HMM Seed Alignment: TIGR00804
Download Alignment>gi|2291114|gb|AAB65255/141-547
LTGFGGYVFFVIFMVVFSNRPRKINWNIVTSALIFHYCLALIVLKWPTGRWFFDQLSQLIIGLLEYAQVGAKFVFGFIAG
PPNICDLAP....VFIFTSLQTLIYFSAVVALLFYFGIIQIALKKSTWFMKVLIGTTPVESVYSWACTFLGQTEAPLVIK
PYLEKLTDSELFAVLTSGFSCTGGTVFAAYVALGACPESILTASILSAPMSLACSKLMYPEEQETIIK.EEDFELDHENE
KGFFDTLCSAGVALVPTVFAIGATLVVVMSLLALLDQIFFYIGDLIGYDGWSFQMLFGYAFFPLAYIMGITNNSNQTLLV
AQLMGSKTAVNEFVAYDKLGQLQKEGK.............LDPKSVLVATYALCGFSNFGSMGIQMEVIGGLAP.GRKTV
ASKVMLRALCAGAIACFMNATVAG.IL
>gi|2291115|gb|AAB65256/227-633
LTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYCVALIILKWSTGQWFFQKFAELIVGFLEFAQVGAKFVFGFIAG
PPNICDLAP....VFIFTSLQTLIYFSAVVALLFYFGIIQVVLQKSQWFMKVLIGTTPVESVNAWACTFLGMSEAPLMVA
PYIEKLTDSEIFAIVTSGFACVAGTVFTAYVALGACPIYLLTASLLSAPMSLACSKIMFPETEESNVK.EEDFKLEHNDK
RGFFDTLCSAGVALVPTVFAIGATLVVIMSLLAFLDAVMEYIGDLIGYDGWTFQMLFGYAFFPLAYMMGVNDNSDQTLLV
AQLMGTKTAVNEFVAYNNLGILQKAGK.............LQPKSVVIATYALCGFSNFSSMGMSIEFLGGLAP.SKRST
ISKLVLRALCAGSIACFMNATVAG.IL
>SP|P44742|YEIM_HAEIN/4-409
LSSILGMVVLIAIAVLLSNNRKAISIRTVVGALAIQVGFAALILYVPAGKQALGAAADMVSNVIAYGNDGINFVFGGLA.
DPSKPS.....GFIFAVKVLPIIVFFSGLISVLYYLGIMQVVIKVLGGALQKALGTSKAESMSAAANIFVGQTEAPLVVR
PYIKNMTQSELFAIMVGGTASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAKLMFPQTEQFTDKQPEDNDSEKP..
TNVLEAMAGGASAGMQLALNVGAMLIAFVGLIALINGILSGVGGWFGYGDLTLQSIFGLIFKPLAYLIGVTD.GAEAGIA
GQMIGMKLAVNEFVGYLEFAKYLQPDSA.....I.....VLTEKTKAIITFALCGFANFSSIAILIGGLGGMAP.SRRSD
VARLGIKAVIAGTLANLMSATIAG.LF
>gi|2314337|gb|AAD08224/6-412
LFSVVGMAVLFLIAWVFSSNKRAINYRTIVSAFVIQVALGALALYVPLGREMLQGLASGIQSVISYGYEGVRFLFGNLA.
PNAKGDQGI.GGFVFAINVLAIIIFFASLISLLYYLKIMPLFINLIGGALQKCLGTSRAESMSAAANIFVAHTEAPLVIK
PYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISS..HADVSIEKH..
VNAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIP..WSQAGIA
GEIIGIKIALNEFVGYMQLLPYLGDNPP.....L.....ILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVP.KKKDL
IVRLALKAVLVGTLSNFMSATIAG.LF
>SP|P33024|YEIM_ECOLI/4-412
MRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLV.
GPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVK
PFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPP.
KSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVD..WSDANLA
GSLIGQKLAINEFVAYLSFSPYLQTGG............TLEVKTIAIISFALCGFANFGSIGVVVGAFSAISP.KRAPE
IAQLGLRALAAATLSNLMSATIAG.FF
>gi|2072786|gb|AAB53839/179-591
LVSFAGICVFIALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRIFLSYTKAGSSFVFG....
EALVKD.......VFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVTMGTTATETLSVAGNIFVSQTEAPLLIR
PYLADMTLSEVHVVMTGGYATIAGSLLGAYISFGIDATSLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDA
QNLIEAASTGAAISVKVVANIAANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVA..WEDCPVV
AELLGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGNRKQWISVRAEVLTTFALCGFANFSSIGIMLGGLTSMVP.QRKSD
FSQIVLRALFTGACVSLVNACMAGILY
>gi|3169734|gb|AAC17947/178-590
LVSFGGICVFILLLFAGSKHHRAVSWRAVSWGLGLQFALGLFVIRTEPGFIAFQWLGDQIQIFLSYTEAGSSFVFG....
EALVKD.......VFAFQVLPIIVFFSCAMSVLYYVGLMQWVILKISWLMQATMGTTATETLSVAGNIFVSQTEAPLLIR
PYLADMTLSEIHVVMTGGYATIAGSLLGAYISFGIDAASLIAASVMAAPCALALSKLVYPEVEESKFKREEGVKLTYGDA
QNLLEAASSGAAMSVRVVTNIAANLIAFLAVLAFINAALSWLGDMVDVQGLSFQLICSYVLRPVAFLMGVA..WEDCPVV
AELLGMKLFLNEFVAYQELSGYKQRRLAGAEEWVGSRKQWISVRAEILTTYALCGFANFSSIGIMLGGLTSMVP.QRKGD
FSQIVLRALCTGACVSLVNACVAGILY
>SP|Q62674|CNT1_RAT/179-591
LVSFAGICVFLVLLFAGSKHHRAVSWRAVSWGLGLQFVLGLFVIRTEPGFIAFQWLGDQIQVFLSYTEAGSSFVFG....
EALVKD.......VFAFQVLPIIIFFSCVMSVLYYLGLMQWVILKIAWLMQVTMGTSATETLSVAGNIFVSQTEAPLLIR
PYLADMTLSEVHVVMTGGYATIAGSLLGAYISFGIDAASLIAASVMAAPCALALSKLVYPEVEESKFRSENGVKLTYGDA
QNLLEAASAGAAISVKVVANIAANLIAFLAVLAFVNAALSWLGDMVDIQGLSFQLICSYVLRPVAFLMGVA..WEDCPVV
AELLGIKFFLNEFVAYQELSQYKQRRLAGAEEWLGDKKQWISVRAEILTTYALCGFANFSSIGIMLGGLTSLVP.QRRSD
FSQIVLRALITGAFVSLLNACVAGILY
>gi|3396077|gb|AAC28858/176-588
LISFAGICMFILILFACSKHHSAVCWRTVFWGLGLQFIFGILVIRTEPGFNAFQWLGDQIQIFLAYTVEGSSFVFG....
DTLVQN.......VFAFQSLPIIIFFGCVMSILYYLGLVQWVIQKVAWFLQITMGTTAAETLAVAGNIFVGMTEAPLLIR
PYLADMTISEIHTVMTGGFATIAGTVLGAFISFGIDASSLISASVMAAPCALALSKLVYPEVEESKFKSKEGLKLPRGEE
RNILEAASNGATDAISLVANVAANLIAFLAVLAFINATLSWLGEMVDIHGLSFQVICSYVLRPMVFMMGVQ..WADCPLV
AEIVGVKFFINEFVAYQQLSQYKNKRLSGVEEWINGEKQWISVKAEIITTFSLCGFANLSSIGITLGGLTSMIP.QRKSD
LCKIVVRALFTGACVSFISACMAGILY
>gi|4097697|gb|AAD00159/175-587
LISFAGICMFILILFACSKHHSAVSWRTVFWGLGLQFVFGILVIRTEPGFNAFQWLGDQIQIFLAYTVEGSSFVFG....
DTLVQS.......VFAFQSLPIIIFFGCVMSILYYLGLVQWVIQKIAWFLQITMGTTAAETLAVAGNIFVGMTEAPLLIR
PYLADMTLSEIHAVMTGGFATIAGTVLGAFISFGIDASSLISASVMAAPCALALSKLVYPEVEESKFKSKEGVKLPRGEE
RNILEAASNGATDAIGLVANVAANLIAFLAVLAFINSTLSWLGEMVDIHGLTFQVICSYVLRPMVFMMGVQ..WADCPLV
AEIVGVKFFINEFVAYQQLSQYKNKRLSGVEEWINGEKQWVSVKAEIIATFSLCGFANLTSIGITLGGLTSMVP.QRKSD
LCKLVVRALFTGACVSFISACMAGILY
>gi|2731439|gb|AAC51930/174-586
LIPFAGICMFILILFACSKHHSAVSWRTVFSGLGLQFVFGILVIRTDLGYTVFQWLGEQVQIFLNYTVAGSSFVFG....
DTLVKD.......VFAFQALPIIIFFGCVVSILYYLGLVQWVVQKVAWFLQITMGTTATETLAVAGNIFVGMTEAPLLIR
PYLGDMTLSEIHAVMTGGFATISGTVLGAFIAFGVDASSLISASVMAAPCALASSKLAYPEVEESKFKSEEGVKLPRGKE
RNVLEAASNGAVDAIGLATNVAANLIAFLAVLAFINAALSWLGELVDIQGLTFQVICSYLLRPMVFMMGVE..WTDCPMV
AEMVGIKFFINEFVAYQQLSQYKNKRLSGMEEWIEGEKQWISVRAEIITTFSLCGFANLSSIGITLGGLTSIVP.HRKSD
LSKVVVRALFTGACVSLISACMAGILY
>GP|1408507|dbj|BAA08338.1|D45912/4-393
LIGIIGLIVFLGLAWIASSGKKRIKIRPIVVMLILQFILGYILLNTGIGNFLVGGFAKGFGYLLEYAAEGINFVFG....
GLVNADQT.....TFFMNVLLPIVFISALIGILQKWKVLPFIIRYIGLALSKVNGMGRLESYNAVASAILGQSEVFISLK
KELGLLNQQRLYTLCASAMSTVSMSIVGAYMTM.LKPEYVVTALVLNLFGGFIIASIINPYEVAK.EEDMLRVEEEEK..
QSFFEVLGEYILDGFKVAVVVAAMLIGFVAIIALINGIFNAVFG......ISFQGILGYVFAPFAFLVGIP..WNEAVNA
GSIMATKMVSNEFVAMTSLTQNGFHFS...............GRTTAIVSVFLVSFANFSSIGIIAGAVKGLNE.KQGNV
VARFGLKLLYGATLVSFLSAAIVGLIY
>SP|P33031|NUPC_ECOLI/5-400
LHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFG....
SMNDQGLA.....FFFLKVLCPIVFISALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYK
DILGKISRNRMYTMAATAMSTVSMSIVGAYMTM.LEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEG..
QSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYS.ISFQGILGYIFYPIAWVMGVP..SSEALQV
GSIMATKLVSNEFVAMMDLQKIASTLS...............PRAEGIISVFLVSFANFSSIGIIAGAVKGLNE.EQGNV
VSRFGLKLVYGSTLVSVLSASIAALVL
>SP|P42312|YXJA_BACSU/4-395
LLNLVGLIVIMAVVFLCSPQKKKIKWRPIITLIVLELLITWFMLGTKVGSWAIGKIGDFFTWLIACASDGIAFAFP....
SVMANET.....VDFFFSALLPIIFIVTFFDILTYFGILPWLIDKIGWVISKASRLPKLESFFSIQMMFLGNTEALAVIR
QQLTVLSNNRLLTFGLMSMSSISGSIIGSYLSM.VPATYVFTAIPLNCLNALIIANLLNPVHVPEDEDIIYTPPKEEK..
KDFFSTISNSMLVGMNMVIVILAMVIGYVALTSAVNGILGVFVH....G.LTNQTIFAYLFSPFAFLLGLP..VHDAMYV
AQLMGMKLATNEFVAMLDLKNNLKSLP...............PHTVAVATTFLTSFANFSTVGMIYGTYNSILDGEKSTV
IGRNVWKLLVSGIAVSLLSAAIVG.LF