HMM Seed Alignment: TIGR00358
Download Alignment>SP|O32231|RNR_BACSU/54-708
LIVRTRSDRYGIPEKMNLIKGKISAHAKGFAFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQSSGS.RQEGTVIRI
LERAIQRVVGTYTETRN.FG...FVIPDDKKITSDIFIPKN..GKNGAAEGHKVVVKLTSYPEGRM.NAEGEVETILGHK
NDPGIDILSVIHKHGLPGEFPADAMEQASSTPDTIDEKDLKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDDG....SY
KLGVHIADVSHYVTENSPIDKEALERGTSVYLV.DRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQGQVTEH.EIF
QSVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDMERLAQILRDKRMDRGAVDFDFKEAKVLVDDEGAVKDVVIR
ERSVAEKLIEEFMLVANETVAEHFHWMNVPFIYRIHEEPNAE....KLQKFLEFVTTFGY....VVKGTAGNIHPRALQS
ILDAVRDRPEETVISTVMLRSMKQAKYDPQSLGHFGLSTEFYTHFTSPIRRYPDLIVHRLIRTYLING......KVDEAT
QEKWAERLPDIAEHTSSMERRAVDAERETDDLKKAEYMLDKIG..EEFDGMISSVTNFGMFVELP.NTIEGLVHVSFMTD
..DYYRFDEQHFAMIGERTGNVFRIGDEITVKVVDVNKDERNIDFEIV
>OMNI|NTL01EC04069/81-739
QLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLR.VEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKG.RREARIVRV
LVPKTSQIVGRYFTEAG.VG...FVVPDDSRLSFDILIPPD..QIMGARMGFVVVVELTQRPTRRT.KAVGKIVEVLGDN
MGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGG....GW
RLWVAIADVSYYVRPSTPLDREARNRGTSVYFP.SQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGY.KFY
EAVMSSHARLTYTKVWHILQGDQ.DLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTE....AITSFRSVLAELGLE...LPGGNKP..EPRDYAE
LLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGG
YHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVG..NVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDN
..DYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLI
>SP|P44907|RNR_HAEIN/75-732
QLVFTKRKRYALPEKLDLFKGTVIGHREGFGFLQ.VDGKKDDLFIPNHQMQRVMHGDFVLAQPAGLDRRG.RREVRIVRV
LESRKKQIVGRFFLENG.FG...YVVPDDSRIGRDILVPNE..HRNGARMGQVVVVELQERSASFN.QPIGVITEILGDN
MAKGMEVEIALRNHDILHKFPSAVEKYVKKFTEEVSEEAKKGRVDLRNLPLVTIDGEDARDFDDAVYCEK.HGK....GW
KLWVAIADVSYYVRLRSTLDVEAHNRGNSVYFP.NRVVPMLPEILSNGLCSLNPQVDRLCMVCEMQISAKGKLTDY.RFY
EAVMNSHARLTYTKVAKMLEGDE.ELRTRYSTLVPHLEELYKLYQALLSARHQRGAIDFETIETKFIFNAMGRIERIEPV
VRNDAXKIIEECMXLANIAAANFMEKHKEPALYRIHATPSEE....KLTSFRTFLSEFGLT...LEGGLKP..TTKDYAA
LLEKVKERPDHELIQTMLLRSLSQAVYHADNIGHFGLALEEYAHFTSPIRRYPDLTLHRGIKYLLAKEQGAKRKTTDTGG
YHYSFDEMDLLGNHCSMTERRADDATREVADWLKCEYMQDHVG..GEFSGVISSVTGFGLFVRLDDLFIDGLVHISTLEN
..DYYQFDAAKQRLIGENSGMQYRLGDKVRIKVEAVHLENKMVDFSLI
>SP|P47350|RNR_MYCGE/66-725
QLLVN..YEPAEPLLDKKLQGILTLGNKNSGFIRSLDDDKTVYYVHYSNLTGALDGDLVEFCKLDKPQFGDKFDAAVITI
LKRARILYAGNFLVDQNEFALEYKIVADNPRFYLTMIVNPDS.IPNNLASNTKIAFQIDEYDPDNN.LCKVSVQQVLGNN
DDPLINIKAIMLDNSIVFETNDVVEQHANKLSFDTEEQHKAYRQDLTDLAFVTVDPTTSKDLDDAIYVKT.IPT....GF
VLYVAIADVAHYVNRNSEIDIEAKHKTSSIYLPGHYVVPMLPEQLSNQLCSLNPAQKRYVVVCEISFDNQGRIKTN.KLY
PATIISKNRFSYDQVNKWLNNKS.ELNCD.ETVINSLKAAFTLSDLIQAQRQKRGTIDLSHKETEIVVDEHYFPIKINFL
VHDKAETMIENLMVVANETVAWVLTNNKIALPYRVHPRPSKK....KLQSLIETVGELNIT...KPQFNLDTVTSSQIAS
WLNENKDNPSYEIFVILLLRTLGKAFYSVNPLMHFSIGSNHYTHFTSPIRRYIDLTIHRLLWMHLFTP....DQFTDNE.
RDQLKQELEKIADTVNDTEIKIINCERNANDYLTTLLLSKQIG..KTFSGFISAITSFGIFMRMDENNFDGLIKITTIPD
..DFFIFEKEKMVLKGRKTNKVYKIGDRLEAKLSEIDFIQKRAILTLI
>SP|P75529|RNR_MYCPN/66-726
QLLIN..YELADPVLDQKFQGILNLGNKNTGFVRPLDDDKTVYYIHFSNLAGALDGDLVEFCPLDKPQVGDKFDAAVLKI
VKRSRVLYAGNFLIEYSDFGQEFRIVADNPRFYLTPIVNKAS.VPAELESNTKVAFQIDEYDPANN.LCKVSIQQILGNN
DEPLINLKAIMLDHSIVFEDNDVVEQQAAKLQFDEKEQSKPYRKDLTELAFVTIDPATSKDLDDAIYVKR.TDK....GF
VLYVAIADVAYYVQRNSELDIEARHKTSSIYLPGYYVVPMLPERLSNELCSLNPNEKRYVVVCELNFDHEARLNFS.EVY
PATIVSQRRFAYSEVNDWLEDSD.ALKDESATVLESLKAGFTLSELIAEQRKKKGTIDLSHSETEVVVDQNYYPIEIRFL
THGKAETMIENLMVVANEAVAWTLTNHKVHLPYRVHPRPSKK....KLQMLLENIVELKIT...QPNFVLDTVTSTQIAA
WLKENKDNPSYDIFVILLLRTLGKAFYIVNPLIHFSIGSHHYTHFTSPIRRYADLTVHRLLWMNLFTP....ERFTDTE.
REQLNAELEQICETINDTEIKINGCERTANDYLTTLYLSKQVG..QTFHGFISAITSFGIFMRMDENNFDGLIKITSIPE
..DFFVFEKDRMVLRGKRTNKVFRIGDRLTAKLTEIDTVQKRAILTLV
>SP|P30850|RNB_ECOLI/6-643
PLLAQ..LKQQLHSQTPRAEGVVKATEKGFGFLEVDA..QKSYFIPPPQMKKVMHGDRIIAVIHSEKERE...SAEPEEL
VEPFLTRFVGKVQGKND.R...LAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFG
DDHFVPWWVTLARHNLEKEAPDGVATEMLDEGL........VREDLTALDFVTIDSASTEDMDDALFAKALPDD....KL
QLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLP.GFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFF
AATIESKAKLVYDQVSDWLENTG.DWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAE
PRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFDP.....ANADALAALLKTHG.....LHVDAEEVLTLDGFC
KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGE.......TATR.
...PQDEITVQMAER...RRLNRMAERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHA
VRDELVCSQENGTVQIKGE.TVYKVTDVIDVTIAEVRMETRSIIARPV
>SP|P44440|RNB_HAEIN/6-658
PLLAQ..LKQQIHDSKEQVEGVVKSTDKAYGFLECD...KKTYFIAPPSMKKVMHGDKIKATIEKQGDKE...QAEPEAL
IEPMLTRFIAKVRFNKD.KK..LQVLVDHPSINQPIGAQQAKSVKEELQEGDWVVANLKTHPLRDDRFFYATINQLICRA
DDELAPWWVTLARHEQSRYPVRGAEPYEMLDQK........TRENLTALHFVTIDSESTMDMDDALYIEPIAQNSTQTGW
KLVVAIADPTAYIALDSQIEQEAKQRCFTNYLP.GFNIPMLPRELSDELCSLIANETRPALVCYIETDLTGNITAKPHFV
SAYVQSKAKLAYNKVSDYLEQADNAWQPEMPETAQQIHWLHQFTKARIQWRKTHSLFFKEKPDYAFVLAENGKVQEIKAE
YRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNTHSGFDKKFLENAHNFLMANLANEQNQTELAERYSVENLATLNGYC
QMRHDIEPIESDYLELRLRRYLTFAEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQ.......PYEK.
...PQNDVLARLQEA...RRQNRLVERDIADWLYCRYLADKVASNAEFEAEVQDVMRAGLRVQLLENGASLFIPAATLHN
NKEEIQLNPDELALYIKGE.RTYKIGDMVKVKLTEVKEATRSIVGEIL