HMM Seed Alignment: TIGR00543

Download Alignment

>SP|Q9S7H8|ICS1_ARATH/198-557
IRAYGGMRFDPNGKIA...VEWEPFGAFYFSVPQVEFNEFGGSSMLAATIAWDDELSWTLENAIEALQETMLQVSSVVMK
LRNRSLGVSVLSKN....HVPTKGAYFPAVEKALEMINQKSSPLNKVVLARNSRIITDTD..IDPIAWLAQLQREGHDAY
QFCLQPPGAPA.FIGNTPERLFQRTQLGVCSEALAATRPRAASSARDMEIERDLLTSPKDDLEFSIVRENIREKLNGICD
RVVVKPQKTVRKLARVQHLYSQLAGRLTKED.DEYKILAALHPTPAVCGLPAEEARLLIKEIESFDRGMYAGPIGFFGGE
E..SEFAVGIRSALVEKGLG..ALIYAGTGIVAGSDPSSEWNELDLKISQFTKSI
>OMNI|CT1838/131-484
ARYIGGFCFNNLQKQN...KLWSAFSPGLFILPLVSIEYRDGQTLMTCSLWLEPGN..DRQKGLEQLLAALSAVSAGDAP
ETAGIPEMTQVS......YCPDKAQWIENCETILRNFDE..GKLDKVILARQTELSFAGK..VPAIRFLLDYPFPENTAY
RFYFEPVEGHA.FISFTPERLYRRDGDMLETEALAGTVTKEALKADDSIASELLLNSEKDIREHRFVKDTIYRELQPVCS
DIDMQEKVGVLQLNRLAHLLAKCKARLLPEFSNDSTVLRQLHPTPAVGGVPREKAMSLILSIEPFCRGWYAAPVGWLNRD
A..AEFAVGIRSALVNDDR...VYLYSGAGLVRGSNPESEWEEVDQKIGDILAIT
>SP|P44613|MENF_HAEIN/93-426
FPLVGGLQFQG...............TAQFVLPKMLVEQDNKGTLVSFFVKNEQS.....AND....TLAHLKTFENLTA
LSALPKQIPLHTE.....LRANERTWCDWVNQALVEIKS..GELTKIVLANETTFHLKQA..INAYDFLAESEKQNQGCY
HFLWAENSHSV.FVGSTPERLFAREYNLLLTEALAGTASVSESEEETQSQANWLLNDEKNLKENWLVVEDISQNLRKQVE
SFDVSN.VELKPLRKVQHLIRKIRANLTAH.YADVNILKAIHPTAAVSGLPQQQAKMILSEIETFDRGWYAGTLGVMSDV
C..SEFCVAIRSAFIEGHR...IRVFAGAGIVAGSQPLEEWKEIERKAAGLISLF
>OMNI|NTL03ST2243/91-427
LRIWGLNAFEP..............KEGYLLLPRLEWRRSGGTATLRLHLHSDVSL....RDDAR.LAKAFLASLVGIKP
VPALRLSLTSEQH.....W.PDKDGWVKLIQQATHTIAQ..EAFDKVVLARATDLQFSRP..VNAAAMMASSRRLNLNCY
HFFMAFSADTA.FLGSSPERLWRRRETALRTEALAGTVANHPDNHKAWQLGEWLMKDDKNQRENMLVVEDICQRLQNCTH
SLDVLP.PQVLRLRKVQHLRRCIWTALNQ..ADDTLCLHQLQPTAAVAGIPREPARCFIEQHEPFEREWYAGSAGYLSTR
Q..SEFCVTLRSAKVTANV...VRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLL
>OMNI|NTL01SS01551/121-473
PYIFCGFSFFD.RPSN.....RNPFANSFLFLPQIQVVKTSQHCLLSWQISLDGNT.....NVTDLVDFIGRMLSAIRRA
QPARDTHTPSMVVKAPRLTGIEVAKLSKAIASSLEEIAQ..QRLSKVVLATALDLDYGSR..LNVAHCLQRLRQQYGDCY
LFSWGNGQGDC.FVGASPERLLSLHNQQLVTDALAGSAPRDVDVQGDRQLGQELLHNPKELREHQAVLDYLLQRLRALGL
SPQASS.LKLLKLANIQHLWTQIQAPLP.PHIHPLALVQQLHPTPAVAGVPVAIAEDLIRRHETFDRNLYAAPLGWLDSE
G.NAEFIVGIRSALLSR...NRARLYAGAGIVAGSDPLKEVAEIELKLQTLWRSL
>OMNI|NTL01HS00837/89-440
PRLFGGFSFFDTHTAAG...VWQGFPPARFVLPAIQLTSVGDETWLTA.IEAGPDA.....TVASASASLADARDAVDSL
PAMQAAGPRPGVTDTTPTPGRDA..WTAGVQDAVDRIQS..GPLRKVVLATALRADLAEP..ATPCALLERLRQRYPACF
RFLVAPADGGV.FLGATPERLASLRGGRVETVALAGSVGRGDSPAADARLADRLRESDKLRHEQGVVVDTIARRLEGIGD
VAVGDR..DVRQLSTIQHLETPISAAVS.ADTHVLDVIETLHPTPAVNGLPPADALATIRDTETFDRGWYAAPIGWIDAD
G.DGTFGVGLRSGVVDD...DSVTLFAGNGIVGDSTPDAEWEEVQLKYRPVLDEL
>SP|Q51508|PCHA_PSEAE/108-460
PRLCGGFRFDPRGPREE...HWQAFADASLMLAGITVLREGERYRVLCQHLAKPGE.....DALALAAYHCSALLRLRQP
ARRRPSGPTAGAQGDASAQERRQ..WEAKVSDAVSSVRQ..GRFGKVVLARTQAR.PLGD..IEPWQVIEHLRLQHADAQ
LFACRRGNA.C.FLGASPERLVRIRAGEALTHALAGTIARGGDAQEDARLGQALLDSAKDRHEHQLVVEAIRTALEPFSE
VLEIPDAPGLKRLARVQHLNTPIRARLA.DAGGILRLLQALHPTPAVGGYPRSAALDYIRQHEGMDRGWYAAPLGWLDGE
G.NGDFLVALRSALLTP...GRGYLFAGCGLVGDSEPAHEYRETCLKLSAMREAL
>OMNI|BRA0016/74-387
PIVVGAIPFDPGEPSC.............LYVPEEMDWQE....REPASGAS.........AAAMPQLAGQ.........
.....RSVPDEAG............FKHAVEHAIINFRL..SDVRKAVLSVMRELTFADD..IDVDAMLANLRAQNHDGY
QFRVPLPGGGA.LVGVSPELLIHKDKGKIVSNPLAGSAKRMADPEADRKNADRLAKSEKDHYEHRLVIEDIRARLQPICT
ELDIPERPSLIHTAALWHLSTRIEGRLHDPDMTALQLACLIHPTPAVCGFPTERARRLIRFVEPFERGLFTGMVGWSDAE
G.NGEWVVTIRCGTVKG...NLVRLFAGAGIVEASSPDSEWAEVQTKLGTMLRAC
>OMNI|EF0447/98-451
ALLFGGLPFDTEQT...PTEAWGELGEGWFYLPSILFTFSGSRIYGTLNFSGSSEQ...EVEERWSTLVAQFDRLLATC.
.EELPAVAETKIDK....EEVAVTEWLQAVNETVAVLRED.GPLKKVVLARQLAVSSPEK..IRSNQVLVNLMAQQQNTY
LFALE.AKDTS.FIGATPERLLLGTKETFATACIAGTIKTGQTPEETKTLGAQLLQDRKNTGEHQIVVERLAKELAKMTT
SENSIQAPIILENRDVQHLYVPISGQRKPG.ISFLESVMQLHPTPALGGEPKELAVEWIRQYEPGSRGLYGAPIGWISGN
DDSGEFAVALRSGVFAGQQ...GVLYAGCGIVADSQAELEREETKIKFQPMLRGI
>OMNI|NTL02SA1036/102-445
LRVVGGFQFSSHK....SDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVK..RES...FTVEALNDLMDLFNNISDID.
...VDEQIGEITRN....EDIYKDDWRQLVVEAIESINN....EEKIVLARRRLIKFDKD..ISIPYILKQAYSKEKNSY
IFLLE.SQDSI.FFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAFLKDNKNLIEHRFVVDSILHDIKPYIT
ELHYDKTPKILKNDHLYHLYTEIKAP.LKD.DSYISLIDHLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYIDIY
D.DCEFIVAIRSMLIKKAQ...ATLFAGCGIVKDSDPDSELAETNLKFTPMMNAL
>OMNI|NTL01LL0745/99-404
WENFGG....ET.................IAFKHYFVVNKENSYTLTCDSP..........REIPEITIPKFK.......
.....HQLTEKAS........DFSAWQELFYAIQKNFAD..GKSRKIVASRELEFTSQTS..FELESIIQNLLDNNPNAF
IFAYQ..KGKRIFLGASPEILVQKENDQLLSYALAGTFPKTMEN.....AGQKLLTDPKNLLEHDIVVQKIKRNLLEKAE
TVTVGT.TELMELKNVYHLRTILSAKNSE..LSLIDWTKQLHPTPALGGEPRHEALEFLRKHENHERGLYAAPLGLIDSK
G.NGTMIVGIRSALIVDKK...LYAYAGCGIIPSSDALEEFRETKVKLKTILEAL
>OMNI|PG1525/47-356
VPCFVAAPFDSEEE..............AYFIPGEFECEG....DLTDKAVR..........DLKDAVFSG.........
.....IRMPCPES.....GDMDKEAYRTAFEEIMRRIDS..GVLEKVVLSRTLTLKRGDSGFSDVFSYWELLRRAYPHAF
VFLYFIPGKGV.WAGASPELLLDYTKGRVKTMALAGTRPVSFEG......ELLKPWTQKEIREQGVVRDYIREVLENHCR
SVEMSET.RTFMAGNICHLCTDFTALTGDG...LESLLKALHPTPALGGFPRKEALACIREVEVHERKFYGGYLGPVGKD
A..ARLYVNIRSMELFPG...AFRLYVGGGINGDSVFEDEWEETSDKAATLLNVL
>GP|29342020|gb|AAO79805.1/56-361
GFVIAPFRIDKS...................CPIVLIQSDRTGQPLPMEIVAE........EEQDLQSYPE.........
.....ESFHTLCTG..........KYATCFHTFIEALRD..ATFDKLVLSRSLTIGKNPE..FSPSAVFRAACQRYIHSY
IYLCYTPQTGV.WLGSTPEIILSGEKNEWNTVALAGTQPLQNGK.......LPQVWDDKNRQEQDYVASYIRRQLLSLGI
RSTESG.PYPAYAGALSHLKTDFHFSLKDN.KNLGDLLKVLHPTPAVCGLPKEEAYRFILENEGYDRKYYSGFIGWLDPE
G.RTDLYVNLRCMHIEDEQ...LTLYAGGGLLASSELNDEWQETEKKLQTMRRIL