HMM Seed Alignment: TIGR01171

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>SP|P56030|RL2_HELPY/3-275
IKTYKPYT.PSRRFMSVLDSKDITAK...............SSVKGLLTKLKATAGRN.NNGRITSRHKERGAKKLYRII
DFKR.NKYNIEGKVAAIEYDPYRNARIALVVYPDGDKRYILQPSGLKVGDSVIAA........EGGLDIKVGFAMKLKNI
PIGTVVHNIEMHPGAGGQLARSAGMSAQIMGREN..KYTIIRMPSSEMRYILSECMASVGVVGNEDFINVSIGKAGRNRH
RGIRPQTRGSAMNPVDHPHGGG.EGKTGTS.GHPVSPWGTPAKGYKTRKKKA.SD..............KLIISRKKH
>OMNI|NT01CJ1767/3-275
IKTYKPYT.PSRRYITGLSSEDITAK...............PSVRSLLVKLPAHAGRN.SYGRITSRHKEAGAKKLYRII
DFKR.RKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKRYILQPRGLSVGDIVAAA........ESGLDIKPGNAMKLKNI
PVGTIVHNVELKPGKGGQMIRSAGAYAQLMGKEE..KYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRH
RGIRPQTRGSAMNPVDHPHGGG.EGKKNSG.RHPVTPWGKPTKGAKTRRKKA.SD..............KLIISRRKG
>SP|P94270|RL2_BORBU/3-277
IKTYKPKT.SSLRYKTTLSFDDLSKG............N..DPLKSLTKGKKFKSGRD.SSGRISIRRRGGGHKRKYRLI
DFNRRDKFSIPARVASIEYDPNRSANIALLVYKDGEKRYIISPKGIKVGDVLESG.........PNAPIKIGNALPLENI
PIGRTVHNIELNVGKGGQLIRSAGGYAMILASDG..NYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRW
LGRRPKVRGVAMNPVDHPHGGG.EGKTSGG.RHPVSPWGQPTKGYKTRKKKRYSD..............KFIIKRRNK
>SP|O83222|RL2_TREPA/3-273
LKMYRPMT.AGLRGRVDLCRAELT.A............R..TPEKSLTRGKPAKAGRG.AGGRISVRHRGGGHKRRYRDI
DFKR.DLHDIPGTVKTIEYDPNRSVNIALVFYANGQKRYILAPKGLKVGQQVVSG.........EKVPLEPANALPLGVI
PVGFTVHNVELTIGKGGQIARSAGTRAVIAAKDG..GYVMLRLPSGEARLVHRRCYATIGELGNEDHMNTALGKAGRARW
RGVRPTVRGMAMNPVDHPLGGG.EGRGKG..RNPVTPWGQPCRGYKTRKKRRVSD..............RFIVSKRK.
>SP|P02387|RL2_ECOLI/2-272
VVKCKPTS.PGRRHVVKVVNPELHKG...............KPFAPLLEKNSKSGGRN.NNGRITTRHIGGGHKQAYRIV
DFKR.NKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSG.........VDAAIKPGNTLPMRNI
PVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDG..AYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW
RGVRPTVRGTAMNPVDHPHGGG.EGRN.FG.KHPVTPWGVQTKGKKTRSNKR.TD..............KFIVRRRSK
>GP|9106119|gb|AAF83965.1/3-275
LIKFKPTS.PGRRSAARVVTPNIHKG...............SPHAALLEPQSKTGGRN.HHGRITVRHIGGGCKQRYRVI
DFKR.DKEAIPARVERIEYDPNRTAHIALLCYVDGERCYIIAPKGLKEGDKIISG.........PNVPIKLGNSLPLRNI
PVGTTVHAVELKPSKGAQMARSAGSSVQLVAREG..VYATLRLRSGEMRRVLAECRATIGEVGNEEHNLRKLGKAGAKRW
LGVRPTVRGAAMNPVDHPHGGG.EAKSGQGNPHPVTPWGVPTKGYKTRKNKR.TQ..............QFIIRGRRG
>OMNI|NMB0145/3-274
IVKMKPTS.AGRRGMVRVVTEGLYKG...............APYAPLLEKKNSTAGRN.NNGHITTRHKGGGHKHHYRVV
DFKR.NKDGIPAKVERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSG.........AEAAIKVGNTLPIRNI
PVGTTIHCIEMKPGKGAQIARSAGASAVLLAKEG..AYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRW
RGIRPTVRGVVMNPVDHPHGGG.EGRTGEA.REPVSPWGTPAKGYRTRNNKR.TD..............NMIVRRRYS
>SP|Q9ZCQ8|RL2_RICPR/3-273
LKNFNPIT.PSLRELVQVDKTNLWKG...............RPLKTLTKGMSKTGGRN.QQGRITSWHRGGGHKKLYRVI
DFKR.KKIDISAIVERIEYDPNRTAFIALIKYDDGEYSYILAPQKLSIGDRVISS.........QAADIKIGNCLPLKSI
PIGTTLHNVEMKIGKGGQIARSAGTSVELVGKDS..GYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRW
LGWRPHVRGVAMNPVDHPHGGG.EGKTSGG.RHPVTPWGFSTKGKKTRKNKR.TS..............KFIVKKRK.
>SP|Q9Z7R0|RL2_CHLPN/2-284
FKKFKPVT.PGTRQLVLPAFDELTTRGELRG...TKSKRSLRPNKKLSFFKKSSGGRD.NLGHISCRHRGGGAKQLYRVV
DFKR.NKDGITAKVVTVEYDPNRSAYIALLSYEDGEKRYILAPKGIQRGDVVVSG.........EGSPFKPGCCMTLKSI
PLGLSVHNIEMRPSSGGKLVRSAGLAAQVIAKSP..GYVTLKMPSGEFRMLNEGCRATIGEVSNADHNLRVDGKAGRRRW
MGVRPTVRGTAMNPVDHPHGGG.EGRH.NG.YIPRTPWGKVTKGLKTRDKNK.SN..............KWIVKDRRK
>SP|P38510|RL2_THEMA/3-275
LKRFKPVT.PGRRFMVISDFSDITK...............TEPEKSLLAPLKKTGGRN.HHGRVTVRHRGGGHKRRYRII
DFKRYDKAGIPAKVLAIEYDPNRSARIALLLYADGEKRYILAPKGVNVGDTLMSG.........PDAEIRPGNALPLEKI
PVGTLVHNVEFTPGKGGQIARAAGTYCQIMAKEG..NYALLRMPSGELRKVHIKCYATVGVVGNEDHKNEVHGKAGRVRW
LGRRPHVRGVAMNPVDHPHGGG.EGRG.KGH.HPTSPWGLPTKGYKTRRGKRPSD..............KFIVRRRNE
>SP|O66434|RL2_AQUAE/3-301
VRKLKPVT.NGTRHAVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWHRAKGRSRQRGNITARHRGGGHKKLYRII
DFKR.DKSLVPAKVVSIEYDPFRSARICLLHYADGEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYI
PEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRVGLAEHELVKLGKAGRARW
LGWRPHTRGTAMNPVDHPHGGG.EGRT.RGK.HPESPWGWKTKGYKTRRGKKYSD..............QFIVTRRDG
>OMNI|DR0314/3-275
VKKYRPYT.PSRRQMTTADFSGLTK...............KRPEKALTEALPKTGGRN.NRGRITSRFIGGGHKRLYRII
DFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEKRYILAPEGLTVGATVNAG.........PEAEPKLGNALPLRFV
PVGAVVHALELVPGKGAQLARSAGTSVQVQGKES..DYVIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSRW
LGRKPHQRGSAMNPVDHPHGGG.EGRTGAGR.VPVTPWGKPTKGLKTRRKRKTSD..............RFIVTRRK.
>SP|P95052|RL2_MYCTU/3-274
IRKYKPTT.PGRRGASVSDFAEITR...............STPEKSLVRPLHGRGGRN.AHGRITTRHKGGGHKRAYRMI
DFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESG.........ANADIKPGNNLPLRNI
PAGTLIHAVELRPGGGAKLARSAGSSIQLLGKEA..SYASLRMPSGEIRRVDVRCRATVGEVGNAEQANINWGKAGRMRW
KGKRPSVRGVVMNPVDHPHGGG.EGKTSGGR.HPVSPWGKPEG..RTRNANKSSN..............KFIVRRRRT
>SP|P42919|RL2_BACSU/2-275
IKKYKPSS.NGRRGMTTSDFAEITT...............DKPEKSLLAPLHKKGGRN.NQGKLTVRHQGGGHKRQYRVI
DFKR.DKDGIPGRVATVEYDPNRSANIALINYADGEKRYILAPKGIQVGTEIMSG.........PEADIKVGNALPLINI
PVGTVVHNIELKPGKGGQLVRSAGTSAQVLGKEG..KYVLVRLNSGEVRMILSACRASIGQVGNEQHELINIGKAGRSRW
KGIRPTVRGSVMNPNDHPHGGG.EGRAPIGRKSPMSPWGKPTLEFKTRKQKNKSD..............KFIVRRRKN
>SP|P73317|RL2_SYNY3/3-276
IRNYRPMT.PGTRQASVSDFTEITK...............SKPEKSLTTNRHDQKGRN.NRGVITSRHRGGGHKKLYRII
DFKR.NKQNIPARVAAIEYDPNRNARIALLFYTDGEKRYILAPAGLQVGMTVIAG.........EEAPFEIGNTLPLSRI
PLGSEIHNVELVAGRGGQMVRSAGAFAQVVAKEG..DYVTIKLPSKEVRMVRKECVATLGRVSNAEFRNLKLGKAGRKRH
LGRRPHVRGSVMNPCDHPHGGG.EGRAPIGRSGPVSPWGKPALGAKTRNKKKRSS..............ALIVRRRTK
>SP|P51311|RK2_PORPU/3-291
IRLYRAYT.PGTRNRTVSTFSEITT...............DKPEKSLINKHHFCKGRN.NRGVITCRHKGGGHKQRYRLI
DFKR.NRHNIIAKVASIEYDPNRNARIALLHYLDGEKRYILHPRSLSVGAIVVSG.........PMAPIEVGNALPLSTI
PLGTAVHNIELRPYCGGQIVRSAGTYAQIVAKEG..NFVTVKLPSSEVRMIRKECYATIGQVGNIDASNITLGKAGRSRW
LGKRPTVRGVVMNPVDHPHGGGGEGKSPIGRSRPVTPWGKPALGVKTRNPNKYSNPYVLLVVNKVYLTYNLILKYNVE
>SP|P06378|RK2_MARPO/3-276
IRLYRAYT.PGTRNRSVPKFDEIVK...............CQPQKKLTYNKHIKKGRN.NRGIITSQHRGGGHKRLYRKI
DFQR.NKKYITGKIKTIEYDPNRNTYICLINYEDGEKRYILYPRGIKLDDTIISS.........EEAPILIGNTLPLTNM
PLGTAIHNIEITPGKGGQLVRAAGTVAKIIAKEG..QLVTLRLPSGEIRLISQKCLATIGQIGNVDVNNLRIGKAGSKRW
LGKRPKVRGVVMNPIDHPHGGG.EGRAPIGRKKPLTPWGHPALGKRSRKNNKYSD..............TLILRRRKN
>SP|P47400|RL2_MYCGE/3-282
IKKIISRSNSGIHNATVIDFKKLLTN..............SKPEKSLLVTLKKHAGRN.NQGKITVRHHGGRHKRKYRLI
DFKRYHYDNLKATVKSIEYDPNRSCFISLLHYQNGVKTYIISPDGIKVGDQVYSS........DHAIDIKLGYCMPLAFI
PEGTQVHNIELNPKGGGKIARSAGSYARILGQDETGKYIILQLISGETRKFLKECRATVGVVSNLDHNLVVIGKAGRSRH
KGIRPTVRGSAMNPNDHPHGGG.EGRSPVGRDAPRTPWGKRHMGVKTRNMKKHST..............NLIIRNRKG