HMM Seed Alignment: TIGR00595
Download Alignment>OMNI|NTL01EC03841/221-730
LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG..LNDSERLSAWLKAKNGEAA
IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG.WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR....
LLRLTRRAGNARPAIQHVLDLKGQKVQ.....................................................
..AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH....HLRCHHCDSQRPVPR
Q.CPSCGSTH.LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT
LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP
WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA.L
INTIPDSRKVKWVLDVDPI
>SP|P05445|PRIA_RHORU/250-808
LLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQ..MGAAARRRAWRAVALGRAP
VVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEG.VPYNARDMAVVRARLGGFPAVLASATPSLETIENARQGRYR....
HLVLPRRHGGAEMPEITLLDLRRAPPQKWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPA
RLGWLSPPLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDG....RLRCHHCGYQQPIPE
T.CPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAALATRIANHDIDLIIGTQIMAKGHHFPLIT
LVGVVDGDLGLTGGDLRASERTHQLLHQVAGRAGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPP
FGRLVALVISGEDSARVQAVAAALGRAAP....MGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQPVVRHWLS..
LVSIPP..GVKVQVDVDPI
>SP|P94461|PRIA_BACSU/292-802
LLHGVTGSGKTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSG..LSTGEKYDEWRKIHRKEVR
LVVGARSAIFAPFENLGMIIIDEEHESSYKQEEM.PRYHAKEVAIKRAEHHSCPVVLGSATPTLESYARAQKGVYE....
LLSLKHRVNHRVMPEVSLVDMREELRNGNR..................................................
..SMFSVELMEKLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQ....RLKCHYCGHEEPVPH
T.CPECASEH.IRFFGTGTQRVEEELTKVLPSARVIRMDVDTTSRKGAHEKLLSAFGEGKADILLGTQMIAKGLDFPNVT
LVGVLSADTTLHIPDFRSAEKTFQLLTQVSGRAGRHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRREQSYPP
YYYLALVTVSHEEVAKAAVTAEKIAHFLK..ANCGADTKILGPSASPIARIKDRYRYQCVIKYKQETQLSALLKKILEHY
KREIEQK.HVMISIDMNPY
>SP|P74397|PRIA_SYNY3/314-828
LLHGVTGSGKTEVYLQICGDRLGKGQSVLVLVPEIGLTPQLTDRFRARFGNKVAVYHSG..LSSGEKYDTWRQTLLGHEQ
IVIGTRSAIFTPLPNLGLIILDEEHDSSFKQTQLTPNYHARTVAQRRAELEQCPLILGSATPSLESWHTVHRHQNDPQRH
YLELPERVQSRPLPPVQIVDMRAELKQGNR..................................................
..SIFSRALQTALGELKAKQQQGILFINRRGHSTFVSCRSCGYVLECPNCDVSLSYHYVQGNGQPLLRCHYCNHAEIQPK
V.CPECSSPY.LKFFGSGTQKVTEALTQEFPDLRWIRFDSDTTRRKGAHRALLDQFQRGEADLLVGTQMLTKGLDLAQIT
LVGVVAADSLLNFADYRSAERGFQTLTQVSGRAGRGEEPGQVIIQTYTPRHPVIQAVKTHNYHGFIAQELPQREMLNYPP
YGKLILLRCLGTNEREVEKTIQAIAVLCE..QLLPKTVEILGPAPASILRIAQRYRWQLLVKYPSFIKVILPLER.....
IKQICPS.SVYLDIDVDPL
>SP|Q45032|PRIA_BORBU/155-657
YLFGIPGSGKTEIFIKLCEYYLALEQQVLFLIPEISLGYQIIKRIKYALNMHHKIYEYNSKVPNSDKNLIWNKVKNGESL
VVIGIKSVLMLPFTKLKLIIMDEEHETTYKSENI.PRFHSRHISFFLQKKFNAKFVMGSATPSLEAYHAMKNNQIK....
KIIMQNKFSQSKIEDIKIINMKKEP.......................................................
..STISSELLYSIQKSLNEKRQSLIFINKRGYLKNLECNECGHIICCPNCSFGLIYHKKEN....KLLCHYCSYKTKTAS
H.CPQCESKD.IKYKTYGIQLVEKELKKFLPNAKIARIDSDITKIEN..IDSINKFENKEIDILIGTQIIAKGFNFENIK
TLGIINADIGMGLPDFRSGERIFTTLSQIMGRAARFKDDNIIIIQTKNPNYYAIKYAYKNQYEQFYEEELDIRKKLNYPP
FNKIIRIIFRSKNEESAKQKCWEFFEKSK..EFLQEEIEHLGPSEAIMKKISKNYRYNIIYLSKSYSLLEKLVNKT...K
EKVKMTS.TVYIEIDYYPI
>SP|O83258|PRIA_TREPA/153-654
YVHGVTGSGKTEVFLRAAEAVLARGKSVIYLVPEIALTHQVLQEVYVRFGSQAAVLHSA..LSGSQRLGEWRRIQCMRHC
VVIGARSAIFAPLKRLGLVIMDEEHDSSYKSAHV.PRYHARQVAMYRCADANCPFVMGSATPSVEAWYAMLRGAVR....
RLPLTARVAGGAPPRVEVVDVSKEA.......................................................
..LLLSTRLVDEIRKTKEAGYQSMLFLNRRGFSYSFQCRSCGYTLCCTQCAVPLTWHKRVG....AMQCHYCGRQEAPPE
S.CPCCHSFD.TRYGGVGTEYIEEAVQALFPEYRIARVDTDALRSGH.VQQTMEQFRAGKIDVLLGTQMIAKGFNFPTLR
LVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQHGDCESFYAQELAQREALCFPP
FVRLIRFVFRSKTRRKAKDAAYAAHALLT..AQMPLGADVLGPAACVVAQVAGSYRMQILLRAPSFPVVQQVARS....F
LDEFRAPAGVYVESDVDPV
>GP|3329242|AE001350/238-749
LLFGVTGSGKTEVYLQVIRKARALGKSVILLVPEVALTIQTLSFFKMHFGSEVGVLHYK..LSDSERTQTWYKASRGLIN
IIIGPRSAIFCPIQNLGLIIVDEEHDSAYKQSDLPPFYQARDVAVMRGKMTNATVILGSATPSLESYTNALSKKYT....
LSVLSKRASTSTPTKVFLIDMNLEMEKTRK..........................................K.......
..PFFSQTVIRSIEQRLEVGEQTIIFFNRRGFHTNVSCSSCKYTLKCPHCDMILTFHKTER....ILLCHLCNTRLSKPI
TSCPQCLGTMTLQYRGAGTEKIETLLREFFPTARTIRLDSDTTRFRGSHDALVKQFATGKADILIGTQMIAKGMHFPAVT
LSVVLSGDSGLYIPDFRAAEQVFQLITQVTGRSGRSHLPGEVLIQTFLPQNSTISHALAQDFPAFYKEEILGRKVCNYPP
FTRLIRCIFLGKCSDYTLKETQRVHTLIK..QNLDSQASLMEISPCGHFKVKDLFHYQFLIKTRNILVANKQIQEALA..
AAKLSS..KVRCIVDVDPV
>SP|O25149|PRIA_HELPY/129-616
LLFGDTGSGKTEIYMHAIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKENLGLWHSK..LSQNQKKQFLEKLYSQEIK
LVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS.PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALV....
.....R.LKGRYTPTQKNIIFEKTER......................................................
...FITPKLLEALQQVLDKNEQAIIFVPTRANFKTLLCQSCYKSVQCPFCSVNMSLHLKTN....KLMCHYCHFSSPIPK
I.CSACQSEV.LVGKRIGTMQVLKELESLLEGAKIAILDKDHTSTQKKLHNILNDFNAQKTNILIGTQMISKGHDYAKVS
LAVVLGIDNIIKSNSYRALEEGVSLLYQIAGRSAR.QISGQVFIQS...TETDLLENFLEDYEDFL.QYELQERCELYPP
FSRLCLLEFKHKNEEKAQQLSLKASQTLS...SCLEKGVTLSNFKAPIEKIASSYRYLILLRSKNPLSLIKSVHA.....
..FLKSAPSIPCSVNMDPV