HMM Seed Alignment: TIGR00546
Download Alignment>SP|P23930|LNT_ECOLI/63-458
WGFGLFGSGINWVYVSIATF........GGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTW..LRVAIAAPALW
QVTEFLRGWVLTG...FPWLQFGYSQI..DGPLKGLAPIMGVEAINFLLMMVSGLLALALVK..................
RNWRPLVVAVVLFALPFPLR.....YIQWFTPQPEKTIQVSMVQGDIPQSLK..WDEGQLLNTLKIYYNATAPLMG....
....K............SSLIIWPESAITDLEINQ.QP......................FLKALDGELRDKGSSLVTGI
VDARLNKQ...........NR.YDTYNTIITLGKG..APYSYESADRYNKNHLVPFGEFVP...LESILRPLAPFFDLP.
...MSSFSRGPYIQPPLSANGI.....ELTAAICYEIILGEQVRDN...FRPDTDYLLTISNDAWFGKSIGPWQHFQMAR
MRALELARPLLRSTNNGITAVIGPQGEI
>GP|17427537|emb|CAD14055.1/80-469
FGLGWFLSGIWWLYISMHVY........GDMPAWMAAAAVLLFSAYLALHPALAAWLWQRLARGRQLSGAASALVFGAAW
LVSEWLRGTEWTG...FPWLNGGYAHT..DGPLAGYAPLVGVYGVVAIAATLAGLLCAAAERRLH...............
..WLAGLAGVAVLAAGWPLH.....TIAWTQP.VGKPITVRLLQGNVPQDVK..FQQTGIDHSLALYTKMVTEQP.....
.................AQLVVTPETAFPILLQDMPQE......................IALAIRTYVDTTGSSVLFGA
ANADS.AV...............DYTNSAFGVGPWFK......GVYRYDKHHLVPFGEFIP...FGFH..WFVHMMNMP.
...LGDFRRGLPVQPPMPVAGQ.....RVAPNICYEDLFGEEIAASLRQAERPATMLANVTNLAWFGDTIALDQHLQISR
MRALESGRPMLRATNTGATAVVRPDGSV
>SP|Q52910|LNT2_RHIME/76-475
FGFGYFLGGLWWLGNALLVE........ADAFAWAIPLAVVGLPAVLGVFYALAVVIARCLWSDG....WGRIAALALGF
GIAEWLRGFVFTG...FPWNAIGYAAMP.MPLMMQSASVVNLSTINMLAVFVFAAPALIWTGKGART.............
GLAIAVALFTAHIAFGFYRLA......QPAPPSAAPQMAVRVVQPVIDQAKK..LDDRERASIFEDHLSLTAAPVQGG..
..GKR............PDIVVWPETSIPFILTDNPD.......................ALARIAEVLKDGQILVAGAV
RAEDA.GA...........GLPSRYYNSVYVIDDRG......QIIGAADKVHLVPFGEYLP...YEDLLTSWGLSSIAAS
..MPGGFSAARMRPVLTLPGGR.....RLYPMICYEAIFADEVDAN...ARL.ADVLLNVTNDAWFGDTPGPRQHFHQAQ
LRAVETGIPMIRAANTGISAVVDARGVL
>OMNI|NT01MC3640/76-470
FGVCHFALNFTWLVPALSRN........NDAPWVVGVLGVVGLAAVVALYPMLVAGGLALLRPRP....LLVPPLAATLW
VCSEWLRGHLFSG...FPWGQSGMAWMP.WQSLIQVADLGGIYLLSFLLLLTAAVVRLLFDPTLSAR.............
LRIGWLMGVALLLCGGHLYGQF.....KLLQPVPQTTYRVALVQGGVPQLEK..WQKPLHDEHLDRYLGLSLDAS.....
..GEK............LDLLVWPETALAYFLQAEPAR.......................QARIAGVVRSMAVPLLFGV
PHAVR.QQ...........PGVYRYYNGLGLMDGQG......RWVATYHKHHLVPFGEYLP...LRAWLPAWMDKITPG.
...KQDFAQGAGPLVLPSPAG......VLGPLLCYEVIFPAEVRQL...ANQGAALLVNATNDAWFGETAKP.QHLQMAR
LRTIENRLPLVRVANTGISASFDAYGRA
>OMNI|NTL01RC0495/54-442
FGFGHFLSGIYWISIGVSVY........IADFWWAIPFALFGLPIVLACFISASCTLS.FFAKNN....KYYQFIFCLCW
VLFEWVRSWIFTG...LPWNLIGYAFSF.SDILIQPLSIIGIYGLSFIVIYISTSAYPLFSKQFTQL.............
KILLASSVLVLTIIVIYGAVR......LSNNHTNFTDIKVRLVQPSIPQTEK..WNEEEFWHNLMLHINLSEN.......
..LEP............TDLIIWSEAALVVPDDIPQV.......................KSKLLKMLNSTNAILITGGI
SDNKK..Q...........GDEFELYSAMYALDKNN......HKLFEYHKSHLVPFGEYMP...LKKILPFKKLTHGLI.
.....DYKEGNGGLVYLEKYNL.....KIKPLICYESIFPDFVRTN...NEI.ADVIINITNDAWYGKSSGPYQHFHISR
SRAVENGLPMIRVANNGISAIVDPFGRT
>SP|O67000|LNT_AQUAE/50-423
FGFSAFFLSLLWIRIPLIDYG........NINPFIAYPALVLLVLFLSLYQFGLTYLLWRVFKFS.......FFAFPFLY
TLVEILRSHLPYGG..FPWLLLGVNLVD..IPVLRYTLNAGTVFLGSFVVLLISLFPLFNKKE.................
.KIFSLAIITPLLIYGFIKET........SYRVTHYGLKIALIQPFVPQDVK..LNRELFELKYGEIIELVKKAVEK...
....K............PDLVVLPESAFPFYLGELEEK.........................GKEILELSKKVPIITGF
IEIDEG................FKPYNTVVLLKDGR.......VIEKYRKIKLVPFGEYTP.....FPFKFFSKYVPYLS
...FEDYNRGNKVKCFQLNG......FSIGTPVCFEVAYPFFVKS.....FG.CEFIAVLTNDAWFRDSEGTFQHMKLAR
VRAIENEKFFLWVNNTGPSGIISPRGEV
>OMNI|HP0180/62-417
FALGFFVGALLFYWCALS............FRYSDFTYLLPLIIVLIALVYGVLFYLLLYFEN.............PYFR
LLSFLGSSFIHPFG..FDWLVPDSFFS........YS.VFRVDKLSLGLVFLACIFLSTKPLK.................
.KYRIIGVLLLLGALDFNGF.........KTSDLKKVGNIELVSTKTPQDLK..FDSSYLNDIENNILKEIKLAQSK...
....Q............KTLIVFPETAYPIALENSPFK..........................AKLEDLSDNIAILIGT
LRTQGYN.................LYNSSFLFSKES........VQIADKVILAPFGETMPLP..EFLQKPLEKLFFGES
...TYLYRNAPHFSDFTLDD......FTFRPLICYEGTSKPAYSNS...P...SKIFIVMSNNAWFSPSIEPTLQRTLLK
YYARRYDKIILHSANFSTSYILSPSLLG
>OMNI|NTL01CJ01039/76-425
FWIGFFVGILWFWWIGLS............SIYFNLNYLVPIIPIIIGFIYGLLFRLCYLLKF.............DFLR
LCGIFCISFIHPLG..FDWFNWGIFTV........YG.FFDPSYRGIICIFLIAYFIYEGYIS.................
.RYYKIAIVLILFFSGFQYN.........EKQAQTLNLNYKLINTNISQDQK..FLQENLKSNSDILIQDILQAINE...
....K............KELVILPETAFAFDLKNTKYE..........................LMLKELSYKITIITGA
FHVEKEH.................TYNSTYIFKKGN........VYILNKHFLVPFGEEIPF......FKDLTKKYFLKN
...IEEFSKGPIQSKYKLDN......QIITNAICYEATKEQNYQN........SQIIIALSNNAWFNNSSEYKLQQLLMK
FYASKYGVSVYHATNGKENIVILPKKLL
>OMNI|TP0417/56-487
CSYGLFVALVHACSSFWLKN.......FQGFALFTLGASTVGYFFYALPFGVAFACILRKQAPAR.......ACAFALVW
TLWEWVKSTGILA...YPWGTVPMTAHS.LSHLIQIADITGVWGLSFLIPLANACVAESLHFFIKK..............
RDSVPVFRLWLLTGCLYCLCSLYGAYRIATLGAPRTTLALAIVQQNADPWDTXSFEKNLTTAIHLTETALRTQTAPPLPT
TPYRKEKTLTHASARAPVDMVVWSESSLRYPYEQYRHVYN.................ALPAARPFSAFLRTLGAPLLVGT
PLRLSGNS............TKGGYANAVALLRPDG......HVAQVYGKMQMVPFAEFIP...WGHMTSVQRLAQMLAG
..FSESWTPGPGPRLFHVPCAAGG.SVRFATPICYEDAFPSLCAAL..HTQG.SELLINLTNDSWSKTASAEWQHYVVSL
FRAIELRTTLVRSTNSGYTVVIGPEGKT
>OMNI|BB0237/60-454
YFIIANSLQNFWLG...............FFHAFGWITFIGVIIGYIPYSLTLGYFLYYSLKSFKN.....KTMSITMLF
TFYDYSRSIGFLA...YPWGLAAFTVNN.FNNLIQIADIFGVFFVSFAVYFLNSGIADFLIHKN...............K
TNLLNIAFPTLLITASFTYGMIKKIELKNLLAKEIDSLNIAAIQLNTDPWLPG.NDKKGIRDSIEITEQALKENPK....
.................IEFVIWSEGVLTYPFSKEDQHFKSS.................DLHNELKNFIKEHKIPFAIGA
PSNLDKAIG..............IQQNSIYMVEPN......LNITNIYSKIFLVPFAEKIPFYEYKFVRNFFLKNFRILG
......QIEGNKIEILKLKK......FKFAPLICYDDAFPELSRFY...KTQGANILVNFSNDSWSKTNSAEWQHFVVAK
FRSIENGIKTIRATNSGITATINEYGET
>OMNI|TM0573/69-442
YFFTHVLISFFWVLPTLTEN....VPLVFGRYPSWLGIVVFVLMGIIEAVPFLGFGFLSYFAPQS...IVLKTLYLASVY
TIFEYLRGVGELG...FTGGRISEALYS.HTGLIQIVSITGTLGLVFLIVSLNVLFYEFLRRR.................
KGLLIFPVIFFVYLLNSSVVH.......LLPVPERGSFKVVALQPNVPTSLK...YSVSSGEMLELLESMTKDFHG....
..................SIVITPEAFFLEDVRYS.............................QKLRELSEENTFVIGF
PADNQ.....................NSVFVLEGGR.......FRKVYSKVKLFPFVEKLP...YPRVFGVFSFLKGLS.
.....YYEPGRNFSVFNVGESP.....PLSVQICFESYFPEVSRAF...VKNGSELLIVVTNDGWFHYKAALLNHFVQGV
FRAVETRRQFLQVANTGITGLVDEYGRI
>SP|O84539|LNT_CHLTR/61-475
WTWTVEGAHFSWMLEDLYVG.........TSIYFVWGILLSYLATLFASFSCLVVWCCRKQYRG.......ALVWLPGVW
VAIEAIRYYGLLSG..VSFDFIGWPLTAT.AYGRQFGSFFGWAGQSFLVIAANICCFAVCLLKHS..............F
SKGLWLTLCAFPYLLGGAHYEY....LKKHFS.DSEVLRVAIVQPGYSPH.M..HAGRTASAIWRGLVSLCQTIQTPV..
..................DVIVFPEVSVPFGLHRQAYTLHENQPVLESLLPNKSWGEFFTNLDWIQAIAERYQCTVIMGM
ERWENKGG.............ILHLYNAAECVSREG......EITS.YDKRILVPGGEYIPGGKIGFSLCQTFFPEFALP
..FQRLP..GEFSGVVNITER.....IKAGISICYEETFGYAIRPY...KRQQADILVNLTNDGWYPRSRLPLVHFYHGM
LRNQELGIPCIRACRTGVSAAVDSLGRI
>OMNI|CT1498/64-481
FRKSWMSMLLFCLIALWWVC..........LATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFR.....SALLALPFIW
TGWEWAYMQQDFS...LGWLTFGNSQAN.LLWMVQYADVTGVWGVSFWLLTFNVLVLLLFMEKES..............F
QVKVGIVMVMLVMIATPLLYARQ.VFRNTALDNTSPKVRVALVQPDIDPHEK..WDGLGPEETLSRLYSLTGQSVRGE..
....R............LELIIWPETAIPFYIRLPENKP.....................YMDSVRRMVMRWNTPLLTGF
PDEVPVFPNSARGEAVAASGAEYAAYNASMLLHPAG......GPVQIYRKMRLVPFGERVP...YSEYFPWLERLSFSMS
..GISSWAKGREATVMHFTSRD.GQPVRMANIICYESIFPGQVSTF...VRRGAQFLTLVTNDGWYGTSYGPWQHAAIDR
LRCIENRRAMARCANTGVTLFYDICGRS
>OMNI|MT2322/65-441
GMGGFVLATQYWLVTSAGP..........MLVLLAAGLGVLWLPAGWLAHRLLSVPVTTCRVGA.......ALVVVPSAW
VAAEAVRSWQSLGG..P.WALLGASQWSQ.PVTLASASLGGVWLTSFLLVATNTAIASVLVCRAT..............G
GRLVALGCVIGCAGLGPASYLL....GSVPVG..GPTVRVALVQAGDIA.....DAAAR.LAAGEEFTAAVADQRP....
..................DLVVWGESSVGQDLTRHPDVLAR.......................LAELSQRVGADLLVNV
DAPAPDG................GIYKSAVLVGAHE......AVGS.YRKTRLVPFGEYVP...LRPLFGWITRYSKAAA
..KDRQR..GAGPVVLAVNS......LHIAPLISYEMTFSDLTRHA...ARLGAALLVYQSSTSTFQGSWAQPQLAAQPA
VRAVEAGIPAVHASLSGDSSAFDTRGRR
>SP|O83279|LNT_TREPA/67-484
YGAFSYGAFSYWLF................VFHPVALCVVAGFSALFLAALCLALKAGGAFWQRR......ALLVQCLVW
LGYEYAKTLGFLG...FPYGVMGYSQWR.VLPLIQVASVFGVWVVSALVVFPSAWLASVLGQWVEESERN...ARAFLSA
AYSHWVSALVWVGLCGFCVCAAK.AG.WWPDCTAHTRAKVALVQPNGDPR.R..GGIESYRADFSTLTYLSDWALER...
..YPD............VDLVVWPETAFVPRIDWHYRYRHEQQS..............FQLVCDLLDYVNAKNCPFIIGS
DDAYKKRTKEG........NWERVDYNAALLFIPGVN..VLPPSPQRYHKIKLVPFTEYFP...YKRVFPWFYNFLEKQD
...ARFWAQGSEFVVFEARG......LKFSVPICFEDAFGYITREF..CARG.ASLLVNISNDSWAKSLSCQYQHLSMAV
FRAIENRRALVRASTSGQTVAIAPDGRI
>OMNI|DR1353/95-462
AVFALTTIHLWWLTAFLGN..........IFSFPPAGVLAFALYALEGGFFALMAYVVARLVHSP....RGRVWALAGGW
GVVEYLRFLGPLA...FPWPTLGYALLP..TPLIQVADLGGVLLASVLILGLAAALASRSKK..................
..GVLTVSLVWLAALGYGLTR.........TPGEGPEQPMRVLRTTFDSFGR.ATGYVSPEQQFSQMLPVSQSRPP....
.................GSVLVWSETALMLPAPPS................................TVPQFPAPGITGL
RTLTP.D..................QNSVISVNTDG......QVTGQNVKAKLVPFGEEFP...FYRILKPVYGLFEKAL
GFEFGSLEAARTVQPLSLNG......VKYGTYVCYDSVFPWVARQL...ARQGAGLLVNPSNDGWYQG.WGVQQHFWMGR
VRAIEQRRWLVRSVNLGVAGAVDDLGRP
>GP|2896788|emb|CAA17265.1/76-479
FGLVFYVSLLPWIG...............ELVGPGPWLALATTCALFPGIFGLFAVVVRLLPGW........PIWFAVGW
AAQEWLKSILPFGG..FPWGSVAFGQAEG..PLLPLVQLGGVALLSTGVALVGCGLTAIALEIEKWWRTGGQGDAPPAVV
LPAACICLVLFAAIVVWPQVRH....AGSGSG.GEPTVTVAVVQGNVPRLGL..DFNAQRRAVLDNHVEETLRLAADVHA
GLAQQ............PQFVIWPENSSDIDPFVNPDAGQR.......................ISAAAEAIGAPILIGT
LMDVPGRP...........RENPEWTNTAIVWNPGT......GPADRHDKAIVQPFGEYLP...MPWLFRHLS.GYADRA
..GHFVP..GNGTGVVRIAG......VPVGVATCWEVIFDRAPRKS...ILGGAQLLTVPSNNATFNKT.MSEQQLAFAK
VRAVEHDRYVVVAGTTGISAVIAPDGGE
>SP|P74055|LNT_SYNY3/52-464
WGGGFYGVALFWITGVHPLTWLGVPWLASLAIAAFCWLAITAWGVVLVFVWLLAMAVWEVTTARTKVN.STFKKYLFILW
GTASWCGLETLWSHSILWWSPVAYTQSPSQLHFLQWGAIGGPALLSAFIVAVNGFLALGLIDFLDGKTVNKNK...QNWH
YFLIAILIWLFCQGGGWLLYQK....P.LADT.PEEKINVGIIQGNIPNQIK..FNSEGWQRAIAGYTEGYKKLTEQG..
.................AEIVLTPEG.ALPYLWETVVAKSG.......................FYQAILQTQVPVWLGA
YGTKGDG.................YTNSLLTVDGQG......KLLGRYDKFKLVPLGEYIP...LSNVFGQLIQRLSPLK
..EQLLP..GDRPQVLPTPFG......PAAVVICYESAFPDLLRSQ...LLQGGEFILSSANNAHYSDT.MAAQHHALDV
MRAIEGDRWLARATNTGLSAIINPRGKT