HMM Seed Alignment: TIGR01226
Download Alignment>SP|P53443|PAL2_ORYSA/23-700
DPLNWGKATEEMTGSQVDEVKRIGAEYR.QPLVKIEGASLRIAQVAAVAAAGEAR...VELDESAR..ERVKASSDWVMN
SMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTG..........TDG.HVLPAEATRAAMLVRINTLLQ
GYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAWALPPDG.....SKVNAAEGLKIAGIQ
GGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPE.YTDHLTHKLKHHPGQIEAAAIMKH
ILEGSSYMKHAKKLGELDPLM.KPKQDRYALRTSPQWLGPQIEVIRAATKSIEREIN..SVNDNPLIDVSRGKALHGGNF
QGTPIGLSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV
QSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVAR
FCEKD..LLKEIDREGVFAYGDDPCSHNYPLMKKLRNVLVERALANAGRVQRRHLGVRQGR.AVRGGLRATLPGAIDGRA
AVENG.TAAIPSRITECRSYPLYRFVREELGTKYLTGEKTR...........SPGEELNKVLVAINEGKHIDPLLECLK
>SP|O23865|PAL1_DAUCA/19-698
DPLNWGMAAEALTGSHLDEVKRMVAEFR.KPMVQLGGETLTVSQVAAIAAG.SVK...VELAESAR..AGVKASSDWVME
SMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSG..........NDSSNILPHSATRAAMLVRINTLLQ
GYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTG.....ENLTAAEAFKLAGVD
GGFFELQPKEGLALVNGTAVGSGMASMVLFETNILAVLAEVMSAIFAEVMQGKPE.FTDHLTHKLKHHPGQIEAAAIMEH
ILDGSSYVKAAEKQHEMDPLQ.KPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREIN..SVNDNPLIDVSRNKAIHGGNF
QGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV
QSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTFLVGLCQAVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSR
FCELD..LLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGETEKNLSTSIFQKIAAFEDELKALLPKEVESAR
AVVESGNPAIPNRIKECRSYPLYKFIREELGTVYLTGEKVT...........SPGEEFDKVFTAMSKGEIIDPLLACLE
>SP|P14717|PAL1_ORYSA/11-691
DPLNWGAAAAEMAGSHLDEVKRMVAQFR.EPLVKIQGATLRVGQVAAVAQAKDAARVAVELDEEAR..PRVKASSEWILT
CIAHGGDIYGVTTGFGGTSHRRTKDGPALQVELLRYLNAGIFGTG..........SDG.HTLPSETVRAAMLVRINTLLQ
GYSGIRFEILEAITKLLNTGVTPCLPLRGTITASGDLVPLSYIAGLITGRPNAQAISPDG.....RKVDAAEAFKLAGIE
GGFFTLNPKEGLAIVNGTSVGSALAATVMFDANILAVLSEVLSAVFCEVMNGKPE.YTDHLTHKLKHHPGSIDAAAIMEH
ILAGSSFMSHAKKVNEMDPLL.KPKQDRYALRTSPQWLGPQIQVIRAATKSIEREVN..SVNDNPVIDVHRGKALHGGNF
QGTPIGVSMDNARLAIANIGKLMFAQFSELVNEFYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYSSELQYLANPITNHV
QSAEQHNQDVNSLGLVSARKTLEAVDILKLMTSTYIVALCQAVDLRHLEENIKSSVKNCVTQVAKKVLTMNPTGDLSSAR
FSEKN..LLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDRRAR.GLRVLQDH.QVRGGAPLCAAPGDRGRP
RRRRQRTAPVANRIVESRSFPLYRFVREELGCVFLTGEKLK...........SPGEECNKVFLGISQGKLIDPMLDCLK
>SP|P52777|PALY_PINTA/30-709
DPLNWVRAAKAMEGSHFEEVKAMVDSYFGAKEISIEGKSLTISDVAAVARRSQVK...VKLDAAAAK.SRVEESSNWVLT
QMTKGTDTYGVTTGFGATSHRRTNQGAELQKELIRFLNAGVLGKC..........PEN..VLSEDTTRAAMLVRTNTLLQ
GYSGVRWDILETVEKLLNAWLTPKLPLRGTITASGDLVPLSYIAGLLTGRPNSRVRSRDG.....IEMSGAEALKKVGLE
K.PFELQPKEGLAIVNGTSVGAALASIVCFDANVLALLSEVISAMFCEVMNGKPE.FTDPLTHKLKHHPGQMEAAAIMEY
VLDGSSYMKHAAKLHEMNPLQ.KPKQDRYGLRTSPQWLGPQVEIIRSATHMIEREIN..SVNDNPVIDVARDKALHGGNF
QGTPIGVSMDNLRLSISAIGKLMFAQFSELVNDYYNGGLPSNLSGGPNPSLDYGLKGAEIAMASYTSELLYLANPVTSHV
QSAEQHNQDVNSLGLVSARKSAEAIDILKLMLSTYLTALCQAVDLRHLEENMLATVKQIVSQVAKKTLSTGLNGELLPGR
FCEKD..LLQVVDNEHVFSYIDDPCNASYPLTQKLRNILVEHAFKNAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLAR
ESYDKGTSPLPDRIQECRSYPLYEFVRNQLGTKLLSGTRTI...........SPGEVIEVVYDAISEDKVIVPLFKCLD
>SP|P10248|PALY_RHORB/34-713
KTAGAGSLLPTTETTQLDIVERILADAGATDQIKLDGYTLTLGDVVGAARR.GRS...VKVADSPHIREKIDASVEFLRT
QLDN..SVYGVTTGFGGSADTRTEDAISLQKALLEHQLCGVLPTS...MDGFALGRGLENSLPLEVVRGAMTIRVNSLTR
GHSAVRIVVLEALTNFLNHGITPIVPLRGTISASGDLSPLSYIAASITGHPDSKVHVDG......KIMSAQEAIALKGLQ
P..VVLGPKEGLGLVNGTAVSASMATLALTDAHVLSLLAQALTALTVEAMVGHAGSFHPFLHDVTRPHPTQIEVARNIRT
LLEGSKYAVHHETEVKVKDDEGILRQDRYPLRCSPQWLGPLVSDMIHAHAVLSLEAG.QSTTDNPLIDLENKMTHHGGAF
MASSVGNTMEKTRLAVALMGKVSFTQLTEMLNAGMNRALPSCLAAE.DPSLSYHCKGLDIAAAAYTSELGHLANPVSTHV
QPAEMGNQAINSLALISARRTAEANDVLSLLLATHLYCVLQAVDLRAMEFEHTKAFEPMVTELLKQHFGALATAEVEDKV
RKSIY....KRLQQNNSYDLEQRWHDTFSVATGAVVEALAGQEVS.........LASLNAWKVACAEKAIALTRSVRDSF
WAAPSSSSPALKYLSP.RTRVLYSFVREEVGVKARRGDVY......LGKQEVTIGTNVSRIYEAIKSGCIAPVLVKMMA
>GP|4127289|emb|CAA09013.1/36-740
LSKASRTMTKTSALSQFLEAYRELEGYKNGRAIKVDGQTLSIAAVAAAARY.NAA...VELDESPLVKERVRKSQLAIAN
KVSTGASVYGLSTGFGGSADTRTDKPMLLGFALLQHQHVGILPTSTEPLDVLPLQDANNTSMPEAWIRGAILIRMNSLIR
GHSGIRWELIEKMRELLAANVIPVVPLRGSISSSGDLSPLSYIAGTIIGNPSIKVYHGPSKSGIRQIGSSKDVLALHNIE
P..FPLESKEPLGILNGTAFSASVAALALNEAIHLVLLAQVCTAMGTEALIGTRASHAPFIHATARPHPGQVECAENIWN
LLDGSKLAQLEEHEVRLEDDKYTLRQDRYPLRTSPQFLGPQIEDIISAFQTVTQECNYLPATDNPLIDGETGESHHGGNF
QAMAVTNAMEKTRLALHHVGKLLFSQSTELVNPAMNRGLPPSVAAT.DPSLNYHAKGLDIATAAYVAEA....TPGPTHI
QSAEMHNQAVNSLALISARATITSLEVLTSLIASYLYILCQALDLRALQREFLPGLDIIIREELRSSFGSFLSSEQMEKL
QQNLTSAFEDHLDKTTTMDNTDRMTTMAATSSSVLLQFFTDSGASVPPSSCD.LLSSVSSFQSSVATRSSVLMDDLRKEY
IFGDRGPTPASQYIG..KTRPVYQFIRTTIGVRKHGSENYNKFYNGLGVEDVTIGQNISRIYESIRDGKMQSIIVSLFD