKPEYLVVIGICTHLGCSPG..GVAKGSGNASVPSDWPGGFLCPC
HGSTFDLAGRVYKNKPAPDNLEVPPHMYLSDTVLLIG
>OMNI|NTL01XF00909/12-198
LKRRRFLTAVTTLVGTVGAGFLSVPFFKSLSPSAKSKFAGAPVVVDVGGLQEGQRLILEWRGQPVWVVRRSKAVLDALPG
LSGR..LKDPTSE.....VKSQQPVYVLHNPDLRSIRPEVSVLVGVCTHLGCSP...EMMAEIRPESFDSEWKGGYFCPC
HKSRFDMSGRVFRGMPAPINLLVPPHHYRDERTLVIG
>GP|14251203|gb|AAF76298.2/14-196
ITRRRFLAAATSAVGAVVAGMVAVPLVDSLEPTAAAEAASS.TTVDLTPIEPGMQVTVPWQKKPVIIINRTPEMLATLKE
TMAKGILKDPLCK......VPQQPPYC..TNMYRSRVPEWYVGIRICNHLCCIP...HYRPKKG..SVAPWWLGGFHCPC
HGSMYDLSARVIQGSPAPHNMAVPEYELSTEKMSATI