HMM Seed Alignment: TIGR00794
Download Alignment>gi|2746086|gb|AAC39315/48-773
LAFQSVGIIYGDIGTSPLYVYSSTFPD..GIKNRDD...LLGVLSLILYTLIIIPMLKYVFIVLYANDN.GDGGTFALYS
LISRYAKIRLIPDQQA..........EDAAVSNYHIEAPNSQLKRAQWLKQKLESS.KAAK.IVLFTLTIPSMVIGDGTL
TPAISVLSAVSGIREKAPSLTQTQVVLISVAILFMLFSVQRFGTDKVGYTFAPVISVWFLLIAGIGMYNLVVHDIGVLRA
FNPMYIVQYFIRNGKSGWVSLGGIILCVTGTEGMFADLGHFNIRAVQLSFNGILFPSVALCYIGQAAYLRKFPDNVANTF
YRSIP....APMFWPTFIVAILAAIIASQAMLSGAFAILSKALSLGCMPRVRVIHTSHKYEGQVYIPEVNFLMGLANIVV
TVAFRTTTSIGHAYGICVVTTFAITTHLMTVVMLLIWKKHVMFIMLFYVVFGSIELIYLSSIMSKFIEGGYLPICFALVV
MSLMAAWHYVQVRRYWYELDHIVPISEMTM..................................................
LLEKNE...VRRIPGVGLLYT.......ELVQGIPPVFPRLIQKIPSVHSIFIFMSIKHLPISRVVPTERFIFRQVGPRE
HRMFRCVARYGYSDTLEEPKEFAAFLVDRLKMFIQEESAFALVQDQEESGGAGDVSDALARPRRSTVHSEEAVQGQARVS
S..HSASGRMSFHTSQAVEEEKQLIDREVERGMVYLMGEANVTAEAKSSILKKIVVNHVYTFLRKNLTEGHKVLAIP...
..KDQLLKVGITYEI
>gi|2654088|gb|AAB87687/28-712
LAYQSLGVIYGDLSTSPLYVYKTTFSG..KLSLHEDDEEIFGVFSFIFWTFTLIALFKYVFIVLSADDN.GEGGTFALYS
LLCRYAKLSILPNHQE..........MDEKLSTYATGSPG.ETRQSAAVKSFFEKHPKSQKCLLLFVLLGTCMAIGDSVL
TPTISVLSAVSGVKLKIPNLHENYVVIIACIILVAIFSVQRYGTHRVAFIFAPISTAWLLSISSIGVYNTIKWNPRIVSA
LSPVYMYKFLRSTGVEGWVSLGGVVLSITGVETMFADLGHFSSLSIKVAFSFFVYPCLILAYMGEAAFLSKHHEDIQQSF
YKAIP....EPVFWPVFIVATFAAVVGSQAVISATFSIISQCCALDCFPRVKIIHTSSKIHGQIYIPEVNWMLMCLCLAV
TIGLRDTNMMGHAYGLAVTSVMLVTTCLMTLVMTIVWKQRIITVLAFVVFFGSIELLYFSSCVYKVPEGGWIPILLSLTF
MAVMYIWNYGTTKKHEFDVENKVSMDRIVS..................................................
LGPSIG...MVRVPGIGLVYS.......NLVTGVPAVFGHFVTNLPAFHKILVFVCVKSVQVPYVGEEERFVISRVGPKE
YGMFRSVVRYGYRDVPREMYDFESRLVSAIVEFVETEPG..L.EEEEMS.......S..VRRKK.....EECME......
.................IMEAK.......EAGVAYILGHSYAKAKQSSSVLKKLAVNVVFAFMSTNCRGTDVVLNVP...
..HTSLLEVGMVYYV
>gi|3724139|emb|CAA08814/130-862
LAYQSVGVIYGDIGTSPLYVFSSTFT...APPTHRD...LLQVLSVVIWSITILVTFKYIFVILHADNE.GEGGTFSCYS
LLTRFANITERDPREE..........VTVRMERHLTNDLK...PPTRSLRAKLEGSRFTHVLLKIIGVLAVSMVMSDGVL
TPAQSVLGAVQGLSVVKPDISKSTVTGTTCGILVLLFLIQPLGTSKIATTFAPIVIVWLGLNFSFGIYNLVTFDWTVLKA
FSPYFAFQFFIEHKTRAWKMLGGVLLSFTGVEALFADLGAFSLHAIQLSWMCYTYPCLLLAYIGQAAYISHHPDAYTNPF
FNAAP....PGTLYPSLVIAILAAIVASQAMITATFQLISQIMKLSYCPQVKVVHTSQTFHGQIYVPFVNWLLMLGAILV
TAVYGDTVKLGNAYGVCVMFVTFFDTCMVTLVSLIVWKLSPFLVFVPWLVFASVDGLYLSAALIKVPEGAWFTLTLSGIL
TSLFLLWRFGKENQWRAEAEDRFKPSHLIVKDKNE........................................GGRLR
LQPVWGGDPLSSLRGFGIFFD.......KTGVMTPAVFTHYVTKFVAIPEVAVFFHLHPVEAPTVLPEERYAVSHFTAVP
.GCYRLVIKHGFMDQVISP.DLAALIYEQIRRFVVRQATERMRALEKLR..TGEDTDCEGEGEQEAAKGETSHRTESSGA
SGPDGVLLPVELRDEEAAAELAR.LDRAYASKILYVVGKEQMRIKTGAPIARRFMLS.VFLWIRDNTRAKIANLQLA...
..TDRLVEVGFVKEI
>SP|P30016|KUP_ECOLI/12-622
ITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERD..AVFGFLSLIFWLLIFVVSIKYLTFVMRADNA.GEGGILTLMS
LAGR..NTSAR..................................TTSM.............LVIMGLIGGSFFYGEVVI
TPAISVMSAIEGLEIVAPQL.DTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIA.NPEVLHA
LNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPF
FLLAP....DWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIV
IVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVM
FIVMTTWKSERFRLLRRMHEHGNSLEAMIAS.................................................
LEKSPP....VRVPGTAVYMS.......RAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTF
...WRVVASYGWRETPN.............VEEVFHRCG.....LEGLS............CRM................
..................METS............FFMSHESLILGKR.PWYLRLRGK.LYLLLQRNALRAPDQFEIP...
..PNRVIELGTQVEI
>PIR|S56141|S56141/2-762
LGFSSLGAIYGDIGTSPLYVLNSIKYPN.SSPTEED...IYGAISIIFYLFTFIVIFKYILIVLFLGTNDGEGGQVAIYA
KIARSLKIGPKGVHIPGSPEKTDLELLARAETSSSFKSSNLFLNKASGFKTNPKLIKFISKFILFGCFFGCSLVMSDGLL
TPTTSVLSAIAGIQIANPSF..NDVLAVSEVVLIVLFLIQQFGSNKISFTFAPIIFLWLIGLIISGIYNIVKFHPAVFKS
LSPYYAIQLLKHSG.ID..VFSGAMLSITGTEAMFADVGHFGRLPIQLTLTLFVYPALIICYLGQGAYIIKHPEALSNPF
FYSIPGGLNSWIYWVMFVLATLSTIIASQALILGVFSITSQLINLDCFPNFKIIHVSKKYAGKVYIPAINWLLMIGVCAT
TAGFKNSNNVTAAYGLGITLDFLVTSSLIMVCMTYVYNWNILIPITYALIFLPLEVIMVISNLKKITHGAWFPLMMSGIF
MMFLSFWRWARSRKVNQDFKTRIRIGDLYPELKKQPPQSETVDLNDRGRPMSIVNSSNEELVEYGVTLPKILKTNNNQLK
VQSKFGLMNLKKYDGIAIMYNDSSVHTLNSPNTVPQVYGKLVSSFSSIPSVFIFCSIRVLSIPTVPNDERVLIGSMKIPG
..HYRCIIRYGFMEEILIDKELNNHILNSIPDINELAIKFNLNNKCILT..........KPCTIP...ILHIFEN.....
..................NLIR.......SHDYSSEEHETKNPLVKCKRFIRKILINHIFSPIYSDFQSNGKFLKISDED
EESEKKMFLGGVVRI