HMM Seed Alignment: TIGR01282
Download Alignment>SP|P25313|NIFD_AZOBR/14-482
LVDKVLEAYPEKSRRRRAKHLNVL...E.AEAKD.....CGVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMIHISHG
PVGCGYYSWSGRRNYYVGDTG.VDKLGTMHFTSDFQEKDIVFGGDKKLHKVIEEINELFPLVNGISIQSECPIGLNGDDI
EGVSKAKSEELG.KPVVPVRCEGFRGVSQSLGHHIANDVIRDWILPKKTE.PKEG...FVSTPYDVTIIGDYNIGGDAWA
SRILLEEIGLRVIAQWSGDGTLAELENQPKAKVNLIHSYRSMNYIARHMEEKFGIPWMEYNFFGPSQIAESLRKIAALFD
D.TIKENAEKVIAKYQPMVDAVVGDAALRAHGTKGRVPLKPLGPRHRPIVDAYHDLGMEIVGTGYEFAHNDDYQR.....
...................................TQ............HYVKEGTLIYDDVTAFELEKFVELMRPDLVA
SGIKEKYVFQKMGLPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWGIMKAPF
>SP|P19066|NIFD_RHISN/15-491
LITQVLSQYPHKAAKRRQKHLSVASDREAVGEEGETLSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHG
PVGCGQYSWSQRRNYYVGTTG.VDTFVTMQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGITIQSECPIGLIGDDI
EAVSRKKAAEHE.TTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKADGKTDVE...FETGPYDVNVIGDYNIGGDAWA
SRILLEEIGLRVVGNWSGDATLAEVERAPRAKLNLIHCYRSMNYICRHMEERYAIPWMEYNFFGPSQIEASLRKIARHFG
P.TIEERAERVIAKYRPLVDAVIDKYWPRLQGKR..VMLYVGGLRPRHVITAYEDLGMQIVGTGYEFAHNDDYQR.....
...................................TG............HYVKTGTLIYDDATSYELDTFIERIRPDLVG
SGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWDLYDAPW
>GP|46173|emb|CAA25523.1/19-488
LIEEVLKVYPEKTAKRRAKHLNVH...Q.AGKSD.....CGVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMVHISHG
PVGCGQYSWGSRRNYYVGTTG.IDSFVTLQFTSDFQEKDIVFGGDKKLDKILDEIQELFPLNNGITIQSECPVGLIGDDI
EAVSRAKSKEYGGKTIVPVRCEGFRGVSQSLGHHIANDAVRDWIFGHIEAEGKPK...FEPTPYDVAIIGDYNIGGDAWS
SRILLEEMGLRVIAQWSGDGSLAELEATPKAKLNILHCYRSMNYISRHMEEKFGIPWCEYNFFGPSKIADSLRRIAGYFD
D.KIKEGAERVIEKYQPLVDAVIAKYRPRLEGKT..VMLYVGGLRPRHVIGAYEDLGMDVIGTGYEFGHNDDYQR.....
...................................TAQ...........HYVKDSTLIYDDVNGYEFERFVERLQPDLVG
SGIKEKYVFQKMSVPFRQMHSWDYSGPYHGYDGFAIFARDMDMAVNSPIWKRTKAPW
>SP|P77874|NIFD_HERSE/15-482
LINEVLKAYPDKTAKRRAKHLTTQ...E.EGKSD.....CNVKSNIKSIPGVMTIPPCAYAGSKGVVWGPIKDMIHISHG
PVGCGQYSWGSRRNYYIGKTG.IDSFVTMQFTSDFQEKDIVFGGDKKLEKIVDEIQELFPLNKGISVQSECPIGLIGDDI
EAVSKKKSKQYEGHTIVPVRCEGFRGVSQSLGHHVANDAIKEWVLDKMDPD.KNQ...FVATPYDVAIIGDYNIGGDAWS
SRILLEEIGLRVIAQWSGDGTLAEMENTPKAKLNVLHCYRSMNYISRHMEEKFGIPWVEYNFFGPSQIEASLRQIASHFD
D.KIKEGAERVIAKYKALTDAVIAKYRPRLEGKT..VMLFVGGLRPRHVIDAYGDLGMKVVGTGYEFGHNDDYQR.....
...................................TT............HYVEDGTLIYDDVTSYEFEKFVEKIEPDLVG
SGIKEKYVFQKMGVPFRQMHSWDYSGPYHGYDRFAIFARDMDMAINSPVWGMAKAPW
>SP|Q00239|NIFD_PLEBO/22-492
LIKDVLEAYPEKGRKKREKHLNVY..QE..GKPD.....CGVKSNIKSLPGSMTTRGCAYAGSKGVVWGPIKDMIHISHG
PVGCGYYSWSGRRNYYIGTTG.IDTFGTMQFTSDFQERDIVFGGDKKLAKLITELEELFPLNRGISIQSECPIGLIGDDI
EAVAKKSAKEIN.KAVVPVRCEGFRGVSQSLGHHIANDAVRDWIFPRTDKAKKDGTIDVDPTQYDVAIIGDYNIGGDAWS
SRILLEEIGLRVVAQWSGDGTINELINTPTVKLNLVHCYRSMNYISRHMEETYGIPWLEYNFFGPTQIAKSLREIAAKFD
E.TIQAKAEEVIAKYQAQTDEVIAKFLPRLQGKT..VALMVGGLRPRHVVPAFYDLGMRLIGTGYEFGHNDDYKR.....
...................................TT............HYIEDGTLIYDDVSAFEFEEFIKEMKPDLVA
SGIKEKYVFQKMALPFRQMHSWDYSGPYHGYDGFAIFARDMDMALNSPTWSLIGAPW
>SP|O07642|NIFD_CYAA5/10-478
LIADVLSTYPEKAAKKRAKHLGVY..EE..GEAD.....CGVKSNKQSLPGVMTARGCAYAGSKGVVWGPIKDMVHISHG
PVGCGYYSWSGRRNYYIGTTG.VDSFGTMQFTSDFQERDIVFGGDKKLAKIIDEIEELFPLNGGVSVQSECPVGLIGDDI
ESVARTKSKETG.KSVVPVRCEGFRGVSQSLGHHIANDMIRDWVFPTADKENAEKGF..EGTPYDVAIIGDYNIGGDAWS
SRILLEEIGLRVVAQWSGDGTLTEMKATPNVKLNLIHCYRSMNYISRHMEEKYGIPWLEYNFFGPSKIAASLREIASRFD
E.KIQAKAEEVIEKYRKQSEEIIAKYRPRLEGKT..VMMMVGGLRPRHVVPAFKDLGMEIIGTGYEFAHGDDYKR.....
...................................TT............GYVEDATLIYDDVTGYEFEEFVKELKPDLVA
AGIKEKYVFQKMALPFRQMHSWDYSGPYHGYDGFAIFARDMDLALNSPTWGLIGTPW
>SP|Q55029|NIFD_SYNP8/10-474
LIQDVLDTYPEKLAKKRSKHLNVY..EE..GKDD.....CGVKSNIKSAPGVMTARGCAYAGSKGVVWGPIKDMIHISHG
PVGCGYYSWSGRRNYYIGTTG.VDTFGTMNFTSDFQEKDIVFGGDKKLLKITEEIEELFPLHNGISIQSECPVGLIGDDI
EGVAKKAQKITG.KPVFPFRCEGFRGVSQSLGHHIANDAVRDWVFSRDDAQEIET......TPYDVAIIGDYNIGGDAWS
SRILLEEMGLRVVAQWSGDGTINEMMQTPKVKLNLIHCYRSMNYISRHMEEKYGIPWFEYNFFGPTKIAESLRAIAALFD
D.TIKENAEKVIAKYEQQTAEVLAKYRPRLENKT..VMMMVGGLRPRHVVPAFTDLGMKMIGTGYEFAHGDDYKR.....
...................................TT............EYVDDATLIYDDVTAYEFEKFVQELKPDLVA
SGVKEKYVFQKMGLPFRQMHSWDYSGPYHGYDGFAIFARDMDLALNNPTWGLIKSPW
>GP|1294824|gb|AAC64643.1/16-486
LIKEVLQAYPEKSRKKREKHLNVH..EE..GKSD.....CGVKSNIKSVPGVMTARGCAYAGSKGVVWGPIKDMVHISHG
PVGCGYWSWSGRRNYYVGKTG.VDSFGTMHFTSDFQERDIVFGGDKKLAKIIQEIEELFPLNRGISVQSECPIGLIGDDI
EAVAKKAAKEIN.KPVVPVRCEGFRGVSQSLGHHIANDAIRDHMFPRFDKAKKENTLTIEPGPYDVALIGDYNIGGDAWA
SRMLLEEMGLRVVAQWSGDGTVNELVNGLAAKLVLIHCYRSMNYICRALEEAYGMPWMEFNFFGPTKIAASLREIAAKFD
S.KIQENAEKVIAKYTPIMNAVVEKYRPRLEGNT..VMLYVGGLRPRHVVPAFEDLGIKVIGTGYEFAHNDDYKR.....
...................................TT............HYIDNATIIYDDVTAYEFEEFVKAKKPSLVA
SGIKEKYVFQKMGLPFRQMHSWDYSGPYHGYDGFAVFARDMDIALNSPTWGLIDAPW
>GP|3372146|gb|AAD03797.1/12-481
LIQEVLDAYPAKAAKRRKKHLNVI..EE..KGAD.....CGVKSNVKSVPGVMTTRGCAFAGAKGVVWGPVKDMVHISHG
PVGCGYYSWAGRRNYYNGVTG.VDTFGTMQFTSDFQERDIVFGGDKKLAKIMNEIEELFPLNAGITIESECPVGLIGDDI
EAVAKKASKELN.KPVVPVRCEGFRGVSQSLGHHIANDTVRDWVYEPSAKVTNEEIG.FEKTPYDVSLIADYNIGGDGWS
SRLLLDEIGLRVVSQATGDGTYNEVFMAPRVNLNLIHCYRSMNYICRYMEEEYGIPWVEFNFFGPSQIAKSLRKIASFFD
D.KIKENTEKVIARYQEQADAVIAKYRPRLEGKK..VMMMVGGLRPRHIIPAFDDLGMEVIGTGYEFGHGDDYKR.....
...................................TA............DYAQEGTLIYDDVSGYEFEEFAKKLKPDLIA
SGIKEKYVFQKMGMPFRQMHSWDYSGPYHGYDGFAIFARDMDLALNSPTWNLIKAPW
>GP|13096249|pdb|1G20|A/12-479
LIQEVLEVYPEKARKDRNKHLAVN..DPAVTQSK.....KCIISNKKSQPGLMTIRGCAYAGSKGVVWGPIKDMIHISHG
PVGCGQYSRAGRRNYYIGTTG.VNAFVTMNFTSDFQEKDIVFGGDKKLAKLIDEVETLFPLNKGISVQSECPIGLIGDDI
ESVSKVKGAELS.KTIVPVRCEGFRGVSQSLGHHIANDAVRDWVLGKRDE..DTT...FASTPYDVAIIGDYNIGGDAWS
SRILLEEMGLRCVAQWSGDGSISEIELTPKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYNFFGPTKTIESLRAIAAKFD
E.SIQKKCEEVIAKYKPEWEAVVAKYRPRLEGKR..VMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDR.....
...................................TM............KEMGDSTLLYDDVTGYEFEEFVKRIKPDLIG
SGIKEKFIFQKMGIPFREMHSWDYSGPYHGFDGFAIFARDMDMTLNNPCWKKLQAPW
>OMNI|NT01MC3307/25-491
LIEEVLEVYPEESKKDRLKHLTVN..DPSITQSK.....KCITSNRKSLPGVMTIRGCAYAGSKGVVWGPIKDMIHISHG
PVGCGQYSRAGRRNYYVGYTG.VNAFGTMNFTSDFQERDVVFGGDKKLEKIVHECEALFPLMKGMSVQSECPIGLIGDDI
EAVARKTSAAIN.KPVIPVRCEGFRGVSQSLGHHIANDAIRDWVLENRK...DKM...RETGPYDVAVIGDYNIGGDAWA
SRILLEEMGLNVVAQWSGDGTLAEMENTPAVKLNLIHCYRSMNYISRHMEAKYGIPWMEYNFFGPTKIAESLRKIAEQFD
D.KIKEGAEKVIAKYTPIMEGIIGKYRPRLEGKK..VMLYVGGLRPRHVIGAYEDLGMEVVGTGYEFGHNDDYDR.....
...................................TI............KEMGDSTLIYDDVTGYEFEKFVEKVQPDLVG
SGIKEKYIFQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDMTINNPCWDSFKAPW
>SP|P00466|NIFD_KLEPN/13-479
LIQEVLEVFPETARKERRKHMMVS..DPKMKSVG.....KCIISNRKSQPGVMTVRGCAYAGSKGVVFGPIKDMAHISHG
PAGCGQYSRAERRNYYTGVSG.VDSFGTLNFTSDFQERDIVFGGDKKLSKLIEEMELLFPLTKGITIQSECPVGLIGDDI
SAVANASSKALD.KPVIPVRCEGFRGVSQSLGHHIANDVVRDWILNNRE...GQP...FETTPYDVAIIGDYNIGGDAWA
SRILLEEMGLRVVAQWSGDGTLVEMENTPFVKLNLVHCYRSMNYIARHMEEKHQIPWMEYNFFGPTKIAESLRKIADQFD
D.TIRANAEAVIARYEGQMAAIIAKYRPRLEGRK..VLLYMGGLRPRHVIGAYEDLGMEIIAAGYEFAHNDDYDR.....
...................................TL............PDLKEGTLLFDDASSYELEAFVKALKPDLIG
SGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMTLNNPAWNELTAPW
>GP|1256031|gb|AAA96263.1/15-479
MIAEVLSQYPKKAAKFRAKHLKAN...DPEGSKE.....CEVKSNIKSRPGVMTIRGCAYAGSKGVVWGPVKDMVTISHG
PVGCGQYSWATRRNYAHGHLG.VDNFTAMQITTDFQEKDIVFGGDPKLEQVCDEIVELFPLAKGISVQSECPIGLIGDDI
EAVAKKSSKKLD.IPVIPVRCEGFRGVSQSLGHHIANDAVRDHVLGTGG....DS...FEQTDYDVALIGDYNIGGDAWA
SRRILEEMGLRVIAQWSGDGTINEMASTHLSKLNLIHCYRSMNYICTTMEERFGTPWTEFNFFGPTKIISSMRKIAEFFD
D.EIKAKTEAAIARYQVRFDEITKAFRPRLEGKR..VMLAVGGLRPRHTIGAYEDLGMEVVGTGYEFAHKDDYTR.....
...................................TY............SMLKEGTVLYDDPTAFELEEFAKFLKPDLMG
AGVKEKYVFHKMGIPFRQMHSWDYSGPYHGVDGFAVFARDMDIAINSPAWDLLEAPW
>GP|580995|emb|CAA68349.1/5-519
LKDEILEKYIPKTKKTRSGHIVIK...TEETPNP.....E.IVANTRTVPGIITARGCAYAGCKGVVMGPIKDMVHITHG
PIGCSFYTWGGRRFKSKPENGTGLNFNEYVFSTDMQESDIVFGGVNKLKDAIHEAYEMFHP.AAIGVYATCPVGLIGDDI
LAVAATASKEIG.IPVHAFSCEGYKGVSQSAGHHIANNTVMTDIIGKGN....KE....QK.KYSINVLGEYNIGGDAWE
MDRVLEKIGYHVNATLTGDATYEKVQNADKADLNLVQCHRSINYIAEMMETKYGIPWIKCNFIGVDGIVETLRDMAKCFD
DPELTKRTEEVIAEEIAAIQDDLDYFKEKLQGKT..ACLYVGGSRSHTYMNMLKSFGVDSLVAGFEFAHRDDYEGREVIP
TIKIDADSKNIPEITVTPDEQKYRVVIPEDKVEELKKAGVPLSSYGGMMKEMHDGTILIDDMNHHDMEVVLEKLKPDMFF
AGIKEKFVIQKGGVLSKQLHSYDYNGPYAGFRGVVNFGHELVNGIYTPAWKMITPPW
>OMNI|CT1536/13-528
IKEELINKYPAKVAKKRSKSIVVN...DPE.IVP.....E.VQANVRTVPGIITQRGCAYAGCKGVVLGPTRDIVNIVHG
PIGCSFYAWLTRRNQTRPETPEHENYITYCFSTDMQEEHVVFGGEKKLKVAIQEAYDLFHP.KAIAIFSTCPVGLIGDDV
HAVAREMKEKLGDCNVFGFSCEGYRGVSQSAGHHIANNGVFKHMVGNNN....EV....KPGKFKLNLLGEYNIGGDAFE
IERLLEKCGITLVASFSGNSTVGAIENAHTADLNVIMCHRSINYMGDMMETKYGIPWMKVNFVGAESTAKSLRKIAEYFG
DEELKAKVEEVIAEEVPAVKAIIDEIRPRTEGKT..AMLFVGGSRAHHYQDLFSELGMTTIAAGYEFAHRDDYEGREVLP
KIKIDADSKNIEELKVTADPELYNPRKSKAELEELKAKGLEINGYEGMMKQMMKKTLVVDDISHYESEKLIEMYKPDIFC
AGIKEKYVVQKMGVPLKQLHSYDYGGPYTGFKGAVNFYKDIDRMVNNPVWKMIKAPW
>SP|P55170|NIFD_METBA/15-526
LVDDMLKVLPEKAARNRRKHIVVR...NCS.TEQ.....H.IEADDKVIPGILTNRGCAFAGTKGVVFGPIKDMVHLVHG
PIGCAFYTWGTRRNFAKAEEG.GDNFMNYCVCTDMKETDIVFGGEKKLKKAIDEVVKIFHP.EAITICATCPVGLIGDDI
ESVAREAEKEHG.IKVIPARCEGYRGVSQSAGHHIASNALMEHLIGTEE....IK....SPTPFDINVFGEYNIGGDLWE
VKPIFEKIGYRIVSSLTGDGSFHRISQAHQAKLSILVCHRSINYTNRMMEEKYGVPWLKVNYIGTKGTEKLLRKMAEFFD
DPELTRKTEEVIAEEKAKYAEDIEKYRKKLKGKT..AFIYAGGSRSHHYINLFEELGMKVIAAGYQFAHRDDYEGRQIIP
QIKEKALGSILEDVHYERDEN.VKPTVSPERIEELKTK.IGLMDYKGLFPDAEDGTIVIDDLNHHETEVLVKTLKPDIFC
SGIKDKYWAQKPWSPSRQIHSYDYSGRYTGFSGVLNFARDIDMALHSPTWKFIRPPW