HMM Seed Alignment: TIGR00435
Download Alignment>SP|O29836|SYC_ARCFU/1-467
MEVYNTLSRKIEKLEDIVDGKRVKMYVCGITAYDYSHIGHARSAVFFDVFRRYLE.YLGYEVVYVQNFTDV.........
.DDKIINRAVKEGKTQKEV.............................................................
...............................................AEKFIEEYLK.....DMEALNVKKPTYQPKVTE
HIPDIIEFIQNLIEKGYAYVID.GDVYFHVPAFE.....HYGELS...KQSLEELNR.HRIEPDERK......RDVKDFA
LWKSAKEADLKAQAVFDSPWGRGRPGWHIECSVMSAKYLG.....VPFDIHGGGKDLIFPHHENERAQSFARFG.VEPVK
IWVHNDFIRIKGEKMSKSLGNIVRIRDVLQ.RYEGEVLRYFLLTAHYRSPLDYTEEALERAK...RAYEYLRSALINLDM
EIAYLKTFGDRKEGNQV...DVEDYIRRFEE.......AMNRDLHTPDAIAVLHEFAGLINKS.....LYELSLNQAEEL
YEAFKRLCGVLGLFE...KMER........VPALSRED......AEKVVE.............RERARKERN....FELA
DAIR.DEFAKRGIRLIDTPKG.TRWRVE
>SP|P43816|SYC_HAEIN/2-459
LKIFNTLTREKEIFKPIHEN.KVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLR.SLGYDLTYVRNITDV.........
.DDKIIKRALENKETCDQL.............................................................
...............................................VDRMVQEMYK.....DFDALNVLRPDFEPRATH
HIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFK.....EYGKLS...RQDLEQLQAGARIEINEIK......KNPMDFV
LWKMSKEN....EPSWASPWGAGRPGWHIECSAMNCKQLG.....EYFDIHGGGSDLMFPHHENEIAQSCCAHG.GQYVN
YWIHSGMIMVDKEKMSKSLGNFFTIRDVLN.HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQ...GALERLYTALRGTDQ
SAV...AFG....G........ENFVATFRE.......AMDDDFNTPNALSVLFEMAREINK......LKTEDVEKANGL
AARLRELGAILGLLQ...QEPEKF......LQAGSNDD..EVAKIEALIKQ............RNEARTAKD....WSAA
DSAR.NELTAMGIVLEDGPNG.TTWRKQ
>SP|P21888|SYC_ECOLI/2-461
LKIFNTLTRQKEEFKPIHAG.EVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLR.FLGYKLKYVRNITDI.........
.DDKIIKRANENGESFVAM.............................................................
...............................................VDRMIAEMHK.....DFDALNILRPDMEPRATH
HIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDP.....TYGVLS...RQDLDQLQAGARVDVVDDK......RNPMDFV
LWKMSKEG....EPSWPSPWGAGRPGWHIECSAMNCKQLG.....NHFDIHGGGSDLMFPHHENEIAQSTCAHD.GQYVN
YWMHSGMVMVDREKMSKSLGNFFTVRDVLK.YYDAETVRYFLMSGHYRSQLNYSEENLKQAR...AALERLYTALRGTDK
TVA...PAG....G........EAFEARFIE.......AMDDDFNTPEAYSVLFDMAREVNR......LKAEDMAAANAM
ASHLRKLSAVLGLLE...QEPEAF......LQSGAQADDSEVAEIEALIQQ............RLDARKAKD....WAAA
DAAR.DRLNEMGIVLEDGPQG.TTWRRK
>SP|Q06752|SYC_BACSU/3-465
ITLYNTLTRQKETFVPLEEG.KVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLE.YKGYDVQYVSNFTDV.........
.DDKLIKAANELGEDVPTI.............................................................
...............................................SERFIKAYFE.....DVGALGCRKADLHPRVME
NMDAIIEFVDQLVKKGYAYESE.GDVYFKTRAFE.....GYGKLS...QQSIDELRSGA..RIRVGE....KKEDALDFA
LWKAAKEG....EISWDSPWGKGRPGWHIECSAMVKKYLG.....DQIDIHAGGQDLTFPHHENEIAQSEALTG.KTFAK
YWLHNGYINIDNEKMSKSLGNFVLVHDIIK.QHDPQLLRFFMLSVHYRHPINYSEELLENTK...SAFSRLKTAYSNLQH
RLNSSTNLTEDDDQWLE...KVEEHRKAFEE.......EMDDDFNTANAISVLFDLAKHAN.......YYLQKDHTADHV
ITAFIEMFDRIVSVL...GFSLG.......EQE......LLDQEIEDLIEK............RNEARRNRD....FALS
DQIR.DQLKSMNIILEDTAQG.TRWKRG
>SP|P74330|SYC_SYNY3/3-483
LRLYDSLTRAKQPLQPLHPG.LVTMYCCGITVYDYCHLGHARTCITWDLVRRYLQ.WSGYEVRYVQNFTDI.........
.DDKILKRAVDESSTMEAV.............................................................
...............................................SEKFIAAYFE.....DMEALGVQPADLYPRATH
TLDGIKRLIAELEAKGYAYPSG.GDVYYSVRNFD.....GYGKLS...GRRLEDLQAGASGRVTVADPDGAQKQDPFDFA
LWKSAKPG....EPAWESPWGKGRPGWHIECSAMVREFLG.....ETIDLHVGGNDLIFPHHENEIAQSEAVTG.QPLAQ
YWLHNGMVKVDGEKMSKSLGNFTTIRALLK.TVDPMAIRLLVLQGHYRKPLDFTETAIAAAT...NGWHTLREGLQ.FGY
DYGGDFGWELAFTPLGP...DANQWTVAFQE.......AVDDDFNFAGGLAVMFELAKHLRSEGNKLKFEGSTPADLDLL
QTQWITLVS.LAEIL...GLSINP......ESQSSNDNGLTDGDIEQLVAQ............RTQARKDKN....WAEG
DRLR.DVLQEAGITLVDKPGGLTEWFR.
>SP|P41259|SYC_HELPY/1-464
MFIYDTKLKQKVPFEPLVQN.KANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLE.LSGYEVMLVRNFTDI.........
.DDKIINKALKENKSIQEL.............................................................
...............................................SSIYIESYTR.....DLNALNVKKPSLEPKASE
YLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDK.....DYGSLS...VHNSS.IEFGRIGLVQEK.......RLEQDFV
LWKSYKGDN...DVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG.VELAK
YWMHNGFVNINNEKMSKSLGNSFFVKDALK.NYDGEILRNYLLGVHYRSVLNFNEEDLLVSK...KRLDKIYRLKQRVLG
TLG.....GIN..P.........NFKKEILE.......CMQDDLNVSKALSVLESMLSSTNEKLD...QNPKNKALKGEI
LANLKFIEELLGIGF...KDPSAY......FQLGVSES..EKQEIENKIEE............RKRAKERKD....FLKA
DSIR.EELLKQKIALMDTPQG.TIWEKF
>SP|P53852|YNY7_YEAST/36-663
LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGYDVQFVQNVTDI.........
.DDKIILRARQNYLFDNFVKENDTKFNATVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPM
HVTAVQNAIESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSE
YVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFAD.NG..KKSNNDFA
LWKASKAG....EPEWESPWGKGRPGWHIECSVMASDILG.....SNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWIN
YFLHTGHLHIEGQKMSKSLKNFITIQEALK.KFSPRQLRLAFASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKN
DAASAGHISKKFSP......LEKELLADFVESESKVHSAFCDNLSTPVALKTLSELVTKSN........TYITTAGAALK
IEPLIAICSYITKILRIIGFPSRPDNLGWAAQAGSNDG..SLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQLT
DKIRNEDLLNLNVALDDR.NGQSALIKF
>SP|P75423|SYC_MYCPN/8-437
FTLIDTVS.NQS..VVLEQK.QINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQ.AAQYKVQFVQNITDI.........
.DDKIIKIAQQQEISEAQL.............................................................
...............................................CKQQITAYKS.....LLKKLNILPIK.HLQVTD
KIDKMPGYIARLVKKGFAYVSPLGNTYFSVSQLP.....QYGILA...NRVVETIEDEATDK...........RNKLDFV
LWKQTTAG.....VKWNSPWGWGRPGWHVECAFLIDYSFK.....DQLTIHGGGVDLKFPHHENENAMHMALYD.KPLTQ
HWMHIGHLMFENQKMSKSLQNFLLAVDFLT.IHDFRILRWLFYQKHYYHPLDLSQSLIEQAC...SDIKRIQKAVNVCRT
WFVYS.EQSAIPAP........KQFEPVFK........ALLNNLNFANAITHIWKLVKQIN........HDVSKQNLSGL
KEHLSHLEWALNIL....GIGFKS......IHTKLN.........VQLIKK............WASLRKNGQ....LDKA
DEVR.QKLIKKGLL..............
>SP|P47495|SYC_MYCGE/1-428
.MIVDSVS.QKP..TTLVQK.TINIYLCGPTVYNDLHLGNTRPLIVFDVLNRVLK.KAKYTVNFVQNITDI.........
.DDKIIKIAQQQEVSESVV.............................................................
...............................................TKQQITAYKS.....LLKKLNILPIK.HIQITE
KIDKIPDYIDQLVNQNHAYVSTQNNVYFAVNSLK.....QYGYLA...NRMVH.LEETDTDK...........KNKLDFV
LWKITTAG.....IKWNSKWGLGRPGWHVECAFLIDYCFK.....NELTIHGGGVDLKFPHHENENALHMALYN.QPITK
HWMHIGHLMIENQKMSKSLQNFLLAVDFLN.FHDFRVLRWIFYQKHYLHPIDLNQSLIEKAN...NDIQRIAKTLNVART
WLVYS.EQSELISP........KQYDPVFS........ALLDNLNFANAVAAIWKLIKKIN........TSIKTKDFSVL
REQLSFLEWSIDLL....GISFKS......IHTKLN.........VRLIKE............WSILHKQKA....MDKA
DQIR.KKLIKKMLL..............
>SP|O51545|SYC_BORBU/3-480
LKLYNTRT..KD.FSELTNFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLR.FLGYKVNYAMNITDIGHLTGDLDD
GEDKVAKTAREKGLTVYEI.............................................................
...............................................SEFFTEAFFN.....DCRKLNIVYPDKVLVASK
HIPIMIEVVKILEEKKITYFSN.GNVYFDTSCFK.....SYGEMAG..IDLIDKDMTLPRVDVDKFK......RNKTDFV
LWFTNSKFK.DQEMKWDSPWGFGYPSWHLECAAMNLEYFK.....DALDIHLGGVDHIGVHHINEIAIAECFLN.KKWCD
VFVHGEFLIMDYNKMSKSRGNFITVKDLEDQNFSPLDFRYLCLTSHYRNQLKFSLDNLQASK...IARENLINKLSYFYE
SLDPVDLNTLNKDLKNFGFSVEKEYYDSFVE.......KISFDLNVAQGLALLWEIIKSDN.......LSFVSKLRLAFI
FDEIMSLNLREEILK...NLQNHD......VVIDEN........MKALIEE............RRIAKCEKN....FKRA
DEIR.DFFAKKGFVLVDTKEG.TKVKRG