HMM Seed Alignment: TIGR00958
Download Alignment>SP|P36371|TAP2_MOUSE/1-696
MALSYLRPWVSLLLADMALLG.LLQGSLGN..LLP..QGLPGLWIEGTLRLGVLWG......LLKVG.........ELLG
LVGTLLPLLCLATPLFFSLRALVGGTASTSVVRVASASWG....WLLAGYGAVALSWAVWAVLSP...............
.AGVQEKE...............PGQENRT........LMKRLLKLSRPDLPFLIAAFFFLVVAVWGETLIPRYSGRVID
ILGGDFD..PDAFASAIFFMCLFSVGSSFSAGCRGGS.........FLFTMSRINLRIREQLFSSLLRQDLGFFQETKTG
ELNSRLSSDTSLMSRWLPFNANILLRSLVKVVGLYFFMLQVSPRLTFLSLLDLPLTIAAEKVYNPRHQAVLKEIQDAVAK
AGQVVREAVGGLQTVRSFGAEEQEVSHYKEALERCRQLWWRRDLEKDVYLVIRRVMALGMQVLILNCGVQQILAGEVTRG
GLLSFLLYQEEVGQYVRNLVYMYGDMLSNVGAAEKVFSYLDRKPNLPQPGILAPPWLEGRVEFQDVSFSYPRRPEKPVLQ
GLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGEPLTEYDHHYLHRQVVLVGQEPVLFSGSVKDNIAYG
LRDCE.DAQVMAAAQAACADDFIGEMTNG.INTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDA....QC
EQALQN..WRSQGDRTMLVIAHRLHTVQNADQVLVLKQG.RLVE...HDQLRDGQD.VYAHLV
>SP|P36372|TAP2_RAT/1-697
MALSHPRPWASLLLVDLALLG.LLQSSLGT..LLP..PGLPGLWLEGTLRLGVLWG......LLKVG.........GLLR
LVGTFLPLLCLTNPLFFSLRALVGSTMSTSVVRVASASWG....WLLADYGAVALSLAVWAVLSP...............
.AGAQEKE...............PGQENNRA.......LMIRLLRLSKPDLPFLIVAFIFLAMAVWWEMFIPHYSGRVID
ILGGDFD..PDAFASAIFFMCLFSVGSSLSAGCRGGS.........FLFAESRINLRIREQLFSSLLRQDLAFFQETKTG
ELNSRLSSDTSLMSQWLSLNANILLRSLVKVVGLYYFMLQVSPRLTFLSLLDLPLTIAAEKVYNPRHQAVLKEIQDAVAK
AGQVVREAVGGLQTVRSFGAEEQEVRRYKEALERCRQLWWRRDLEKSLYLVIQRVMALGMQVLILNVGVQQILAGEVTRG
GLLSFLLYQEEVGHHVQNLVYMYGDMLSNVGAAEKVFSYLDRRPNLPNPGTLAPPRLEGRVEFQDVSFSYPSRPEKPVLQ
GLTFTLHPGKVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGEPLVQYDHHYLHRQVVLVGQEPVLFSGSVKDNIAYG
LRDCE.DAQVMAAAQAACADDFIGEMTNG.INTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSALDA....EC
EQALQT..WRSQEDRTMLVIAHRLHTVQNADQVLVLKQG.QLVE...HDQLRDEQD.VYAHLV
>GP|860725|gb|AAA96713.1|L42939/1-697
MALSYLRPWASLLLVDMALLA.LLQGSPGN..LLP..LGLPGLWLEGTLRLGGLWG......LLAVG.........GLLG
RVGTFPPLLCLATPLFFSLRALVGGTMSSPAVRVASASWV....WLLADYKAAALGWAVWAVLSP...............
.PGAREKE...............AGQEKNKS.......LMWQLLRLSRPDLPFLMVAFFFLAWAVLGETLIPHYSGRVID
ILGSDFD..PXSFASAIFFMCLFSVGSSLSAGCRGGS.........FLFTMSRINLRIRERLFSSLLRQDLGFFQENKTG
ELNSRLSSDTSKMSRWLPYNANILLRSLVKVIGLYCFMLQVSPRLTFLSLLDLPLTIAAEKVYNPRHQAVLTEIQDATAK
AGQVVREAVGGLQTVRSFGAEEQEVSRYKEALERCRQLWWRRDLERALYLAIRRVMALGMQVLILNCGVQQILAGEVTRG
GLLSFLLYQEEVGDYVRNLVYMYGDMLSNVGAAEKVFCYIDRKPNLPQPGTLAPSRLEGRVEFQDVTFSYPSRPXKPVLK
GLTFTLHPGKVTALVGPNGSGKSTVAAPLQNLYQPTGGQLLLDGQPLVQYDHHYLHRQVVLVGQEPVLFSGSVKDNIAYG
LKDCE.DAQVMAAVRAACADDFIGEMPDG.IHTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSALDS....QC
EQALQA..WRSKGDRTVLVIAHRLHTVQNVDQVLVLKQG.QLVE...HSQLREDQD.VYAHLV
>SP|Q03519|TAP2_HUMAN/1-686
MRLPDLRPWTSLLLVDAALLW.LLQGPLGT..LLP..QGLPGLWLEGTLRLGGLWG......LLKLR.........GLLG
FVGTLLLPLCLATPLTVSLRALVAGASRAPPARVASAPWS....WLLVGYGAAGLSWSLWAVLSP...............
.PGAQEKE...............QDQVNNKV.......LMWRLLKLSRPDLPLLVAAFFFLVLAVLGETLIPHYSGRVID
ILGGDFD..PHAFASAIFFMCLFSFGSSLSAGCRGGC.........FTYTMSRINLRIREQLFSSLLRQDLGFFQETKTG
ELNSRLSSDTTLMSNWLPLNANVLLRSLVKVVGLYGFMLSISPRLTLLSLLHMPFTIAAEKVYNTRHQEVLREIQDAVAR
AGQVVREAVGGLQTVRSFGAEEHEVCRYKEALEQCRQLYWRRDLERALYLLVRRVLHLGVQMLMLSCGLQQMQDGELTQG
SLLSFMIYQESVGSYVQTLVYIYGDMLSNVGAAEKVFSYMDRQPNLPSPGTLAPTTLQGVVKFQDVSFAYPNRPDRPVLK
GLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDEKPISQYEHCYLHSQVVSVGQEPVLFSGSVRNNIAYG
LQSCE.DDKVMAAAQAAHADDFIQEMEHG.IYTDVGEKGSQLAAGQKQRLAIARALVRDPRVLILDEATSALDV....QC
EQALQD..WNSRGDRTVLVIAHRLQTVQRAHQILVLQEG.KLQK...LAQL............
>GP|1399905|gb|AAB41964.1/2-716
AAHVW.LAAALLLLVDWLLLRPMLPGIFSL..LVP.EVPLLRVWVVGLSRWAILGLGVRGVLGVTAG.......AHGWLA
ALQPLVAALSLALPGLALFRELAAWGTLREGDSAGLLYWNSRPDAFAISYVAALPAAALWHKLGS...............
.LWAP..................SGNRDAGD.......MLCRMLGFLGPKKRRLYLVLVLLILSWLGEMAIPFFTGRITD
WILQDKT..VPSFTRNIWLMSILTIASTALEFASDGI.........YNITMGHMHGRVHREVFRAVLRQETGFFLKNPAG
SITSRVTEDTANVCESISDTLSLLLWYLGRALCLLVFMFWGSPYLTLVTLINLPLLFLLPKKLGKVHQSLAVKVQESLAK
STQVALEALSAMPTVRSFANEEGEAQKFRQKLEEMKTLNKKEALAYVAEVWTTSVSGMLLKVGILYLGGQLVIRGTVSSG
NLVSFVLYQLQFTQAVQVLLSLYPSMQKAVGSSEKIFEYLDRTPCSPLSGSLAPSNMKGLVEFQDVSFAYPNQPKVQVLQ
GLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGQRLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYG
LNRTPTMEEITAVAVESGAHDFISGFPQG.YDTEVGETGNQLSGGQRQAVALARALIRKPLLLILDDATSALDAGNQLRV
QRLLYE..SPKRASRTVLLITQQLSLAEQAHHILFLREG.SVGEQGTHLQLMKRGG.CYRAMV
>GP|56717|emb|CAA40742.1/17-732
AAHAWPTAALLLLLVDWLLLRPVLPGIFSL..LVP.EVPLLRVWAVGLSRWAILGLGVRGVLGVTAG.......ARGWLA
ALQPLVAALGLALPGLASFRKLSAWGALREGDNAGLLHWNSRLDAFVLSYVAALPAAALWHKLGG...............
.FWAP..................SGHKGAGD.......MLCRMLGFLDSKKGRLHLVLVLLILSCLGEMAIPFFTGRITD
WILQDKT..APSFARNMWLMCILTIASTVLEFAGDGI.........YNITMGHMHSRVHGEVFRAVLHQETGFFLKNPTG
SITSRVTEDTSNVCESISDKLNLFLWYLGRGLCLLAFMIWGSFYLTVVTLLSLPLLFLLPRRLGKVYQSLAVKVQESLAK
STQVALEALSAMPTVRSFANEEGEAQKFRQKLEEMKPLNKKEALAYVTEVWTMSVSGMLLKVGILYLGGQLVVRGAVSSG
NLVSFVLYQLQFTRAVEVLLSIYPSMQKSVGASEKIFEYLDRTPCSPLSGSLAPLNMKGLVKFQDVSFAYPNHPNVQVLQ
GLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYG
LTRTPTMEEITAVAMESGAHDFISGFPQG.YDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRV
QRLLYE..SPEWASRTVLLITQQLSLAERAHHILFLKEG.SVCEQGTHLQLMERGG.CYRSMV
>GP|36061|emb|CAA40741.1/78-800
ASLAW.LGTVLLLLADWVLLRTALPRIFSL..LVPTALPLLRVWAVGLSRWAVLWLGACGVLRATVGSKSENAGAQGWLA
ALKPLAAALGLALPGLALFRELISWGAPGSADSTRLLHWGSHPTAFVVSYAAALPAAALWHKLGS...............
.LWVP..................GGQGGSGN.......PVRRLLGCLGSETRRLSLFLVLVVLSSLGEMAIPFFTGRLTD
WILQDGS..ADTFTRNLTLMSILTIASAVLEFVGDGI.........YNNTMGHVHSHLQGEVFGAVLRQETEFFQQNQTG
NIMSRVTEDTSTLSDSLSENLSLFLWYLVRGLCLLGIMLWGSVSLTMVTLITLPLLFLLPKKVGKWYQLLEVQVRESLAK
SSQVAIEALSAMPTVRSFANEEGEAQKFREKLQEIKTLNQKEAVAYAVNSWTTSISGMLLKVGILYIGGQLVTSGAVSSG
NLVTFVLYQMQFTQAVEVLLSIYPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPLHLEGLVQFQDVSFAYPNRPDVLVLQ
GLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYG
LTQKPTMEEITAAAVKSGAHSFISGLPQG.YDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQV
EQLLYE..SPERYSRSVLLITQHLSLVEQADHILFLEGG.AIREGGTHQQLMEKKG.CYWAMV
>GP|2746911|gb|AAB95060.1/19-753
IGLDLLVNVFGLAWNGKYFTFDNIAHWFDL.ANYSFLKNPAVALIRDSILLG.GAVSAWASPSGFSQ..........VAE
NVKNVVFAMMLLIVAFAPSKLLAFYE..DDNIRLAVGDWI....LMIWCIFASLLLQGIWTSVLAH........VTEVAA
GTGDSLLFGDAE...HEERLR..QEEAEKAAEQRETFQLLFRLLGYMGRQWKYYGMAFFFLFCYSLSRVFIPYYTGEVVT
AVFGDKAS.YEKLHKTVFIMGMLSLASTVFGGLRGGS.........FTYAHATIDRQIRNDLFRSVVKQEIGFFDMNKTG
EICSRLSADCQTMSNTLSLYMNVLTRNLTMLFGSLIFMFTLSWKLSMITLINIPIIFLVNKIFGVWYDMLSEETQNSVAK
ANDVAEEVLSSIRTVKSFACENYESSRFMTFLNVTLKIATRKVFVVIGLIWSNELLQMGILTIVLWYGGHLVIENKVESG
LLVSFLLYQFQLGENLRELGEVWNGLMQAVGASRKVFEFIDRPPRVENTGTYAPDGMTGKIEFRHVAFSYPIRPDLPIME
DLTFTVEPGEVVALVGPSGGGKSSCIAMLEHFYEPTSGEVLIDGVPVREYDHKFLHTKVALVGQEPVLYARSVTENIGYG
LDKYD.DDMVQNSAKLANAHTFIMNDTTDGYNTNVGEKGSQMSGGQKQRIAIARALVRQPVVLLLDEATSALDA....ES
EHTVQEAISKNLKGKTVILIAHRLSTVENADKIVVINKG.KVEQLGNHKTLMEQEG.LYKQLV
>GP|3790658|gb|AAC68724.1/16-617
ASIDFLACLLFACLHDGTFKFANFTSQFG...DFSFFTSTIDLFLLQFFRFALWMVPAAIHVANKAD..........TLT
MWKEPIFCSALLICAASPTKLLLLTEKLKPDEFLTFGDTA....FLVWNFISAIILNSSWTRYFS...............
RTPSSYII........LE.....DEDLEVAP..KQTFELIFRLLQYCKREWLWHISGFSWLFIYSITRIFVPYYTGQVIA
TVVATKS..YPALSNAVYIMTIISLVSAVAAGFRGGS.........FEYAYARIQRAIRYDLFHGLVKQDVAFYDAHKTG
EVTSRLAADCQTMSDTVALNVNVFLRNCVMLLGSMIFMMKLSWRLSLVTFILVPIIFVASKIFGTYYDLLSERTQDTIAE
SNDVAEEVLSTMRTVRSFSCENVEADRFYGKLTHTLDVTRTKAIAYIGFLWVSELFQSFIIVSVLWYGGHLVLTQKMKGD
LLVSFLLYQMQLGDNLRQMGEVWTGLMQSVGASRKVFEYIDREPQIQHNGEYMPENVVGKIEFRNVHFSYPTRSDQPILK
DLSFTVEPGETVALVGPSGSGKSSCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKVR........WR..........
.......................................QFR......................................
.......FDKSFAGLPAILIFGKLPICRKCLECFFIRR.....................KHLK
>GP|1947137|gb|AAC71121.1/3-749
IDAAITNVSFGYFAPGWKFNYDSFLGIITFSLPYHFTTTPYEFQIFSFIRQSFCAIAVLLIILNKRE..........KVK
VLFPVVICNAVVVYSLSLIKFLAFSE..DSNQLYFPGLWF....SVIWSILSGFIQVLVWYFVFTSNPFDYHRLLNTTAE
NAGTSVTETAAETVRDTETASNVESGSSTAP.RAPLHKVLLRLLSYCGHQWPWFASGFVFLTVYALARVFIPNYTAQVIS
DIVNKRG..IQALIHSIIVLTCLTATSSLFGGLRGGC.........FDYATALVTLRIRLDLFTSLIRQDIAFYDTAKTG
DTMSRLTSDCQTISSTVSTNVNVFMRNGVMLIGALAFMILMSWRLAMVTFIAVPLVGFITKAYSSFYDKISEKLQQTIAE
TNQMAEEVVSTMRTVRSFACEKKELKRFEDRLSSTLSVNRKKSIAYLFYTWNNEFCDNAILVAVLFYGGHLVMTGKMEKE
QLITFLLYQMQLGENLYYLSYVMSGLMEAVGASRKVFDLMNRKPQFELDGMQRP.FVNGNITFSHVGFTYPSRPNNPVLK
DLTLSIKSGETVALVGPSGGGKSSIVSLIEHFYEPDEGSVTLDGVPIKDINHVYYHQKVALVAQEPVLYNGSVRHNILYG
CDFAT.EDDMLNASKMANVHDFVMELEKG.YDTNCGEKGVQMSGGQKQRIAIARALVRNPAVLILDEATSALDT....ES
EALVQQALSRCAQERTVIIVAHRLSTIEKANKIAVIVKG.CLVQMGTHTELMTDTDGMYYSLV
>SP|P33311|MDL2_YEAST/1-732
.MKTYVLLYGKLIMTTMILNTGRFEEWYKVCIIALKEKEIYVPSSPIAMLNGRLPLLRLGICRNMLS.........RPRL
AKLPSIRFRSLVTPSSSQLIPLSRLCLRSPAVGKSLILQS.....FRCNSSKTVPETSLPSASPIS..............
.KGSAR.S........AH....AKEQSKTDDYK.....DIIRLFMLAKRDWKLLLTAILLLTISCSIGMSIPKVIGIVLD
TLKTSSGSDFFDLKIPIFSLPLYEFLSFFTVALLIGCAANFGRFILLRILSERVVARLRANVIKKTLHQDAEFFDNHKVG
DLISRLGSDAYVVSRSMTQKVSDGVKALICGVVGVGMMCSLSPQLSILLLFFTPPVLFSASVFGKQIRNTSKDLQEATGQ
LTRVAEEQLSGIKTVQSFVAEGNELSRYNVAIRDIFQVGKTAAFTNAKFFTTTSLLGDLSFLTVLAYGSYLVLQSQLSIG
DLTAFMLYTEYTGNAVFGLSTFYSEIMQGAGAASRLFELTDRKPSISPTVGHKYKPDRGVIEFKDVSFSYPTRPSVQIFK
NLNFKIAPGSSVCIVGPSGRGKSTIALLLLRYYNPTTGTITIDNQDISKLNCKSLRRHIGIVQQEPVLMSGTIRDNITYG
LTYTPTKEEIRSVAKQCFCHNFITKFPNT.YDTVIGPHGTLLSGGQKQRIAIARALIKKPTILILDEATSALDVESEGAI
NYTFGQ..LMKSKSMTIVSIAHRLSTIRRSENVIVLGHDGSVVEMGKFKELYANPTSALSQLL