HMM Seed Alignment: TIGR00596
Download Alignment>GP|1524411|gb|AAB07689.1/86-896
RYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFC
HVERVMRNLFVRKLYLWPRFHVAVNSFL.....EQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPS.LEVE
DLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLE..SLRATEKAFGQ....NS
GWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEIKEGEETKKELVLESNPKWEALTEVL.KEIEAEN..KESEAL
GGPGQVLICASDDRTCSQLRDYITL.....................GAEAFLL....RLYRKTFEKDSK..AEEVWMK.F
RKEDSSKR..IRKSHKRPKDPQNKER.ASTKERT.LKKKKRKLT..LTQMVGKPEELEEE.....GD.VEEGYR.REISS
SPESCPEEIKHEEFDVNLSS.DAAF..GILK....EPLTII.HP...LLG..CSD.PYA.............LTR..VLH
EVEPRYVVLYDAELTFVRQLEIYRAS.RPGKPL...RVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP....
.EEREGRDE.TNLDLVRGTAS.....ADVSTDTRKAGGQE..QNGTQQSIVVDMREFRSELPSLIHRRDIDIEPVTLEVG
DYILTPEMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTS....RGALFQEISS.........
.NDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQSKPQPDAATALAIT.....ADSETLPESE.......KYNPGP
QDF..LLKMPGVNAKNCRSLMHH.VKNIAELAALSQDELTSILGNAANAKQLYDFIHTSFAE
>SP|P06777|RAD1_YEAST/203-1066
RRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNESFILEIYRSKNTWGFIKAFSEAPETFVMEFS
PLRTKMKELRLKNVLLWPRFRVEVSSCLNATNKTSHN.KVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPE.LALD
WWNMENVLDINFIRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEIQL.SLDANKPSVSRK.YSES
PWLLVDEAQLVISYAKKRIFY........................KNEYTLEENPKWEQLIHIL.HDISHE...RMTNHL
QGP..TLVACSDNLTCLELAKVLNASNKK................RGVRQVLLN.KLKWYRKQREETKKL.VKEVQSQDT
FPENATLN..VSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGSGDDLDDG...QEENA
ANDSKIFEIQEQENEILIDDGDAEFDNGELEYVGDLPQHITTHFNKDLWAEHCNEYEYVDRQDEILISTFKSLNDNCSLQ
EMMPSYIIMFEPDISFIRQIEVYKAIVKDLQP....KVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENANLSHHF...
.ETNEDLSHYKNLAERKLKLS.....KLRKSNTRNAGGQQGFHNLTQDVVIVDTREFNASLPGLLYRYGIRVIPCMLTVG
DYVITPDICLERKSISDLIGSLQNNRLANQCKKMLKYYAYPTLLIEFDEGQSFSLEPFSERRNYKNKDISTVHPISSKLS
QDEIQLKLAKLVLRFPTLKIIWSSSPLQTVNIILELKLGREQPDPSNAVILGTNKVRSDFNSTAKGL.......KDGDNE
SKFKRLLNVPGVSKIDYFNLRKK.IKSFNKLQKLSWNEINELINDEDLTDRIYYFLRTEKEE
>SP|Q24087|MEI9_DROME/79-880
RERVYLEGGLQFISTRILVVDLLKQRIPIELISGIIVLRAHTIIESCQEAFALRLFRQKNKTGFVKAFSSSPEAFTIGYS
HVERTMRNLFVKHLYIWPRFHESVRTVL.....QPWKIQSIEMHVPISQNITSIQSHILEIMNFLVQEIKRINRT.VDME
AVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRTLMISTMYHDAVSAYAFMK..RYRSTEYALSN.....S
GWTLLDAAEQIFKLSRQRVFN..................G.....QQEFEPEPCPKWQTLTDLLTKEIPGDM..RRSRRS
EQQPKVLILCQDARTCHQLKQYLTQ.....................GGPRFLLQ.QALQHEVPVGKLSDNYAKESQTRSA
PPKNVSS....NKELRREEVSGSQPPLAGMDELA..QLLSESET..EGQHFEESYMLTMT......QPVEVGPAAIDIKP
DPDVSIFETIPELEQFDVTAALASVP........HQPYICL.QT...FKTE..REGSMA.............LEH..MLE
QLQPHYVVMYNMNVTPIRQLEVFEAR.RRLPPADRMKVYFLIHARTVEEQAYLTSLRREKAAFEFIIDTKSKMVIP....
.KYQDGKTDEAFLLLKTYDDEP....TDENAKSRQAGGQAPQATKETPKVIVDMREFRSDLPCLIHKRGLEVLPLTITIG
DYILTPDICVERKSISDLIGSLNSGRLYNQCVQMQRHYAKPILLIEFDQNKPFHLQG....KFMLSQQTSMAN.......
.RDIVQKLQLLTLHFPKLRLIWSPSPYATAQLFEELKLGKPEPDPQTAAALG.....SDEPMAGEQL.......HFNSGI
YDF..LLRLPGVHTRNIHGLLRK.GGSLRQLLLRSQKELEELLQSQESAKLLYDILHVAHLP
>SP|P36617|RA16_SCHPO/90-890
REKSYLEGGIFAITSRILVMDLLTKIIPTEKITGIVLLHADRVVSTGTVAFIMRLYRETNKTGFIKAFSDDPEQFLMGIN
ALSHCLRCLFLRHVFIYPRFHVVVAESL.....EKSPANVVELNVNLSDSQKTIQSCLLTCIESTMRELRRLNSAYLDME
DWNIESALHRSFDVIVRRQLDSVWHRVSPKTKQLVGDLSTLKFLLSALVCYDCVSFLKLLDTLVLSVNVSSYPSN.AQPS
PWLMLDAANKMIRVARDRVYK...............E..SEGPNMDAIPILEEQPKWSVLQDVL.NEVCHETMLADTDAE
TSNNSIMIMCADERTCLQLRDYLSTVTYDN...............KDSLKNMNS.KLVDYFQWREQYRKM.SKSIKKPEP
SKEREAS....NTTSRKGVPPSKRRRVRGGNNAT..SRTTSDNTD.ANDSFSRDLRLEKIL....LSHLSKR...YEPEV
GNDA..FEVIDDFNSIYIYS...........................YNGE..RD.ELV...................LN
NLRPRYVIMFDSDPNFIRRVEVYKAT.YPKRSL...RVYFMYYGGSIEEQKYLFSVRREKDSFSRLIKERSNMAIVLTAD
SERFESQES.KFLRNVNTRIAGGGQLSITNEKPRVRSLYLMFICIKTLKVIVDLREFRSSLPSILHGNNFSVIPCQLLVG
DYILSPKICVERKSIRDLIQSLSNGRLYSQCEAMTEYYEIPVLLIEFEQHQSFTSPP....FSDLSSEIGK.........
.NDVQSKLVLLTLSFPNLRIVWSSSAYVTSIIFQDLKAMEQEPDPASAASIG......LEAGQDSTN.......TYNQAP
LDL..LMGLPYITMKNYRNVFYGGVKDIQEASETSERKWSELIG.PEAGRRLYSFFRKQLKD
>GP|3219304|gnl|PID|d1029787|AB/36-888
REKMYAQGGIFSITSRILVVDLLTNLLNPETITGMLVLHADRIVATSLEAFIFRIYRQKNKVGFLKAFSDNPDPFTVGFS
PLATMMRNMFLRKASLWPRFHVQVAQSLE....GKKKAEVIELEVPMTDSMREIQTAIMECVEISIHELKKENTG.LEME
DWNLDSALTRNFDRMVRRQLEPNWHRVSWKTKQIAGDLTVLRGMLQSLLALDAVSFLQQLDT.IHAAHKPAPGTTRQTES
PWLFSDAAQTIFETARQRVYS............SKQKAGPNSTIESLKPVLEEQPKWAVLADVL.EEIDRDLYFEPAVRD
DSNGTILVMCADTDTCRQLRDYLQTMHIRPRTAKKVEEVYDPEEDRPSGAFLMRRKLRNYLNWKREFAQVNATLFSENQK
ALSGAVDPRLPQARGRGGAPANKRRRVRGGGGGVGSNPSRHENGS.IVQHFEKPNEVADL.....MSEIQITEDDAGGQA
AEEIITFATADPLEDMDDYY...QLYD........MQDLVVIHA...YEGD..QD.EHV...................LE
EVKPKYIIMYEPDASFIRRVEVYRSS.HNDRNV...RVYFLYYGGSVEEQRYLSSVRREKDAFTKLIRERASMSIVMTTD
SHGVEDPES.AFLRTINTRIA............G..GGKLAKATAQPPRVVVDVREFRSSLPSLLHGRSMVIVPCMLTVG
DYILSPNICVERKSVSDLISSFKDGRLYAQCETMFQHYRNPMLLIEFDQNKSFTLEP....FADLSGSLRSVNPENAG.A
QRLAVQKSCLLTLAFPKLRIIWSSSPYETAEIFERLKALEEEPDPVAAVRAGLGEGESPEDGVNEGKGAVNGGSTFNMEA
QEM..LGKVPGVTPKNIRNITAE.AENVREVANMEVEELGRLVG.REAAGKIVEFFKKDVLE