HMM Seed Alignment: TIGR00344
Download Alignment>SP|Q57984|SYA_METJA/61-874
EMVKEFINFFKEHGHEPIKRAPVTARRWRDDILLTIASIAVFQPWITKGIVKPKA-----NPLVIAQPCIRL----NDID
NVGRTGRHLTCFTMGGHHAFNREDDFKYWQDETVELCFNFFKK---LGIDEKSITF------------------------
--------------------IESWWEGG--GNAGPCYEVI-------THG----------------VELATLVFMQYEKV
GD-N-------YKEIPLKIVDTGYGIERFVWASTGEPTIYDA-IFKNIVNKLKEDAGVKDIDKE-----ILAKITEVAGL
MDVKDVGDLRKLREEVANKVNIPVEELDKLISPYEDIYAIVDHTRALAFMLGDGIVPSNVKDGYLVRMLIRKTLRHMDRL
NLS--TP-ITEIVAMQLNELKDLYPELLDMEDYIMEILEIETNKYRQTIERGKGIVERLLK-----SKKEIDLENLIELY
DSHGLPPEIVKDVAKSLGKDVKIPDNFYTIVAERHENK-KEVKEK----IKLPEVNV---------DKTELLFYEYPKMK
EFEAKILRIV---------------DDYVILDRTAFYPEGGGQKADTGYII----KGDKKFRVVDVQK-ENNIVYHKIEN
LNDELKEGDIVKGVIDWKRRLSLMRNHTATHIINAAAQKVLGRHVWQAGSDVDVDKARLDITHYKRISREELKDIERVAN
EIVLNNYNIKSIFMDRNEAEEKFGFRI-YQGGVVPGNVLRIVIIE-----------DENGNIVDVQACGGTHCQNTGEVG
FIKIIKTERVQDGVERLIYSSGLSALK-------------------AVQEMEDILEESAEILRCPTEELPKVIK---RFF
EEWKEQRKKIEELEKKIGELKKFELINKFETIGNYKVLVEKVEA--NPKEMLNIADNLAT-------ENAIVVL----LN
DKGNILCKRGENV----DIKMNELIRYIAK----------GGG-----REHLAQGKY
>SP|O27718|SYA_METTH/58-876
EIQDKFMEFFAERGHEPIRRYPVLAKRWRDDVFLVGASIYNFQPWVTSGLVKPPA-----NPLVVAQPSIRL----NDVD
NVGRTGRHLTCFTMGGHHAFNSEDNTVYWEEETIKYCHDFLTH---IGIDPSEITF------------------------
--------------------IESWWQGG--GNEGPCYEVC-------VRG----------------VELATLVFIQYRTL
PDGG-------REEIPLKIVDTGYGLERFAWISQGTPTAYDA-CLGPVIEKLVELTGVKIDEEI------LAENAQVAGM
MDIETYADLRELRKRVADKLGISVEELERAAAPMESVYAIADHTRCLAFMLADGVIPSNVKEGYLARLIIRRTLRLMKDL
GMK--ES-LKDIMNIQVEFLEGHYPEIRSHHEHILNIIDLEEHRYARTVKRGRRIVEKTIKYLKRDGKAEMPLEILIKLY
DSHGIPPETIGEIAEESGFQVKIPDNFYTLVAERNETE-----------TEMPEEDV-----HLDYPATELLFYDEPDDL
EFQAEVIGIH---------------ENGLILDRTLFYPEGGGQPSDTGYIT----AEGCRLRIKHAEK-IGAVVVHRTDD
EI-CIEPGTTIRGFIDSDRRLQLTRNHTATHLIVSAARKVLGDHIWQAGAQKGVKSSRLDLSHYRRITLEELQEIERLAN
EYVMMNVPLKVRWMDRDLAERKYGFIL-YQGGVVPGSRIRVVEIP-----------G-----VDVQACAGTHVHRTGDIG
LIRINRTERIQDGVERIEFSAGSAAIE-------------------IMQKTGDILRESSDIFKVTPSQLPGTCE---RFF
TEWKALRNEVSRLKEKVASLKILEMKDRAERINDLTVIIDTVDA--DMDEMKNMALELSAT------VDAVVL-----AN
PEGKIVGAASEDAVK-AGLRINEVISQAAA-----VLGGGGGG-----RPHLAQGAG
>SP|O28029|SYA_ARCFU/64-884
EMREYYLNFFERRGHGRIERYPVVA-RWRTDIYLTIASIADFQPFVTSGVAPPPA-----NPLTISQPCIRL----DDLD
SVGRTGRHLTLFEMMAHHAFNYPGKEIYWKNETVAYCTELLNE---LGVKKEDIVY------------------------
--------------------KEEPWAGG--GNAGPCLEAI-------VGG----------------LEVATLVFMNLEEH
PEGDIEIKGARYRKMDNYIVDTGYGLERFVWASKGTPTVYDA-IFPEVVDTIIDNSNVSFNREDERVRRIVAESSKLAGI
MGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCILFMLGDGLVPSNAGAGYLARLMIRRSLRLAEEL
ELG--LD-LYDLVEMHKKILGFEFDVPLST---VQEILELEKERYRTTVSKGTRLVERLVE-----RKKKLEKDDLIELY
DSHGIPVELAVGIAAEKGAEVEMPKDIYAELAKRHSKAEK---------VQEKKITL-----QNEYPATEKLYYDDPTLL
EFEAEVIGVE---------------GDFVILNRSAFYPESGGQDNDVGYLI----ANGGKFEVVDVLE-ADGVVLHV--V
KGAKPEVGTKVKGVIDSDVRWRHMRHHSATHVLLYSLQKVLGNHVWQAGARKEFSKARLDVTHFRRPSEEEIKEIEMLAN
REILANKPIKWEWMDRIEAERKFGFRL-YQGGVPPGRKIRVVQVG-----------D------DVQACGGTHCRSTGEIG
MLKILKVESIQDGVIRFEFAAGEAAIE-------------------AVEEMERLLREASSILRVEPAKLPKTVE---RFF
EEWKDQRKEIERLKSVIADLWADILMERAEEFDSMKVVAEVVDA--DMQALQKLAERLAEK------GAVGCLMAK--GE
GKVFVVTFSGQ------KYDARELLREIGR-----VAKGSGGG-----RKDVAQGAV
>SP|P43815|SYA_HAEIN/6-853
EIRQSFLDFFHSKGHQVVESSSLVP-ENDPTLLFTNAGMNQFKDVFL-GMDKRPY-----SRATTAQRCVRPGGKHNDLE
NVGYTARHHTFFEMLGNFSFGD-----YFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDD--------EAYNIWNKD
VGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPE----EDGDRYIEIWNVVFMQFNRL
ADGT-------MEKLPRPSVDTGMGLERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNK----------------
----------SLR-------------------------VIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHGHLL
GAK--ESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQV---KDGILSGEVAFKLY
DTYGFPLDLTADVCRERNITIDEQ-AFDRKMEAQRTRA-QAASQ-----FGVDYNSV-----IRVDGETKFEGYTE---V
ESQAKITALF-YDGKSVESI-EAGQSAVVILENTPFYAESGGQIGDSGYLS----TQSVTFNVKDTQK-YGQVFGHIGEL
TQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVN
QKIRANFPVQTDIMDIDSAKAKGAMAL-FGEKY--GDKVRVLTMG-----------D-----FSIELCGGIHAKRTGDIG
LFKIITENAVAAGIRRIEAVTGQNAID-------------------WLHNQQRILTQSADLLKSDVNTLAEKIQ---QLQ
DKAKKVEKELQGLKEKAAMQAGSYFVKSAVKINGVSVIAQQLDGI-ETKSLRVMVDDLKNQL-----GSGVIAFASI-LD
EKVNLVVGVTNDLTA--KIKAGELVNLMAQ-----QVGGKGGG-----RPDMAMAGG
>SP|P00957|SYA_ECOLI/7-854
EIRQAFLDFFHSKGHQVVASSSLVP-HNDPTLLFTNAGMNQFKDVFL-GLDKRNY-----SRATTSQRCVRAGGKHNDLE
NVGYTARHHTFFEMLGNFSFGD-----YFKHDAIQFAWELLTSEKWFALPKERLWVTVYESDD--------EAYEIWEKE
VGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPE----EDGDRYIEIWNIVFMQFNRQ
ADGT-------MEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK----------------
----------SLR-------------------------VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNML
GAK--ETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKL---SGDTLDGETAFRLY
DTYGFPVDLTADVCRERNIKVDEA-GFEAAMEEQRRRA-REASG-----FGADYNAM-----IRVDSASEFKGYDH---L
ELNGKVTALF-VDGKAVDAI-NAGQEAVVVLDQTPFYAESGGQVGDKGELK----GANFSFAVEDTQK-YGQAIGHIGKL
AAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVN
TQIRRNLPIETNIMDLEAAKAKGAMAL-FGEKY--DERVRVLSMG-----------D-----FSTELCGGTHASRTGDIG
LFRIISESGTAAGVRRIEAVTGEGAIA-------------------TVHADSDRLSEVAHLLKGDSNNLADKVR---SVL
ERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGV-EPKMLRTMVDDLKNQL-----GSTIIVLATV-VE
GKVSLIAGVSKDVTD--RVKAGELIGMVAQ-----QVGGKGGG-----RPDMAQAGG
>SP|P56452|SYA_HELPY/2-824
DIRNEFLQFFQNKGHAVYPSMPLVP--NDATLLFTNAGMVQFKDIFT-GIVPRPS----IPRAASSQLCMRAGGKHNDLE
NVGYTARHHTLFEMLGNFSFGD-----YFKEEAILFAWEFVTKN--LGFKPKDLYISVHEKDD--------EAVKLWEKF
--VPVDRIKKMGD-------KDNFWQMGDSGPCGPCSEIYIDQGEKHFKG----SEDYFGGEGDRFLEIWNLVFMQYERS
NDGV-------LSPLPKPSIDTGMGLERVQALLEHKLNNFDSSLFAPLMEEISELTSLDYASEF----------------
--------QPSFR-------------------------VVADHARAVAFLLAQGVHFNKEGRGYVLRRILRRALRHGYLM
GLK--EAFLYKVVGVVCEQFANTHAYLKESKEMVVKECFEEEEHFLETLESGMELFNLSLKHLN--ENKIFDGKIAFKLY
DTFGFPLDLTNDMLRSHGACADMQ-GFELCMQEQVKRS-KASWKGKQ--NNADFSAI-----LNAYAPNVFVGYET---T
ECSAKVLGFFDSDFKEITDA-NPNQEVWVLLEKTPFYAEGGGAIGDRGALF----KDNGEVAIVLDTKNFFGLNFSLLEI
KK-ALKKGDQVIAQVSDE-RFEIAKHHSATHLLQSALREVLGSHVSQAGSLVESKRLRFDFSHAKALNDEELEKVEDLVN
AQIFKHLNSQVEHMPLNQAKDKGALAL-FSEKY--AENVRVVSFK-----------E-----ASIELCGGIHVENTGLIG
GFRIVKESGVSSGVRRIEAVCGKAFYQ-------------------LAKEENKELKNAKTLLKN--NDVIAGIN---KLK
ESVKNSQKAPVSMDLP------------VEKIHGVNLVVGVV----EQGDIKEMIDRLKSK------HERLLAMVFKKEN
ERITLACGVKNA-----PIKANVWANEVAQ-----ILGGKGGG-----RGDFASAGG
>SP|O34526|SYA_BACSU/8-857
EVRQMFLDFFKEKGHAVEPSASLVP-HEDPSLLWINSGVATLKKYFD-GRVVPEN-----PRIVNAQKAIRT----NDIE
NVGKTARHHTFFEMLGNFSIGD-----YFKEEAITWAWEFLTSDKWIGFDKELLSVTVHPEDE--------EAYEFWAKK
IGIPEERIIRL---------EGNFWDIGE-GPSGPNTEIFYDRGEA-YGNDPEDPELYPGGENDRYLEVWNLVFSEFNHN
PDGT-------YTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLFVPIIKATESISGETYGKDN----------------
------VKDTAFK-------------------------VIADHIRTVAFAVSDGALPSNEGRGYVLRRLLRRAVRYAKTI
NIH--RPFMFDLVPVVAEIMADFYPEVKEKADFIAKVIKTEEERFHETLNEGLAILSEMIKKEKDKGSSVISGADVFKLY
DTYGFPVELTEEYAEDENMTVDHE-GFEEEMNQQRERA-RNARQDVG-SMQVQGGAL-----RDVTVESTFVGYSQ---T
KADANIIVLL-QDGQLIEEA-HEGESVQIILDETPFYAESGGQIGDKGYLR----SEQAVVRIKDVQKAPNGQHVHEGVV
ESGTVQKGLHVTAEVEDHMRSGVIKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDFSHFGQVTKEELEQIERIVN
EKIWASIPVSIDLKPIAEAKEMGAMAL-FGEKY--GDIVRVVQVG-----------D-----YSLELCGGCHVRNTAEIG
LFKIVSESGIGAGTRRIEAVTGQGAYV-------------------EMNSQISVLKQTADELKTNIKEVPKRVA---ALQ
AELKDAQRENESLLAKLGNVEAGAILSKVKEVDGVNVLAAKVNAK-DMNHLRTMVDELKAKL-----GSAVIVLGAV-QN
DKVNISAGVTKDLIE-KGLHAGKLVKQAAE-----VCGGGGGG-----RPDMAQAGG
>SP|P74423|SYA_SYNY3/12-855
EIRQQFLNFFADRQHQILPSASLVP--EDPTVLLTIAGMLPFKPIFL-GQKSAEF-----PRATTSQKCIRT----NDIE
NVGRTARHHTFFEMLGNFSFGD-----YFKSQAIAWAWELSTQV--FKLPAERLVVSVFEEDD--------EAFAIWRDE
IGIPAHRIQRMGA-------DDNFWVSGPTGPCGPCSEIYYD-----FHPELGDEKLDL-EDDSRFIEFYNLVFMQYNRD
NAGN-------LTPLEKKNIDTGMGLERMAQILQKVPNNYETDLIFPIIQTAANIAGIDYAQAN----------------
-----EKTKVSLK-------------------------VIGDHVRSVVHMIADGISASNLGRGYVLRRLIRRVVRHGRLL
GIN--GEFTTKVAATAVQLAQPVYPNVLERQSLIEQELQREEAAFLKTLERGEKLLADLMAD----GVTEIAGADAFTLY
DTFGFPLELTQEIAEEQGITVDVE-GFEKAMQEQQERS-KAAHETIDLTVQESLDKL-----ANHIHPTEFLGYTD---L
QSSAIVKAVL-VGGELVDQA-VAGQTVQIVLDQTPFYGESGGQIGDKGFLN----GDNLLIRIEDVKR-ESGIFIHFGRV
ERGTVQIGTTITATIDRACRRRAQANHTATHLLQSALKRVVDEGISQAGSLVDFNRLRFDFNSPRAVTMEELQQIEDLIN
QWIAEAHQTEVAVMPIADAKAKGAIAM-FGEKY--GAEVRVIDVP-----------G-----VSLELCGGTHVANTAEIG
LFKIVAETGIAAGVRRIEAVAGPSVLD-------------------YLNVREAVVKELGDRLKAKPEEIPDRVH---QLQ
QELKASQKQLEALKQELALQKSEQLLTQAQTVGEFKILVADLGTV-DGESLKTAAERLQQKL-----GESAVVLASIPEE
GKVSLVAAFSPQLVKTKQLKAGQFIGAIAK-----ICGGGGGG-----RPNLAQAGG
>SP|P40825|SYAC_YEAST/13-935
NVRNTFLDYFKSKEHKFVKSSPVVP-FDDPTLLFANAGMNQYKPIFL-GTVDPASDFYTLKRAYNSQKCIRAGGKHNDLE
DVGKDSYHHTFFEMLGNWSFGD-----YFKKEAITYSWTLLTEV--YGIPKDRLYVTYFEGDEKLGLEPDTEARELW-KN
VGVPDDHILPGNA-------KDNFWEMGDQGPCGPCSEIHYDR----IGGRNAASLVN--MDDPDVLEVWNLVFIQFNRE
QDGS-------LKPLPAKHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGN-------------FGE
NDKDGIDT--AYR-------------------------VLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKY
MNYPIGNFFSTLAPTLISQVQDIFPELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLY
DTYGFPVDLTELMAEEQGLKIDGP-GFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYGS---A
NVEGTILKLH-DGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV---IDDAAEFNVENVQL-YNGFVFHTGSL
EEGKLSVGDKIIASFDELRRFPIKNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICN
EQIKENLQVFYKEIPLDLAKSIDGVRAVFGETY--PDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHVNKTGDIK
YFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEKKLKELGVKLGQLSISVITKNELKQKFN
KIEKAVKDEVKSRAKKENKQTLDEVKTFFETNENAPYLVKFIDISPNAKAITEAINYMKSN--DSVKDKSIYLLAGNDPE
GRVAHGCYISNAALA-KGIDGSALAKKVSS-----IIGGKAGG-----KGNVFQGMG
>SP|P47534|SYA_MYCGE/7-874
KVRQTWLDYFAKKDHLVLASKSLIP-INDPSLLWINSGVATLKDYFS-ARKTPPS-----KRLVNAQICLRV----NDIE
NVGFTSRHQTLFEMLGNFSIGD-----YFKTEAIDFAFDLLVNY--YQLDPKRFYITVYEDDE--------TTYKRWIKH
-KIDKNHIIKCDK-------SRNFWDLGL-GPCGPCTEIYYDRGEKFDPKKIGEKLFFEDIENDRYVEIWNIVFSQFNND
GNGN-------YTELAQKNIDTGAGIERLVSVLQNSPTNFDTDIFLKLIKIIEAFCPFKYDPNS-------------YFT
FDPQKVKEQSYFR-------------------------IIADHFKAITFTISEGVLPGPNERNYVVRRLLRRALIACKKL
QLN--LAFIEKIIDEIIASYENYYQHLKAKNETVKQVVLKEINAFNKTIDLGLVLFEKSV------KNNTLTPQLTFQLN
ETYGFPVEIIRELVNQKGLTIDWT-VFDQLMAKHRSIS-KQNNQTIN--FEKQNINL-----VNFKTKSTFF-YHK---N
KINAKVIGLFDENYLPVKEL--NNQSGYVVFDQTVLYATSGGQRYDEGSCINHSNNNDQKISFQGVFKGPNKQHFHY--F
LVGSFKLNDQVTLSHDETWRKLAANNHSLEHLLHAALQKEIDPLIKQSGAFKSAQKATIDFNLNRHLTRNELEKVENKIR
SLIKQKISSKEIFTDFEGSQKLNAIAY-FEEEYSQHEILRVIRFG-----------D-----YSVELCGGTHVANTASIE
DCFITDFYSLGAGRWRIEIISSNETINN------------------YLKAENQKLIQLKSELEKVLSLIDSSI-----FK
VELKELQQRLDKFILP---EKITQLRDASDTLLALKNDINQLKTKNYKVSQQALALSIKKQLLSLVDENKSYVIATF-ND
VEPKLLLQTLHDVFNQNQTKNFLIINQFNESNSFIVIGNKTTTIIEKLRNSFNLKGG
>SP|P75368|SYA_MYCPN/7-873
KVRQTWLDYFTAKGHLALPSKSLIP-VNDPSLLWINSGVATLKDYFS-AKKTPPS-----KRLANAQICLRV----NDIE
NVGFTSRHQTLFEMLGNFSIGD-----YFKEEAIGFANDLLVNH--YHLDPKRFYITVYQDDE--------LTFNTWLKH
-GIPASRIIKCDR-------DRNFWDLGL-GPCGPCTEIYYDRGERFDPHKVGEKLFFEDIENDRYVEVWNIVFSQFNND
GNGN-------YSELAQKNIDTGAGIERLVAILQDAPTNFDTDIFLKLIGIIEQHCKHKYDTNL-------------YFK
FDQKLNEAQSAFR-------------------------IISDHFKAITFTIAEGVLPGPNERSYIVRRLLRRALLACKKL
DLD--LKFIDPMVDAIISVYGSYYQQLQGKNQVVQQAIWKEVTAFDKTINLGLMLFEKSI------AHNALQPQVAFQLY
ETYGFPIEMIKELVDKRQLQVDWK-AVEQLMEQHRLIS-KQNSNTLS--FEKQNEHL-----VNFKTASEFL-YEA---N
EITAKVIGLFDEQYQPVQKL--HNQSGYVVFDQTVLYATSGGQRYDEGYCI-NHSQNDQRVSFQGVFKGPNKQHFHF--F
LTGSFQLGDKVILVHDGKWRQLVKNNHSLEHLLHAALQNEIDPLIKQDGAFKSAQKATIDFNFSRALTWAELERVEHRIR
QIIQQDIQREEIFTDLEGSQKLNAIAY-FEEEYSNHELLRVIRFG-----------D-----FSVELCGGTHVEHTGLIE
NCFITDYYARGTGRWRIEIISSNETIAA------------------YLNEQNGKLSETINSLHNTLNNIANPA-----LN
KQKTALTKQLNHFHLP---QVITDLRKCQALLNELKITVNELKTEDFKWKQKQLAEKIKQELLELAKQDKAYVLASF-AA
VDPKLLSQVAQAVLNQHKNKLFVLLNQFNNSPSFMLLGQDVSKCIQLLKAHFELKGG