HMM Seed Alignment: TIGR01356

Download Alignment

>SP|P56952|AROA_PSES2/20-443
GEIRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGRAMQAMG-AKIR-KE-GDVWIINGVGNGCLLQPE-----
--AALDFGNAGTGARLTMGLVGTYD-----MKTSFIGDASLSKRPMGRVLNPLREMGVQVEAADGD-RMPLTLIGP--KT
ANPITYRVPMASAQVKSAVLLAG-------LNTPGVTTVIEPVMTRDHTEKMLQGFGAD---LTVETDKDGVRHIRITGQ
GKLVGQT---IDVPGDPS-STAFPLVAALLVEG--SDVTIRNVLMNPTRTG---LILTLQEMGADIEVLNARLAGGEDVA
DLRVR-----ASKLKGVVVPP-ERAPSMIDEYPVLAIAASFA------EGETVMDGLDELRVKESDRLAAVARGLEANGV
DCTEGEMSLTVRGRPDG-------KGLGG--GTVATHLDHRIAMSFLVMGLAAE-KPVTVDDSNMIATSFPEFMDMMPGL
GAK
>SP|Q46550|AROA_BACNO/16-432
GEITICGDKSMSHRALLLAALAEGQTEIRGFLACADCLATRQALRALG-VDIQ-RE-KEIVTIRGVGFLGLQPPK-----
--APLNMQNSGTSMRLLAGILAAQR-----FESVLCGDESLEKRPMQRIITPLVQMGAKIVSHSNF-TAPLHISG---RP
LTGIDYALPLPSAQLKSCLILAG-------LLADGTTRLHTCGISRDHTERMLPLFGGA---LEIKKE-----QIIVTGG
QKLHGCV---LDIVGDLS-AAAFFMVAALIAPR--AEVVIRNVGINPTRAA---IITLLQKMGGRIELHHQRFWGAEPVA
DIVVY-----HSKLRGITVAP-EWIANAIDELPIFFIAAACA------EGTTFVGNLSELRVKESDRLAAMAQNLQTLGV
ACDVGADFIHIYGRSD--------RQFLP--ARVNSFGDHRIAMSLAVAGVRAA-GELLIDDGAVAAVSMPQFRDFAAAI
GMN
>SP|Q9S400|AROA_STRPN/12-427
GIIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLG-VEIE-DK-DGVITVQGVGMAGLKAPQ-----
--NALNMGNSGTSIRLISGVLAGAD-----FEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGT--KN
LRPIHYELPIASAQVKSALMFAA-------LQAKGESVIIEKEYTRNHTEDMLQQFGGH---LSVD-----GKKITVQGP
QKLTGQK---VVVPGDIS-SAAFWLVAGLIAPN--SRLVLQNVGINETRTG---IIDVIRAMGGKLEITEI--DPVAKSA
TLIVE-----SSDLKGTEICG-ALIPRLIDELPIIALLATQA------QGVTVIKDAEELKVKETDRIQVVADALNSMGA
DITPTADGMIIKGKS----------ALHG--ARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDDLESL
IHG
>SP|O67494|AROA_AQUAE/12-431
GELRVPSDKSITHRAFILGALASGETLVRKPLISGDTLATLEILKAIR-TKVR-EG-KEEVLIEGRNY-TFLEPH-----
--DVLDAKNSGTTARIMSGVLSTQP-----FFSVLTGDESLKNRPMLRVVEPLREMGAKIDGREEGNKLPIAIRG---GN
LKGISYFNKKSSAQVKSALLLAG-------LRAEGMTEVVEPYLSRDHTERMLKLFGAEVITIPEERG----HIVKIKGG
QELQGTE---VYCPADPS-SAAYFAALATLAPE--GEIRLKEVLLNPTRDG---FYRKLIEMGGDISFENYRELSNEPMA
DLVVRP----VDNLKPVKVSP-EEVPTLIDEIPILAVLMAFA------DGVSEVKGAKELRYKESDRIKAIVTNLRKLGV
QVEEFEDGFAIHGT----------KEIKG--GVIETFKDHRIAMAFAVLGLVVE-EEVIIDHPECVTVSYPEFWEDILKV
VEF
>SP|Q9WYI0|AROA_THEMA/1-410
-MLSVPPDKSITHRALILSALAETESTLYNLLRCLDTERTHDILEKLG-TRFE--GDWEKMKVFPK---PFAEPI-----
--EPLFCGNSGTTTRLMSGVLASYE-----MFTVLYGDPSLSRRPMRRVIEPLEMMGARFMARQN-NYLPMAIKG---NH
LSGISYKTPVASAQVKSAVLLAG-------LRASGRTIVIEPAKSRDHTERMLKNLG-----VPVEVE----GTRVVLEP
ATFRGFT---MKVPGDIS-SAAFFVVLGAIHPN--ARITVTDVGLNPTRTG---LLEVMKLMGANLEWEITEEN-LEPIG
TVRVET----SPNLKGVVVPE-HLVPLMIDELPLVALLGVFA------EGETVVRNAEELRKKESDRIRVLVENFKRLGV
EIEEFKDGFKIVGK----------QSIKG--GSVDPEGDHRMAMLFSIAGLVSE-EGVDVKDHECVAVSFPNFYELLERV
VIS
>SP|P56197|AROA_HELPY/4-424
LDIN-ASDKSLSHRAVIFSLLAQKPCFVRNFLMGEDCLSSLEIAQNLG-AKVE-NTAKNSFKITPPT--TIKEPN-----
--KILNCNNSGTTMRLYSGLLSAQK-----GLFVLSGDNSLNARPMKRIIEPLKAFGAKILGREDNHFAPLVILG---SP
LKACHYESPIASAQVKSAFILSA-------LQAQGASTYKESELSRNHTEIMLKSLGAD---IHNQDG----VLKISPLE
KPLEAFD---FTIANDPS-SAFFFALACAITPK--SRLLLKNVLLNPTRIE---AFEVLKKMGASIEYAIQSKD-LEMIG
DIYVEH----AP-LKAINI-D-QNIASLIDEIPALSIAMLFA------KGKSMVKNAKDLRAKESDRIKAVVSNFKALGI
ECEEFEDGFYVEGLEDISPLKQRFSRIKP--PLIKSFNDHRIAMSFAVLTLAL---PLEIDNLECANISFPQFKHLLNQF
KKG
>SP|Q9RND7|AROA_BORBR/17-440
GEVALPGSKSISNRVLLLAALAEGSTEITGLLDSDDTRVMLAALRQLG-VSVGEVADG-RVTIEGVA----RFPTEQ---
--AELFLGNAGTAFRPLTAALALMG-----GDYRLSGVPRMHERPIGDLVDALRQFGAGIEYLGQAGYPPLRIGGG-SIR
VDGPVRVEGSVSSQFLTALLMAAPVLARRSGQDITIEVVG-ELISKPYIEITLNLMARFGVSVRR-DG---WRAFTIARD
AA-YRGPG-RMAIEGDAS-TASYFLALGAIGGG---PVRVTGVGEDSIQGDVAFAA-TLAAMGADVRYGPG---------
WIETRGV-RVAEGGR-LKAFD-ADFNLIPDAAMTAATLALYA------DGPCRLRNIGSWRVKETDRIHAMHTELEKLGA
GVQSGADWLEVAPPA--------PGGWRD--AHIGTWDDHRMAMCFSLAAFGPA--AVRILDPGCVSKTFPDYFDVYAGL
LAA
>SP|Q9Z470|AROA_CORGL/25-430
SDLAIPGSKSITNRALILAALASTPSTIIDVLRSRDTDLMTDGLRSLG-ITIT------EEAVDRYR----VEPGQL---
SAGSVECGLAGTVMRFLPPVAAFAD-----GPVHFDGDPQARVRPMTSILDALRSLGVEVDNNN----LPFTVNAGEVPE
G-GVVEIDASGSSQFVSGLLLSAP----RFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESE-----NQWVVHPG
E--ILGR--TWRIEPDLS-NATPFLAAAAVTGG---TIKINHWPIKTTQPGDAIRS-ILERMGCEVELVAQGEG-----Y
DLSVTG----PVALKGIE----IDMSDIGELTPTVAALAALA------STESRLTGIAHLRGHETDRLAALTAEINKLGG
KCTELKDGLLIEPA-----------SLHG--GVWHSYADHRMATAGAIIGLAVD--GVQVEDIKTTSKTFPGFENVWEEM
VG-
>SP|Q57925|AROA_METJA/14-425
GIVKAPPSKSYTHRAVIGASLADGVSRIINPLWGADCLSSVHGCRMLG-ANIELDKEKDEWIVKG--G-ELKTPD-----
--NIIDIGNSGTTLRILTSIASQIP----KGYAILTGDDSIRKRPMQPLLDALKQLNIEAFSSKLDGTAPIIVKSG-KIY
G-NVVKIRGDISSQFITSLMMLLP---FNKE--DTEIILTSPLKSKPYIDITLDILNKFGIKIDKTDN-----GFLVYGN
QK-YKPI--DYIVEGDYS-SASYLIAAGVLIN---SNITIENLFANSKQGDKAIIN-IVKEMGADIKVKKDK--------
-VIIEG----EYSLKGID----VDVKDIPDLVPTIAVLGCFA------EGKTEIYNGEHVRLKECDRLRACAVELKKMGA
DIEEKPDGLIIRGVK----------KLKG--AKLNTYHDHRLVMAFTIAGLKAE-GETIIEGEEAVKISFPNFVDVMKSL
GAN
>SP|Q9YEK9|AROA_AERPE/19-418
GRVEAPPSKSYTHRMLFLALLARGRSVVRRPLVSNDTLATLNAVALLG-GKPR-LG-RGVAEVEG--G--EVRGG-----
--AVVYAAGSGTTIRIAMGVAA-HS----AEATLLYGDESLNRRPVHPLSEALRSMGARVCD--TGGNPPVKVSG--PLR
R-ASVEVDAAISSQFATSLLIAGS-----RL--GEFELSAARLSSRGYVDITLESLSMFGVRVEREGY----RLFRLR--
GT-PKPV--DAAVPGDYS-SASFMLAAGAIAG----RVEVEGLRPVDPQPDRRIVE-LLRSMGARVRVEGGV--------
-VAVES----TGPLEPVD----VDLDGSPDLAPVAAVLAAYA------RGVSRLRGLERLKYKESDRLSAIAWNLARLGV
EARVRGGILEIRGGG-----------VEG--GVARSWGDHRIAMAMAVAGLGAR-RPVAVEGFSRVPDSYPGFLEDLARL
GAR
>OMNI|NTL01PA0454|CAB49378.1/1-391
GKVKAPPSKSYTHRAYFLSLLADSPSKVMNPLISEDTIASLDAISKFG-AQVN--G-NKIIPPQE------LTPG-----
---KIDARESGTTARISLAVAS-LA----RGTSVITGKGRLVERPFKPLVDALRSLKVKIS----GEKLPIAVEGGNPVG
--EYVKVDCSLSSQFGTAMLILAS-----KI--G-LTVEMLNPVSRPYIEVTLKVMESFGIEFERNGF-----KVKVHP-
G--IRGS--KFHVPGDYS-SASFFLAAGALYG----KVKVSNLVKDDPQADARIID-ILEEFGADVKVGRKY--------
-VVVER----N-EMKPIN----VDCSNFPDLFPILAVLASYA------EGKSVITG-RQLRLKESDRVKAVAVNLRKAGI
KVKELPNGLEIVGGK-----------PRG--FTVESFNDHRIVMAMAILGLGAE-GKTIIKDPHVVSKSYPSFFLDLRRV
LNE
>SP|Q9PK28|AROA_CHLMU/17-425
GEFSIPPSKSHSLRAILFASLSKGTSIINNSLSSPDTDTMLSACKKFG-ARIT-RV-GETLHIQGNP---PPYSQYSS--
--HHFHMGNSGIALRFLTALSSLSP-----SPILITGAHTLKRRPIEPLLSSLEQLGSEIRQKKS-SSIPFVIRGP--IS
S-GHVTISGQ-DSQYASALAITAA----VAPHPLSFSIEN--LKERPWFDLTLDWLHSLNISFSREQD-----SLFFPGA
QS-IKSFS--YSVPGDYS-SAAFLAALGLLSSSS-NPTVLYNLPSKDPQGDKQLFS-LLKSLGADIVIEKD---------
HIEIR-----PSSFSGGV----IDMDPFIDALPILAVLCCFA------KNPSHLYNALGARDKESNRIEAIAHELRKMGG
SVHPTQDGLYIEPS-----------RLHG--AVVHSHNDHRIAMALAVAGVHASSGQTLLCNTQCVNKSFPHFVIAAQTL
HAN
>SP|Q9RVD3|AROA_DEIRA/21-431
GELRAQPSKNYTTRYLLAAALAEGETRVVGVATSEDAEAMLRCLRDWG-AGVE-LV-GDDAVIRGFG----ARPQAG---
--VTLNPGNAGAVARFLMGVAALTSG----TTFVTDYPDSLGKRPQGDLLEALERLGAWVSSND--GRLPISVSGP--VR
G-GTVEVSAERSSQYASALMFLGP----LLPDGLELRLTG-DIKSHAPLRQTLDTLSDFGVRATASDD---LRRISIPGG
QK-YRPG--RVLVPGDYPGSAAILTAAALLPG----EVRLSNLREHDLQGEKEAVN-VLREMGADIVREGD---------
TLTVRG----GRPLHAVT----RDGDSFTDAVQALTAAAAFA------EGDTTWENVATLRLKECDRISDTRAELERLGL
RARETADSLSVTGS----------AHLAGG-ITADGHGDHRMIMLLTLLGLRAD-APLRITGAHHIRKSYPQFFAHLEAL
GAR
>SP|Q9HQC1|AROA_HALN1/21-436
GRARAPPSKSYTHRALLAAGYADGETVVRDPLVSADTRATARAVELLG-GAAA-RE-NGDWVVTG-FGSRPAIPD-----
--AVIDCANSGTTMRLVTAAAA-LA----DGTTVLTGDESLRARPHGPLLDALSGLGGTARSTRGNGQAPLVVDGP--VS
G-GSVALPGDVSSQFVTALLMAGA---VTET--GIETDLTTELKSAPYVDITLDVLDAFGVGASETAA-----GYRVRGG
QA-YAPSGAEYAVPGDFS-SASYLLAAGALAAADGAAVVVEGMHP-SAQGDAAIVD-VLERMGADIDWDTESG-------
-VITVQ----RSELSGVE----VGVADTPDLLPTIAVLGAAA------DGTTRITDAEHVRYKETDRVAAMAESLSKLGA
SVEERPDELVVRGGD---------TELSG--ASVDGRGDHRLVMALAVAGLVAD-GETTIAGSEHVDVSFPDFFEVLAGL
GAD
>OMNI|NTL02SS0280|AAK40646.1/1-399
GIIKAPQSKSLAIRLIFLSLFTR--VYLHNLVLSEDVIDAIKSVRALG-VKVK----NNSEFIPPEK---LEIKER----
---FIKLKGSATTLRMLIPILAAIG-----GEVTIDADESLRRRPLNRIVQALSNYGISFSSYS----LPLTITG---KL
SSNEIKISGDESSQYISGLIYALH-----ILNGGSIEILP-PISSKSYILLTIDLFKRFGSDVKFYGS-----KIHVNPN
NLVEFQG----EVAGDYG-LASFYALSALVSGG---GITITNLWEPKEYFGDHSIVKIFSEMGASSEYKDGR-------W
FVKAKD------KYSPIK----IDIDDAPDLAMTIAGLSAIA------EGTSEIIGIERLRIKESDRIESIRKILGLYGV
GSEVKYNSILIFGIN--------KGMLNS--PVTDCLNDHRVAMMSSALALVNG---GVITSAECVGKSNPNYWQDLLSL
NAK
>SP|Q9K9D5|ARA2_BACHD/32-443
GSITLPGSKSLTNRALIISALANSDSMLTGMLKSDDTYWCIQALKRLG-VQINVQ--GETTSIRGIGG---QWKSS----
---SLYIGAAGTLARFLLGALAISR----SGNWEIEASQSMSKRPIEPLVGVLRELGATIHYLRREGFYPLSIHGN-GLA
G-GTVRLSGQMSSQYISGLLIAAP----YADTPVTITVQG-SIVQHAYVFLTLHLMKSFGAQVEYDQQ---LQTIVVHPT
P--YTCQ--DIDLEADAS-TACYFLALAALTKG---RIRLNNLTASTTQPDLHMLT-VFEKMGCTVTRGSS---------
FIELEGV-SQLKGG--FQ----ISMNEMSDQALTLAAIAPFA------DGPITITDVEHIRYHESDRIAVICEALTRLGI
QVDEFEDGLTVYPG-------TPKPTLH----PLSTYDDHRVAMSLSLIGTKVK--GLRLNDPGCVAKTCPSYFQLLEQL
GIQ
>SP|P05466|AROA_ARATH/91-520
GLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDINYMLDALKRLG-LNVETDSENNRAVVEGCGG---IFPASIDSK
SDIELYLGNAGTAMRPLTAAVTAAG---GNASYVLDGVPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLP
G-GKVKLSGSISSQYLTALLMSAP----LALGDVEIEIVD-KLISVPYVEMTLKLMERFGVSVEHSDS---WDRFFVKGG
QK-YKSPG-NAYVEGDAS-SACYFLAGAAITGE---TVTVEGCGTTSLQGDVKFAE-VLEKMGCKVSWTEN---------
SVTVTGPPRDAFGMRHLRAID-VNMNKMPDVAMTLAVVALFA------DGPTTIRDVASWRVKETERMIAICTELRKLGA
TVEEGSDYCVITPP----------KKVKT--AEIDTYDDHRMAMAFSLAACADV--PITINDSGCTRKTFPDYFQVLERI
TKH
>SP|Q9P7R0|ARO1_SCHPO/407-843
VVVTPPGSKSISNRALVLAAMGNGTCRLTNMLHSDDTQFMMSALESLGAATFSWEDGGETLVVKGNGG---KLAVPK---
--EELYLGNAGTAARFLTGIAALVSSKDGAK-VVLTGNHRMKVRPIGPLVDALRANGCEINYLEKQGSLPLDLSSKNGLK
G-GIIELAATVSSQYVSSILMCAP----YASQPVTLKLVGGKPISQLYIDMTIAMMASFGVNVTKSTT--EENTYNIPCG
-K-YQNPP-HYEIESDAS-SATYPLAIAAITGT---KCTVPNIGSASLQGDARFACDVLRPMGCTVEQTAT---------
STTVQGP---PKGT--LKPLESIDMETMTDAFLTASVVAAVACNVSEGDPVTRITGIANQRVKECNRIAAMVHELAKFGV
RTGELEDGIYIFGKN--------YKELKKPEEGIYTYDDHRIAMSFSVLSLICPS-RTLIIDKACVEKTWPYWWDVLHQS
FGV