HMM Seed Alignment: TIGR01141
Download Alignment>SP|O67857|HIS8_AQUAE/3-346
PQRIKELEAYKT------------EVTPASVRLSSNE---FPYDFPEEIKQRALEELKKV--PLNKYPDPEAKELKAVLA
DFFG-------------VKEENLVLG-NGSDELIYYLSIAIGELY-IPVYIPVPTFPMYEISAKVLGRPLVKVQLDEN--
FDIDLERSIEL--IEKEKPVLGYFAYPNNPTGNLFSRGKIEEIRNR----GVFCVIDEAYYHYSGE---------TFLED
ALKRE-DTVVLRTLSKIG-MASLRVGILIGKGEIVSEINKVRLPFNVTYPSQVMAKVLLTEGRE-FLMEKIQEVVKERER
MYDEMKKIEGVE-VFPS--KANFLLFRTPY-----PAHEVYQELLKRDVLVRNVSYMEGL-QKCLRVSVGKPEENNKFLE
ALEES
>SP|Q9JYH7|HIS8_NEIMB/9-357
RDDIQAMSAYQIA-----------DVPPGFAKLDSMESPVHPFAGHETLLQEWQARLAAA--PIHLYPNPSGSGLQEALR
SAFD------------IPDCADIALG-NGSDELIQFITMLTAKPG-AAMLAAEPSFVMYRHNAALYGMDYVGVPLNGD--
FTLNLPAVLEA--VRKHRPALTFIAYPNNPTGVCFTRAEIEAVIEAS---DGIVVVDEAYGAFNGD---------SFLPQ
AGRIP-NLIVLRTLSKIG-FAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALRHYG--IISANIDSLKNERER
MFAELGKICRLN-TFSS--QANFITIRVP------DADLLFDTLKQNRILVKKLHGAHPLLEHCLRITVGSPAQNDAVLN
IIRQL
>SP|P44423|HI81_HAEIN/23-366
RQNIQALTPYQS-------ARKLGGN--GTIWLNANE---YPTSPE----FQLSGK------DLNRYPEPQPQRVVQAYA
NYAG-------------VSTENVLVT-RGGDEGIELIIHTFCEPKQDAILFCPPTYGMYAVSAETAGVLSKTVPLTDD--
-FQLNLPEIK---NHLNDVKVVFVCSPNNPTGNLLKQSDILDLLQIT-AGKAIVVVDEAYIEFCPE--------ASVINL
LKNYP-HLAIIRTLSKAFALAGLRCGFVLANPELIDILSKVIAPYPIPVPSADLAEQALRPSNIATVQALTQELLSNRQW
LAKALLVLHQVEKVYES--EANYLLIKCQ------NGQAVFKALWEQGIILRDQNKTL-HLQNCIRITVGTRNECEKVVE
AIKEV
>OMNI|VC1134/6-344
RQQIQALTPYLS-------ARRIGGS--GDVWLNANE---SPFNNE----YKTDFA------RLNRYSDCQPKAMIQAYA
NYAG-------------VQPEQVLTS-RGADEGIELLIRAFCEPNQDVILFCPPTYGMYAISAETFGVERKKVPLTTD--
-WQLDLPSIE---ANLDRVKLVFVCSPNNPTGNLVKRADIIKLLEMT-QDRAIVVMDEAYIDFCPE--------ASTVDL
LAQYP-NLAILRTLSKAFALAGLRCGFTLANAELINVLLKVIAPYPVPVPVAEIAVQALSPAGLARAKYQVLDLGANRAY
LQVGLSMVPGVQ-VFEG--WGNYLLVKFP------DGDALFKAAWEHGIILRNS---P--IENCVRISVGNREECEKTVA
FIRNY
>SP|P06986|HIS8_ECOLI/11-354
RENVRNLTPYQS-------ARRLGGN--GDVWLNANE---YPTAVE----FQLTQQ------TLNRYPECQPKAVIENYA
QYAG-------------VKPEQVLVS-RGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDN--
-WQLDLQGIS---DKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVADEAYIEFCPQ--------ASLAGW
LAEYP-HLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREY
LIAALKEIPCVEQVFDS--ETNYILARFK------ASSAVFKSLWDQGIILRDQNKQPS-LSGCLRITVGTREESQRVID
ALRAE
>OMNI|NT01BA0107/10-355
RKNIKKLIPYQS-------ARRIGGEH-GNILLNANE---SPVSIF----FKLKKK------PFNRYPECQPSKLISSYA
HYVN-------------LSCNQILAT-RGADEGIELLIKAFCEPGKDAIIYCPPTYDMYRINATIAGVEIKEIPTIKNT-
-WQLDLLNIK---LNLSRVKLIYICNPNNPTGNIFFKKDLIFLLNIT-LGQALVVIDEAYIEFSPE--------ESMTNY
LKDYP-NLVVLRTLSKAFALAGIRCGFTLAKKEIIQTLSKVISPYPISIPVSDIAIRSLEKDYVQLMKNRVLDSNNNRIW
LINQLKNITCVETVFES--NANYVLVKFS------MFEKVFETLWNKGIILRNQNEKTN-LKKCIRISMGTRSESLRLIK
ELKIF
>OMNI|NT01XF2491/13-360
RQELRNFAGYSS-------ARSVALT--GDLWLNANE---SAWPNP----ADS-HA------TMRRYPEPQPPKLRQMLA
ALYG-------------CVPEQLLIG-RGSDEGIDLLVRAVCEPGCDPVLVTPPVFGMYAVSAQLQNAPVIQVPLVDDAA
GFHADVPAIITA-AQTSRAKLVFLCSPSNPVGAAIPLQQIETILQTL-AGTALVVVDEAYGEFSDV--------PSVVPL
LARYP-HLVVLRTLSKAHALAAVRIGSVIADAHLVAILRRCQAPYPLPTPCVSLAEQGLSAAALQVTAQRVAEIRAERER
LGAALACLSGVRRVYPS--QGNFLLVRFD------DAEAALQALYAAGVVVRDQRAAPQ-LHDALRLTVGTPEQNTRLLA
VLRDI
>SP|P07172|HIS8_YEAST/10-378
RPKIYNLEPYRC-------ARDDFTE---GILLDANE---NAHGPTP---VELSKT------NLHRYPDPHQLEFKTAMT
KYRNKTSSYANDPEVKPLTADNLCLG-VGSDESIDAIIRACCVPGKEKILVLPPTYSMYSVCANINDIEVVQCPLTVSDG
SFQMDTEAVLTILKNDSLIKLMFVTSPGNPTGAKIKTSLIEKVLQN--WDNGLVVVDEAYVDFCG---------GSTAPL
VTKYP-NLVTLQTLSKSFGLAGIRLGMTYATAELARILNAMKAPYNISSLASEYALKAVQDSNLKKMEATSKIINEEKMR
LLKELTALDYVDDQYVGGLDANFLLIRINGGDNVLAKKLYYQLATQSGVVVRFRGNELG-CSGCLRITVGTHEENTHLIK
YFKET
>SP|O33770|HIS8_SULSO/27-369
RNKIKSWLLNAS--------EYDFTDIKEGIRLHLNE---SPFEPPQFIIDAVKMYLS----KGNRYQHPDLLEKYRELA
AEYS------------KVEPENIYPS-VGADGSIRAIFYNLVEPG-DTILTNYPSYSMYSVYSSVRGTKVIKVNLKEDNE
WWKENTDDLL---AQAEKVELVIIDDPNNPTGSPMLNGKKELIGQLAENTKGFVVIDEAYYEFGG---------YTVSPY
IYDYP-NVLVVRTLSKAFSLASYRLGYTIANEEIVKALMKSSTPFDIPLPSLIAGITALENPS--YIKDVVNIVNRNREI
LYQGLKNLN-LK-VYKS--ITNFLLIK--------DNRNLQEMLMRHGIAIRKLY------DNFYRITIGTEDQCKMVID
KLGEE
>SP|P73807|HIS8_SYNY3/23-362
RPSVRHTPAYVPG------EQPQTN---DFIKLNTNE---NPYDPPAQVLAAVAAELP----KVRLYPDPVSTQLRQAAA
DLYG-------------VDLNQVLAG-NGSDDILNIVVRTFVDPG-ETVAFLDLTYSLYETIASVHGAKVQKIATDAN--
-----FDLTGP--VICPEAKLIFLASPNPPKGKHLNREFLWQTCAQA---EGVVVIDEAYGDFSDE---------DHWDF
LQEFD-NVIISRTLSKSYSLAGMRVGLAIAAPALIEEMDKVRDSYNLDRLAQVLGTAALRNQA--EFVPLWEKVRHTRTR
LMEQLAEL-DFQ-VCPS--DANFVFA-APR-W--MAAADLYQALKEKKILVRYFN--HPRITDYLRITVGTDGEIDQLLL
AIASL
>OMNI|NT01MC4245/45-394
RPEILAMAGYTPG------EQPKPGE--QVIKLNTNE---NPYGPPEAVKQAMHAAIHD---NLRRYPSPDGYGVREAAA
RVLG-----------HGLTPEQIILG-NGSDDLLTMLLRTFIDPG-QVVASMEPTYTLYEALVTIQGGCYRSVPWQPD--
---GGLPLEG---LVALQPKLIFVTRPNAPTGHVVPLEQVAALCQAVAQ-SAVVVLDEAYGDFAED---------HGLPL
LAAHP-NLIITRSASKSLSLAGMRIGIGFMHADVALQMHKVRDSYNVDRVAQAALLAAYENWS--DYAPLIARIKQQRQW
TTTQLRKR-GFE-VKDS--YGNFVLARVPQGG--LDGLQWLESLKKRGILIRYFGSIP-QLSEFLRITIGTEEEMALLMT
AIDEI
>SP|O06591|HI81_MYCTU/16-365
RADLRGKAPYGAP------------QLAVPVRLNTNE---NPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLA
GYLTAQTG-------IQLGVENIWAA-NGSNEILQQLLQAFGGPG-RSAIGFVPSYSMHPIISDGTHTEWIEASRAND--
--FGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPG---IAIVDEAYGEFSSQ--------PSAVSL
VEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSD--DTLSSVAALIAERER
VTTSLNDMG-FR-VIPS--DANFVLFGEFA-----DAPAAWRRYLEAGILIRDVG-----IPGYLRATTGLAEENDAFLR
ASARI
>SP|Q58365|HIS8_METJA/11-371
RDVVKKLKPYVPGKSKEEIARAYGIKPEDIIKLGSNE---NPWGPSPKIKEKILDEID----KIHQYPEPVNPILMKELS
KFLN-------------VDEENIIVGGDGADEIIDTIFRTFVDDG-DEVIIPIPTFTQYRVSATIHNAKIKYAKYDKEK-
DFKLNVESVLN--NITDKTKVIFLCTPNNPTGNIIENRDVERVINET---DALVVIDHAYIEYAKK-------EYDWTQK
APEYD-NVIVLRTFSKVFGLAGMRVGYGVANKKIIDYMMRVKPIFSLTRLSQVCAITALRDRE--FFERCVRDGIKSREM
LYNGLKKFKDIK-VYPS--EANYLLVELK--T--MKAKEFCEELLKRGVIVRDCTSFDGLGDNYVRVSIGTFEEVERFLK
ILEEI
>SP|O27624|HIS8_METTH/12-371
RNKINDIEPYVPGRSIKEIADAYGLKEDEIIKLGSNE---NPLGPSPAAVEAMERELE----SVHRYPESALTDLREAIA
DYAG-------------VGMDQVIVGGDGADEIIDVLGRTFLEPG-ESFVVPMPSYMYYEYTLQAHDARAVHARWDVN--
ENRLDLESVLD--AVDESTRLVFLCTPNNPTGGLIDKKDIRAVLEST---DTLVVVDEAYTEFAG---------VDNTDL
LPDHE-NLFILRTFSKVMGLAGMRIGYGLGDPQIIEYMHRVKPVFSLTRLSHAAALATIRDRD--YIKKSTEYSIKSREY
LYSGLKKFPELR-VFRS--YANYILIDVRGTG--RTAAELSEELLRKGIIVRDCTSFTGLDEYWIRVSVGTLEEDRRFLE
VLGEL
>SP|O28255|HI82_ARCFU/2-342
RDVVRFINPYDPG----LFPEDFPDK--EVVNLSSNE---NPYEPSEEVREAYLRAVK----YIPRYPKADYARLKKALA
EYTG-------------FEVENIAVG-CGASELISCICNVLLEEL-DRVVIPMPSYTLYSIYAMLRSASISFPVFEGYR-
------VDPDV--IAEERPKLVFLCSPNNPTGNSLSREIVQKVAESA----EYVVLDEAYVEFSDD---------SKIEM
VRDYN-NLIVLRSFSKFFGLAGMRVGYAVCSAEIAEAIEKVRLPFGISYPAVETAIAALRSLD--YYKKVRDRIVRERER
LIEKLKEIEWLE-VYPS--DANFVLVKA-------NKEGVVEKLAEKGFIVRDASVM-GLEGLYIRITVGKREDNDRLIE
ALREI
>OMNI|NT01HS0776/32-392
LRDLSDHVEYRAGRGIEEVARELGRDPSEFVKLSSNE---NPHGPSPKATIAIREAAT----GVHRYPKAVHADLTGALA
DRWD-------------VGDDQVWVA-NGGDGALDYLARATLDPG-DSVLVPSPGFTYYGMSARFHHGNVAEYDVAEGA-
DGFEMTADAVV--DAYDGERVVYLTTPHNPTGARFTLDEIVAVADRTDE-DTLVLVDEAYGEFTETPSAVTLFDGQPAGG
HAPRD-DIAVLRTFSKAYGLAGIRLGYAVVPDSWADAYARVQTPFAASVIACQAGVAALDDDD--HVEATTDSVAWGRDY
IHDELA----AR-TYES--HGNFVLANVG------DAGRVAEAAKREGVLVRDCTSF-GL-PEHVRITIGTRSETERAVA
VLNEV
>SP|Q57004|HI82_HAEIN/8-362
NRGVKSLSPYQAGKPIEELERELGIS--NIVKLASNE---NPFGFPESAKKAIFEQLD----KLTRYPDANGFELKQTIA
KKFG-------------VQPNQITLG-NGSNDLLELFAHTFATEG-DEIMYSQYAFIVYPLVTKAINAIVKEIPAKNW--
-G-HDLQGFLT--ALSDKTKLIYIANPNNPTGNFLTSQEIEDFLAEVPE-NVIVVLDEAYTEFTRSEE-----RVDSFSL
LKKYS-NLIISRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALTAAVAVMNDDK--FVEKVAENNRIEMRR
YEDFCQKN-QLD-YIPS--KGNFITIDFKQ-----PAAPIYDALLREGVIVRPIAGY-GM-PNHLRISIGLPEENDKFFT
ALSKV
>OMNI|NT03PA3641/21-377
QPGVQKLSPYVPGKPVDELARELGIDPAAIVKLASNE---NPLGASPKALEAIRAELA----ELTRYPDGNGFELKRKLA
ERCA-------------VDAAQVTLG-NGSNDILDLVARAYLAPG-LNAVFSEHAFAVYPIATQAVGAEGRAVKARAW--
-G-HDLEAMLA--AIDGQTRVVFVANPNNPTGTWFGADALERFLAQVPA-EVLVVLDEAYIEYAEGDE-----LPDGLDY
LARHP-NLLVSRTFSKAYGLASLRVGYALSSKAVADVLNRVRQPFNVNSLALAAACAALDDHD--YLAQSRRLNDSGMAQ
LEDGFHAL-GLS-WIPS--KGNFIAVDLAR-----DAGPVYQALLREGVIVRPVAGY-GM-PTFLRVSIGLPEENDRFLQ
ALGKV
>OMNI|NT01BS2655/7-362
KEHLKQLKPYQPGKPIEAVKSEYGLD--KVVKLASNE---NPYGCSEAAKEALHHEIQ----QLALYPDGYSAALRTRLS
KHLN-------------VSETSLIFG-NGSDEIIQIICRAFLNDK-TNTVTAAPTFPQYKHNAVIEGAEVREIALRPD--
-GSHDLDAMLE--AIDEQTQVVWICSPNNPTGTYTSEGELLAFLERVPS-RVLVVLDEAYYEYVTAED-----YPETVPL
LSKYS-NLMILRTFSKAYGLAALRVGYGIADENLIRQIEPAREPFNTSRLGQAAAIAALYDQA--FIASCVEQNNAGLQQ
YYDFAKTH-GLK-CYPS--QTNFVLIDFKR-----PADELFQALLEKGYIVRSGNAL-GF-PTSLRITIGTKEQNEEILA
ILAEI
>GP|6967791|emb|CAB72784.1/4-362
NEFLNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNE---NPFGTPPKAIECLRQNAN----KAHLYPDDSMIELKSTLA
QKYK-------------VQNENIIIG-AGSDQVIEFAIHSKLNSK-NAFLQAGVTFAMYEIYAKQCGAKCYKTQSITH--
-NLDEFKKLYE--THKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNEFASFKDSKK--HLEPCEL
IKEFD-NVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDDDE--FTEKTLENNFSQMEL
YKEFAKKH-NIK-IIDS--YTNFITYFFDEK----NSTDLSEKLLKKGIIIRNLKSY-GL--NAIRITIGTSYENEKFFT
EFDKI