HMM Seed Alignment: TIGR00946
Download Alignment>SP|O27435|YD82_METTH/1-302
.MIFMGSTETVLSVLVLVLLGYIL.....KVLGVLGEEDASTLNRVVINVAIPSLIFTSLYR.........ADLSGISDL
VLIPVICMITGTLSGTIAYLWARRR..............GLD..S.GKTWGLTVAAAMMNSGFLGYPVTAGIFGSEG...
LVRAIFYDTGTTLMFTSLGLLLSHISG.....................................................
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...............................................GEGS.............................
......................RIMKRAVFFPPLWAFLLGVIFNLWGLPTG..IAGTILG...YLSGAAVPLIMISLG..
LTLNFRFLRHSVADATLVSGLRLLISPLMAAGISYVLA..FRGLNFSVTVLEASMPSAMLAAVLAIENDLDVDLVSSCIF
MSTILSLVSLPLWSVVL...
>SP|Q58437|YA31_METJA/1-308
.MIPM...DVVLIVLILVLVGYFS.....KIFGILKEEHAKILNNIVIYIAMPSTIFLTISKN........VSSSQILEF
LKLPVVIFLCCLFVGILAYLLGKHIF.............KLK..D.EKLGGLILVSMLGNTGFLGYPVALGMFGEEG...
LARAIFCDLGGVFATMLLGTYVGIRFG.....................................................
....K...........................................................................
................................................................................
...............................................GRDK.............................
......................SILKDMAKFPPLITGILSIILVFFGFKLNY.IPSFILKSLNYLSSATVPLIMMSLG..
LSLSPKALKFGVFWGIIASIFRFIVSPATAFTLSELIN..IKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIF
ITTTFSLLVIALWGWILLN.
>OMNI|NTL01AA00970/1-292
.MFIY...EKVFFILLIIAFAYTL.....KRGGIFKEEHALPFINYVIYFALPFTIFKNLR...........FLE..IGK
EVLGVVLIAWGAIFLSILFAFLFGK...............FLKLEEKTLRAFLLVSSFGNTAFMGYPFLYALEGNEG..L
KYAILYDQLGSFLMVITLGLFLA..IG.....................................................
....K...........................................................................
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......................FDLKELILFPPFIALVLSFLLHGVRF......PQFFEHSVEIISGSLIPVILFSLG..
LRLNFTDMKSDYRTLFSALFIKMFLVPLLILVFLKIFG..LTSLPYRVALIESAMPPMVFAGVLALKYELDFRLAFSAIT
LGIVISLFTVPVFRILL...
>GP|5870596|emb|CAA57770.2|X82326/1-314
MNAFITSVESVVEIVLVIALGYVL.....RRSGKLADSFKGNISYLIMNIALPLSIFVSVLT..........YLTRDKLV
SLSGGLVFAAASFAVSYVLAYLITK...............IFKIRVGRRGTFINMFVNANTIFIGLPLNSALFGTKS...
MPYFLIYYVMNTISTWAIGIFFISSDD.....................................................
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....................P..........................TRDKTE..............K.QS.........
......................FNWKKLLPMP.LVGFLISIVVLLLAIP....IPGWVSTTFSMVGGIVTPMSLIYIGII
LADAGLKSIHFDRDSILALIGRFIIVPAVMIIILKLFGGSMPKLESSTLIIQAAAPGLAVLPILVGQNHGDVEYATNVVT
TSTVLFVIVVPILMQFV...
>GP|5817305|gb|AAD52697.1/1-619
.MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAADTLQK
LIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKI
LIMEQFPETGASIVSFKVESDVVSLDG.HDFLETDAQIGDDGKLHVTVRKSNASR...RSFYGG...GGTN..MTPRPSN
LTGAEIYSL....NTTPRGSNFNHSDFYSMMGF......PGGRLSNFG......PADMYSVQSSRGPTPRPSNFEESCAM
ASSPR........FGYYPGGAPGSYPAPNPEFSTGNKTGSKAPKENHHHVGKSNSN....DAKELHMFVWGSNGSPVSDR
AGLQVDNGANEQVGKSDQGGAKEIRMLISDHTQNGENKAGPMNGDYGGEEESERVKEVPNGLHKLRCNSTAELNPKEAIE
TGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLF
MALQPKLIACGNSTATFAMAVRFFTGPAVMAVAAMAIG..LRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVI
FGMLIALPITLVYYILLGL.
>GP|3377509|gb|AAC39514.1/1-595
.MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQK
LMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARM
LITEQFPDTAANIASIVVDPDVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASR...SDIYSRRSMGFSS..TTPRPSN
LTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV..........GRSSNFG......AADAFGVRT..GATPRPSNYEDDASK
PKYPL........PASNAAPMAGHYPAPNPAVSSAPKGAKKAATN.....GQAK.......GEDLHMFVWSSSASPVSDV
FG...G.GAPDYNDAAAVKSPRK..M...DGAKDREDYVERDDFSFGNRGVMDRDAEAGD....EKAAAAAGADPSKAMA
A...P..TAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLF
MALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVG..LRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPSILSTAVI
FGMLIALPITLVYYILLGL.
>GP|3377507|gb|AAC39513.1/1-647
.MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQK
VVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKL
LISEQFPETAGSITSFRVDSDVISLNG.REPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASN
LTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPRHGYTNSYGGAGAGPGGDVYSLQSSKGVTPRTSNFDEEVMK
TAKKAGRGGRSMSGELYNNNSVPSYPPPNPMFTGSTSGASGVKKKESGGGGSGGGVGVGGQNKEMNMFVWSSSASPVSEA
N....AKNAMTRGSSTDVSTDPKVSIPPHDNLATKAMQNLIENMSPGRKGHVEMDQDGNNG....GKSPYMGKKGSDVED
GGPGPRKQQMPPASVMTRLILIMVWRKLIRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLF
MALQPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIG..IRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVI
FGMLVALPVTVLYYVLLGL.
>GP|2240016|gb|AAC45458.1/1-319
..MTYVIIHALAPIFVIMLLGFWAG.....KAGMVDNKNVSLLNIFVMDFALPATLFSATVQ..........TPWA.GIV
AQSPLVLVLTGAMWITYAAIYFLAT..............SVFKRTPQDAAVLTLTVALPNYAALGLPILGSVLGEGASTS
LSVAVSIACGSVLMTPFCLLILEREKAR....................................................
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.............................................AAGENSG..................S.........
................TLAMLPVLMWRSVKKPIVWGPLLGVVLSAIGIK....MPDLLLASIKPLGLAATAAALFLTG..
VILSARKLQLN.ALIATSTIVKLLVQPFIAWGLVMLLG..LHGSIAITAILMIALAAGFFGVVFGNRFGVQSPDAEAVLL
LSSVLCILSLPLFISLTSGL
>SP|P45869|YWKB_BACSU/1-319
.MSILDILILLAPIFFVIVLGWFAG.....HFGSYDAKSAKGVSTLVTKYALPAHFIAGILT..........TSRS.EFL
SQVPLMISLIIGIVGFYIIILLVCR..............FIFKYDLTNSSVFSLNSAQPTFAFMGIPVLGSLFGANEVAI
PIAVTGIVVNAILDPLAIIIATVGESS.....................................................
................................................................................
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.............................................KKNEESGD...........................
.............S..FWKMTGKSILHGLCEPLAAAPLISMILVLVFN...FTLPELGVKMLDQLGSTTSGVALFAVG..
VTVGIRKIKLS.MPAIGIALLKVAVQPALMFLIALAIG..LPADQTTKAILLVAFPGSAVAAMIATRFEKQEEETATAFV
VSAILSLISLPIIIALTA..