HMM Seed Alignment: TIGR00788
Download Alignment>gi|3033544/1-449
MPDSTLSTVAKPTWQQRLLF.....GQEPSPELAAILLVYFVQGIL.GLSRLAVSFFLKDDLGLSPAQVSALTGIAALPW
MIKPAFGLLSDGFPLGGYRRRPYLIAAGLLG...STAWLGLGTVVHSPAMATLAIALSSLSVALSDVIVDSLVVERARQE
SRSESGSLQSLTWAVSALGGLVTAYLSGFLLQLFETRTLFLITATFPLIV..CLVAGWIAE...................
...................................................VPQT.........................
..IQPG.LALIREQVGQIGQALR.................Q.RQIWMPTLFLFL....WQVTPSADSAFFFFSTNELHFE
PEFLGRVRLVTN..LASLLGVWIFQRFLRGVP...IRRIFGWMIVVTTLLGLTSLILVTHLNRSWGISD.QWFSLGDSLI
LTVAGQLSFMPVLILAARLCPSGIEATLFALLMSVLNLAHFGSVELGALLTHWLG........VTESQFDRLWLLVLLTN
LSSLLPLPLLG.LLP....AEEAETVPSDAIASAAPEPL
>gi|4263714|gb|AAD15400/1-429
.....................................MVYFVQGVL.GLARLAVSFYLKDDLHLDPAETAVITGLSSLPW
LVKPLYGFISDSVPLFGYRRRSYLVLSGLLG...AFSWSLMAGFVDSKYSAAFCILLGSLSVAFSDVVVDSMVVERARGE
SQSVSGSLQSLCWGSSAFGGIVSSYFSGSLVESYGVRFVFGVTALLPLIT..SAVAVLVNEQR.................
..............................................V...VRPASG.Q.....KE.......N..ITL..
..LSPGFLQTSKQNMIQLWGAIK.................Q.PNVFLPTLFIFL....WQATPHSDSAMFYFTTNKLGFT
PEFLGRVKLVTS..IASLLGVGLYNGFLKTVP...LRKIFLVTTIFGTGLGMTQVILVSGFNRQLGISD.EWFAIGDSLI
LTVLAQASFMPVLVLAARLCPEGMEATLFATLMSISNGGSVLGGLMGAGLTQAFG........ITRDSFGNLSTLIILCN
LSSLLPLPLLG.LLP....RDSPDTLTKDDADVEMKSN.
>gi|703123/17-611
HPVSARVLRAAPFLGYIPVFSIAIRSFHPKVVVAICMQRLFEKGLANGLMRLSMQPMLTGRYGLTGAMYQRLSTLYTLGW
ALNAFITVMADTFALFGYTKRWYCVVSAVGGGAFALLYGLLPAKESSAKPAAAFMFLAALFMSNIDVFAVALYSERIR.Q
RPAAGPALVSWMWGTALIGIMISSVIQGPLSDNRLTHLGVYITAAILLLSGLLFVFNLFEERRNRAARLEDAMIEFLQNT
KSASTDSTAGSLPSPHKPDGHLTIDSRVEEEGDDDDHDEQKAAAMDAQGFVRPRMDTYLCGAVEMNRDVLLRNWRMALFC
LILTLGVIANALVNILGTRWDIMYVCIVVAVVVCVSSFFTLPLAIAKAVVFMYFNEILYLNLPGVLNTFYVAKPLCLPGG
PHFSYTFYNVMNGILGSIAGIGGTMVFTHLFPHHSYRFVMGLSAVLLPAASMFDLLILKRWNLVIGIPDHAMYILGDAII
YEVCDMLLNMPMMMLMCRIAPRGSESMVFALLASIYHLGTSTSSAIGYLLMETIWPVV...TQGTCDYSNAPWLVITGHI
VAPVFILPLAYVLLPSARISDHIDHTGRKVMEAALPETR
>gi|409754/17-611
HPVSARVLRAAPFLGCIPVFSIAIRSFHPKVVVAICMQRLFEKGLANGLMRLSMQPMLTGRYGLTGAMYQRLSTLYTLGW
ALNAFITVMADTFALFGYTKRWYCVVSAVGGGAFALLYGLLPAKESSAKPAAAFMFLAALFMSNIDVFAVALYSERIR.Q
RPAAGPALVSWMWGTALIGIMISSVIQGPLSDNRLTHLGVYITAAILLLSGLLFVFNLFEERRNRAARLEDAMIEFLQNT
KSASTDSTAGSLPSPHKPDGHLTIDSRVEEEGDDDDHDEQKAAAMDAQGFVRPRMDTYLCGAVEMNRDVLLRNWRMALFC
LILTLGVIANALVNILGTRWDIMYVCIVVAVVVCVSSFFTLPLAIAKAVVFMYFNEILYLNLPGVLNTFYVAKPLCLPGG
PHFSYTFYNVMNGILGSIAGIGGTMVFTHLFPHHSYRFVMGLSAVLLPAASMFDLLILKRWNLVIGIPDHAMYILGDAII
YEVCDMLLNMPMMMLMCRIAPRGSESMVFALLASIYHLGTSTSSAIGYLLMETIWPVV...TQGTCDYSNAPWLVITGHI
VAPVFILPLAYVLLPSARISDHIDHTGRKVMEAALPETR
>gi|3377706/23-615
HPVSARLLRAAPFLGYIPVFSIAIRSFHPNVVLAIFMQRLFEKGLADGLMRLSIQPMLTGRYGLTGAMYQRLSTLYTLGW
ALNAFITVMADTFALFGYTKRWYCVVSAVGGSVFALLYGLLPAKELSAKPAAAFMFLAALFMSNIDVFAVALYSEQIR.R
RPAAGPALVSWMWGTALMGMMISSVIQGPLSDNGLTHFGVYITAGILLLSGLLFVFNLFGERPNRAARLEDAMVEFLQHI
KSVNGDSTAGSPPSPSKPDGHLTIDSRAEE.GEDDD.DEQDTTATDAQGFVRPRMDTYLCGAVEMNRDAILRNWRMALFC
LILTLGVIANALVNILGTQWDIMYACIVVAVVVCVSSFFTLPLAIAKAVVFMYFNSIFYLNLPGVLNTFYVATPSCLPGG
PHFSYTFYNAINGILGNIAGIGGTMLFTHLFPNYSYRLVMGLSAVLLPAASMFDVVILKRWNLAIGIPDHAMYIFGDAII
YEVCNMLLNMPMMMLMCRIAPRGSESMVFALLASIYHLGTSTSSAIGYLLMETIWPVV...TQGTCDYSNAPWLVITGHI
VTPVFIFPLAYVLLPSVRISDYIDHTGRKVMEVALPETR
>GP|311494|emb|CAA51968.1/96-671
HPDARALFQQLPCVWRIPVFGTAVEAFGPRCVLALGLSELFGKGIAHDMIRTTLFPMFTYTFGADAKLYQRMGGMSSLGY
AMKPFAAMFSDLFALFGYTKRWYLALSCVVGSTVAIVYGSLPGELSYVPVAGILVFVMAFTKGILDILTQGHYSRLIR.R
VPLAGPSLVSWVWWCVLTGSLIASSIVGPLTDKKLQRVAVFISAGIQFVPTIFFIMNWYGERRNREERAYDLTVLRKEQL
ER...EADAAGLQGSEETSGSLDNPSD.................AEEVAEAGTRILTCCCGAFEVNREVFARNKKVVFYC
MLLTLGAMGMVLVTVLGTRLQLLITSVLASFTLCGLGFVALPLVIAKANMFTFISRVAYIQLPGAIDNVFMATPDCFPGG
PNFSYFYYSTVGNMIGAVGGVIGVTLFRYVFSKRSYRLTFIVTTLIEIVSSIFDIIIVERWNRPY.VSDHVVFVLGDQII
HQVCYMMHFMPTVILISRLCPSGYESAVYSVLAGCAHFGRSVSNTLGWLLMEYVWNVQSDIKVGPCDFSNVKWLLLVGHF
ATPLISIPLVFLLIPAARLCDVLDENGK.AITKEAEDVR
>gi|2494120/1-407
...............................................MGEARPRRATTFACLSIRRRRNNNGVSEFEETA
RFEQVGGKGISVLCGLGYWVQGSRCFPWLALN..FHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSGR..
.........RVPYIAIGAGGVLGNLLGGYLLLTTPPKISFLVFSALLSLQ..LVVSLSSKEES.................
.................................................FGLPRIAET......................
....SSVLESVKKQISNLKEAIQ.................A.DEISQPLIWAVVS...IAMVPLLSGSVFCYQTQVLNLD
PSVIGMSKVIGQ..LMLLCLTVVYDRYLKTLP...MRPLIHIIQLLYGLSILLDYILVKQINLGFGISN.EVYVLCFSSL
AEILAQFKILPFAVRLASMCPQGCEGSVTSFLASTLCLSQIVSAFLGVGLANLIG........ITSSNYSNLSSGILIQS
LAALAPLCFMH.LVP..MSEPVIEKEGKRGISKRSRRNR
>gi|2459411/1-389
................................................MVAKPLYGVLSDVLYIGGARR...VPYISVGV
LLQGLAWGSLAIFPG......AREVLPSLMA...FILLSNLG..ASITEVSQ.D..A.LVAE..YGLRYQINGLQS....
..........YALMASAVGGILGNLLGGYCLLKTPPRILFLAFTALLSLQ..LIVSLSSKEES.................
.................................................VNLPRIGEVT....P................
..EISSVLGIVKKQFLDLKGIVQ.................V.DEISQPLIWIVSS...IALVPLLSGSVFCYQTQVLNLD
PSVIGMSKVIGQ..LMLLCLTVVYDRYWKKLP...MRALIHIVQLLYAFSLLFDYILVKQINLAFGISN.TAFVLCFSSV
AEILAQFKILPFSVLLANMCPGGCEGSITSFLASTLCLSSVVSGFTGVGMANMIG........ITSKNYSNLPAGILIQS
LAALVPLWFIH.YVP..MLEPGFEREGKRAMSKKSRRNR