HMM Seed Alignment: TIGR00806
Download Alignment>SP|P41438|FLO1_MOUSE/1-512
MVPTGQVAEKQAYEEPRQDHELKSWRCLVFYLCFFGFMAQLRPGESFITPFLL..ERKFTKEQVTNEIIPMLPYSHLAVL
VPVFLLTDYLRYKPVLVLQCLSFVCVWLLLLLGTSVVHMQLMEVFYSVTMAARIAYSSYIFSLVHPSRYQRMASYSRAAV
LLGVFISSVLGQALVTVGHIS..TYTLNCVSLGFILFSLVLSLFLK.RPKRSLFFNRSTLAR.GALPCELDQMHPGPDRP
ETRKLDRMLG.TCRDSFLVRMLSELVENARQPQLRLWCLWWVFNSSGYYLITYYVHVLWRSTDSSLS....YNGAVDAAS
TLLSAITSFSAGFLSIRWTLWSKLVIAGVIAIQASLVFCMFQIR......DIWVCYVTFVLFRGAYQFLVPIATFQIASS
LSKELCALVFGINTFLATALKTCITLVVSDKRGLGLQVRDQFRIYFIYFLMLS..ITCFAWAGLDGLRYCQRGRHQ....
.PLAQAQELR.SPLETSVQAISLQDGDLRGP...QPSAPQLLSEDG........MEDDRGDLRVEAKA............
.....................................................
>gi|1022955|gb|AAC61788/1-512
MVPTGQVGEKQACEEPRQDRELKSWRWLVFYLCFFGFMAQLRPGESFITPYLL..ERNFTKEQVTNEIIPMLPYSHLAVL
VPIFLLTDYLRYKPVLVLQCLSFVCVWLLLLLGTSVVHMQLMEVFYSITMAARIAYSSYIFSLVQPSRYQRMASYSRAAV
LLGVFISSVLGQVLVTLGGIS..TYMLNCISLGFILFSLSLSLFLK.RPKRSLFFNRSALVQ.GALPCELDQMHPGPGRP
EPRKLERMLG.TCRDSFLVRMLSELVKNVRQPQLRLWCLWWVFNSAGYYLITYYVHVLWKITDSRLN....YNGAVDAAS
TLLSAITAFTAGFVNIRWALWSKLVIASVIAIQAGLVFCMFQIP......DIWVCYVTFVLFRGAYQFLVPIATFQIASS
LSKELCALVFGINTFLATALKTSITLVVSDKRGLGLQVHQQFRIYFMYFLTLS..IICLAWAGLDGLRYYRRGRHQ....
.PLAQAQAL..SPLEDSVQAISLQDGDLRRP...QPSAPQLLPEDGS.......VEDGRADLRVEAKA............
.....................................................
>SP|P42557|FLO1_CRIGR/1-518
MVPTGQVAEKQACEEPRQDRELKSWRCLVFYLCFFGFMAQLRPGESFITPYLL..QQNFTIEQVTNEIIPVLPYSHLAVL
VPIFLLTDYLRYKPILILQCLSFMCVWLLLLLGTSVVHMQLMEVFYSVTMAARIAYSSYIFSLVRPSRYQRMASYSRAAV
LLGVFTSSVLGQVLWPLEQKSQNSNMLNYISLGFIIFSLGLSLFLK.RPKHSLFFNRSALVH.KALPCELDQMHPGPGRP
EPGKLERVLG.SCRNSFLVCMLSELVGNLRQPHVRLWCLWWVFNSAGYYLIVYYVHVLW.SIDKNLN....YNGAVDAAS
TLLSAITSFSAGFVKIRWALWSKLVIASVIAIQAGLVFCMYMVHYVTWVHKIWVLYMTYVLFRGAYQFLVPIATFQIASS
LSKELCALVFGINTFLATALKTAITLVVSDKRGLGLKVEKQFCIYSVYFMVLS..VICFVGAVLDGVRYCRRGRHQ....
.PLPLPQEL..SPLENSVQVPSMQDRGLGGL...QPSAPQLLPEDG........VEDSEASLRAEAKA............
.....................................................
>PIR|JC2468|JC2468/1-590
MVPSSPAVEKQVPVEPGPDPELRSWRRLVCYLCFYGFMAQIRPGESFITPYLLGPDKNFTRDEVTNEITPVLSYSYLAVL
VPVFLLTDYLRYTPVLLLQGLSFVSVWLLLLLGHSVAHMQLMELFYSVTMAARIAYSSYIFSLVRPARYQRVAGYSRAAV
LLGVFTSSVLGQLLVTVGRVS..FSTLNYISLAFLTFSVVLALFLK.RPKRSLFFNRDDRGRCETSASELERMNPGPG..
..GKLGHALRVACGDSVLARMLRELGDSLRRPQLPLWSLWWVFNSAGYYLVVYYVHILWNEVDPTTNSARVYNGAADAAS
TLLGAITSFAAGFVKIRWARWSKLLIAGVTATQAGLVFLLAHTRHPS...SIWLCYAAFVLFRGSYQFLVPIATFQIASS
LSKELCALVFGVNTFFATIVKTIITFIVSDVRGLGLPVRKQFQLYSVYFLILS..IIYFLGAMLDGLRHCQRGHHP....
.RQPPAQGLRSAAEEKAAQALSVQDKASEACS..QPRARRFPQKTAWGLWGQPPWSRDRATHTCPAPAPQAAEFLSPVTT
PSPCTLSSAQASGPEAADETCPQLAVHPPGVSKLGLQCLPSDGVQNVNQ....
>gi|2911843|gb|AAC04414/1-424
.....................MEQWKVMVL.ICMYGAVKEFRPTEPYMYEYQHT.VLNMSEQTLNSQVYPIWTYSYLITL
IPAFLLTDVFLYKPLLVFEAFSYFLCWVIFVFGKSVWSQQVLEVFYGWATATEIAYFAYIYVKVPKTEYKSATAFTRAAL
LVGRFLAYALAQLLIGLNWTS..YSTLNIISLVAMTIAVFLALILPGVEWKEAYEKKLEDNN...VQGNLKEIVDQSS..
....YMDYLR.....MFFVGLRHNLMAIYRNPLILKWSVWSALSSCIFYQVTNYTQTLWGTLPESANR...YNGITEALV
PLLGIPADLITRQLNVNWNRWGDLLLAVGSIGQAGLLFWMSQSH......HIVVLYLSYIFYRVIYQLTTTIAQSTLAFS
LDSRLFGLLFGINTFVALLLQSILTAVVIDWQKL..DIRPQFVVYSCYHLVVAFGFAIIFG.IWASRRFFKTSTN.....
................................................................................
.....................................................
>gi|1458343|gb|AAB04886/1-535
.....................MGQWKVMIL.ICLYGAVKEFRPTEPYMYEYQHT.VLNISEHTLN...............
.......NVLLYKPILIIEALSYFACWMIFVFGRSVWCMQLLELFYGWATATEIAYFAYIYVKVPKEDYKSATAYTRAAL
LVGRFLAYTLAQLLIGLNWAD..YMTLNIINLVSMTFAVFLAAILPHVPWRNAYQKKLEDKK...SVTDLESLVSEAK..
....YSDYLK.....LFFVELHQNLYTIYKNPLVLKWSIWSALSSCIFYQIINYTQTLWGTLPEKENK...YNGIPEALV
PLLGIPADLITRQMNVNWNRWGDALISVGSLLQAGLLFWMSQSH......EIIILYICYIIYRVIYQLTTTIAQSTLALT
LDSRLFGLLFGINTFVALALQSILTAIVIDAEKL..AIRAQVDFHLNKNILFGSFSVCEFGRAMGNAGKGKRPTEYNVEE
DEFAPRHQREVDPEQEAQRQQVLGDRQRRMDRVAEPHWVHRMELEPTVS.....HWLDRKPLMYDFQFPCILQ.ICLVPN
AKKKLIDFEGICYILYGHLRCPTEECFFKDFQPFEISLSRRNVKINRDRLESK