HMM Seed Alignment: TIGR00940

Download Alignment

>OMNI|NTL01BH1322/4-804
LHWATVSPFLLAIFIPILYKYTRSIHTGWFVLVLPLVLFGYFLSLLPITSNGGVIHETIPWVPSLGINFTVYVDGLSLLF
ALLITGIGTLVALYSIYYLSKKTEKLNNFYVYLLMFMGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFHREKSTYGA
QKSMLITVFGGFAMLGGFSLLYVITGTFSIREIIEQADAVLASTLFLPAMLLVLLGAFTKSAQFPFHIWLPDAMEAPTPV
SAYLHSATMVKAGLYLVARLTPVFGGTPEWFWLLAGFGIITLCWGSISAVRQKDLKSILAFSTISQLGLIMCLFGLGSAT
LHFDPTDSMIKFYATATLAAVFHLINHATFKGSLFMTVGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLAAMAGLPPF
NGFLSKEMFFSGVVTATTLGIFNMETWGFLFPVLAWVASVFTFVYCAIMFFRTFTGEFKKENYDVHVHEAPMGMLISPVI
LGSLVVIFGLFPNLLTYTIIEPAVTAILGADVFGGGEANIYLWHGFNPELFMTIAVVAFGTLIFMNMKKWQQTAFYLRER
DPLN...RVYDSSLDWLIKGSQGITRVQMTGMLRDYFAYMCVFMILLFGYTMVRYNAFAIDTVNVSVISPYMWVLTLVFI
GSTLAIPFIN..HRITAIIVVGVIGFLLALFFVIFRAPDLALTQLLVETVTVVLFMLAFYHLPELRKEKFTPRFNLVNLF
ISIGVGGLVTLIALSSFALGTEAGLGTISEYFIENSKELAGGYNMVNVILVDFRGLDTLLEVLVLGIAALGVIAMIKLR.
..MTGREDV....
>GP|4001725|dbj|BAA35095.1/4-801
LHIAVILPLIFALIIPILYRFFKRIHLGWFVLSVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLF
SLLISGIGSLVVLYSIGYLSK.SEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGA
QKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPV
SAYLHSATMVKAGLYLIARMTPIFAASQGWVWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAIS
YHYQGDDS..KIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPF
NGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAI
LATLVIVFGLFPGILTNSIIEPATSSIN.HTVID..DVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGK
LTFN...YWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLT.FVTIFSVPFNINFKDVSPIRIFEVCIVILLL
SAAFLILFAK..SRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNAL
IAGGVGLSVIIIGLIAYGN...RHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRK
KRQTQGNEVKNHE
>GP|1072395|emb|CAA63734.1/31-725
LLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGVLHYRIDWVPELGLNFTLRMDGFAWLF
SALITAIGVLVVLYARYYMAE.EDPVPRFFALFLAFMGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDAA
RMALTITGTGGLAMFVGLIIIGKIVGSYELDAVLASGDAIRNHPLYGTVLVLVLLGALTKSAQFPFHFWLPHAMAAPTPV
SAYLHSATMVKAGVFLLVRFWPVMAGTEAWFWIVGLAGLTTLLLGAYFAIFQQDLKGLLAYSTISHLGLITVLLSLGSP.
..............LAAVAAVFHIVNHATFKASLFMAAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLL
NGFLSKEMFFAEAIETHLVNPLDTVT.....PYVATIAGMFAVTYSLRFIHGVFFGRP.PADLPRKPHEPPRWMRAPLDF
LVLACLVVGIIPAQTIGPFLHTAVLSVLREGTPD...YSLSVWHGWNIPLIMSFVALSGGIGLYFLMRSYLATAVEGPPV
FRLLQGQRIFERVLVTLSWKWARWLEQRLGTRRLQPQMRLLVFLALAAGASPLLLGNFELPPLVIRGIDPAFALLWAIGI
ACAIGSAYQAKFHRLASLVLLGGAGLVTCITFVWLSAPDLAVTQLLVEIVTTVLILLGLRWLPKRIEEPVAAKTSRSGSA
................................................................................
.............