HMM Seed Alignment: TIGR00287

Download Alignment

>OMNI|NTL02ST2812/16-312
SLEIADYGVKLSTKGKTFVISKKDG--KKV---NVSPAEVDQIVIMTSGVTVTSKAIRLALDHGIDIIFLDSRGNPFGR-
---------LFHSEPIKTVETRKAQYLAILK-GEEE-IPREIIKSKIKNQANHIKFWFKKLGIE-------------GND
YK--LIEGKDD--------------DEATAARYYWHALGRIIP-------MKGR-------DPESTDPFNVSFNYAYAIL
YSNIQRVLQLVGLDPYAGFIHKDRSGKPSLVYDFSEMFKPVLVDYPLVSLFING------FIPN--VKDGILDAESRKKI
AEAVINAMNGKVKDEGGD--VRTGIQAMRAYALKLASALRGEEKFKG
>OMNI|NTL01AP01285/15-335
MMVVAEPGSRIRVARGALVVETKAG--KKV---VVESS-VERVIISSSRVSISSAAVRAAAKMGIDLVFLDWDGSPVAR-
---------LYPPIINKTVATRIGQFSANER-LRRL-IAAELVSAKIYNQGQTLKYIARQRADERLREAGY--EVELLSG
EPLRIADEDGPG------FRDKLLSIEARASRRYWQCIAEILPGR---LGFSGR-------DRGALDPFNAALNYGYGML
YSIVEKSLLLVGLDPYLGVFHSEKSGKPSLTLDAIEPFRAPIVDRILALKAGR-------MYLK--LEAGRLDYKSRKEV
AKAVASSLSMKAAVRGLG-RRIRLEDAIMVQARWLAEAFRGSGGFSA
>OMNI|NTL04PA0056/2-299
EVVVKDWGVSLGYSRGALVIKKRG---GVD---RIPLFQVDRIWILTGGVSISSRLVRALSHHFIDVVFFDAKGNPVAR-
---------LFPPEANGTVTHRRAQYEAYLT-GRGFELAKLVTYGKLINQARALRRLGQWKREHYG----------ALAE
AASKIADLAGRIP--SCADVQCVLGHEGAAASLYWDAVSKTTG-------LPGR-------NPEAADPLNLALNYGYGVL
KYAVWRQAVIHGLDPYAGYIHADKSGRPSLVLDLMEEFRP-HVDLLVIRLRPS--------ADW--ADGGVLKREIRAML
VEEWTG---------------ERLEPVIARQVGLAVAHLHGQRAYTP
>OMNI|NTL01MM0559/2-323
QLVINTRGSFLKKQNNCFLVKVDDK--TF----EVSEKKVDSILIT-TSATITTDAIKFAVENNIDIVFLDNFGDPYGR-
---------VWHSKLGSTTYIRRRQLQISEE-PEGFRLAKGWIEQKIDSQILFLKDLKKNRPDQKDELDD---YISGMED
MKFQLEALEG----KLDEMRGKIMGLEGMASRHYFAALSFLLPDK---WKFNGR------SRNPAKDEFNCLLNYGYGVL
YSKVEKACIIAGLDPYVGFNHTDDYNKKSFVFDLIEMYR-IHIDRTVFNLFSKKQVSDSFFDEI--PKGMTLNKEGKAVL
IQAVNETFDKEISYRGRN---IKIGNTIQFDCHRIANSLIGK-----
>OMNI|AF1878/2-340
RLVVDGFGKYLGIENGLIVVKEKGK--ALR---KVRPEDLKQVLII-GKAAISSDAIKLLLKNRVDVVFLDFNGEILGR-
---------LSHPLIG-TAKTRREQYLAYGD-KRGVHLAKEFIKAKMANQMAILTNLAKARKDSNPEVAES--LLKAKKE
IDACLNELDGVEAEMIDKVRERLLGIEGKASKHYWDAISLVIPEE---YRFNGRRGIEIGSPRYAKDIVNAMLNYGYSIL
LAECVKAVELAGLDPYAGFLHVDVSGRSSLAIDLMENFRQQVVDRVVLRLISYRQIKPEDCEKR--NMVCQLSDNARRLL
LASLLERLDSKTQYRGRN---LAYSSIILLHARDVVAFLRGERRYEG
>OMNI|NTL02ST0036/5-294
IAFVKDWGAYLRVNKGKIECVAKNE--VKW---SLSPAEVSSIIFL-VNSSLSTEVIRLANEFGIEMVFFH-DSEPIAR-
---------VITTKYGGSMKVWIKQIREAKK-NPEK-YAKQFVYGKLHNQWVTIHYYEKKYGFKLG---G-----DELYG
IAKEVLTENN---------IEQIMVKEAEGAKIYWKGVKYLLPKE---LGFKGRK-----KRGDNLDPFNKALNIGYGML
RKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRSPFVDRPLIGLAREN----------------YEKLKDLKVI
YSTFV-----------------FDEDEIYTQARRLVNSILHGDEYRP
>OMNI|NTL01BH0342/7-338
TLYVTQPDTYLSLDGDNVVLLKEQE--KLG---RLPLHNLEAIVGF-GYTGASPALMGYCAERNISITFLTKNGRFLAR-
---------VVG-ESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLR-VNVEQFKATSQLLSV
MMQEIRNCDS---------LESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGR------SRRPPKDNVNAMLSFAYTLL
ANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKK-ENGAVLMTDEARKTF
LKAWQTKKQEKITHPYLG-EKMSWGLVPYVQALLLARFLRGDLDEYP
>OMNI|NTL01NS1563/3-328
TVYVTQDDSFISKVDERLNVKFEKK--VIL---DVPLIKVDGLVVM-GRASISPAAIFELIDKKIPLTFLTNNGKYLAS-
---------LEP-EMGKNIFVRAAQWKAAGESEQAIHVTQGFIRGKLKNYRHTLLEAQRRYEVD------LNSNISQLSN
AIASIDKANS---------INTIRGLEGAGSAAYFGCFNQLIRVDN--FSFHTR------NRRPPIDPVNSLLSLGYSLL
RHDVQGALNIVGFDPYLGYLHTERYGRPSLALDLMEEFRPLIVDAVVLTAINRRMLSPKDFITEPISNAVSLTKEGLHIF
LRLYQEKKQTQFKHPVMQ-KKYTYQETFEIQARLLAKYLLGELDKYP
>OMNI|NTL01NS1464/337-662
TLYITDQGAYLSVKNQQFQVFHQGE--LRI---KVPVMRVSNVVLF-GCCNVSHGAVSMALRRRIPIMYLSQKGRYFGR-
---------LQT-EGDAKVEYLMLQVERCQNHEFTRKQAEAIVRAKLHNSRALLLKLNRRHPSKIAAT-----AISGIAE
LMEKLSLAES---------MDSLRGYEGKAATLYFQGLGSLFTG---AFVFEKR------TKRPPTDPVNSLLSLGYTLL
SQNVFSFVQVIGLHTHFGNLHVPRDNHPALVSDLMEEFRAQLVDSLVAYLINSKIFTFEDFTPPDEKGGVYLQPHALKKF
LKHWEEKLQSEVTHPHTG-YQVSLRRCLELQVREYITSLTGEVELYR
>OMNI|NTL01NS0380/41-369
TLYLTEPGTILRYRNESLIIMKQ-E--KSH---NCRLAEITLIVVL-PGVQLTDVVISQLLDRGIETIFLRQDGQFRGR-
---------LQG-HFATNMTIRLAQYR-TVETTFGMALAQKLVIGKVRNQRVLLQRRNRATNGQISELTEAIDLISVYAS
QLNNTTTPLN---------RNELMGVEGICARTYYQALKHWFPT---QWNFNGR------NRRPPLDPINALLSWGYGVL
LARVFSACVQAGLDPYLGFFHAIEPYRPNLVLDLMEEFRPVVVDQAVISLIQSDLLTQEDFQPSPDGVGIWLGTMGKKLL
LGELERRFRTSVLYPPQN-RQLSLNQILLEQARSLGRCLLQSKLDYE
>OMNI|NTL02LI3180/213-545
TLHVFGHDSRIKKSDNVLLVEKVTETGEKSKSEKIPIQEIESVNIH-GNCQISSQMIKFLVSEEIPVHWFSGGGNYIGG-
-----------ININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKCESQLRYLLRATRGKDETRNETES---YLATIRS
GLKNIESADS---------PSQLLGIEGSSARAYFSGLPALLKNSDPFLVPNGR------SKRPPKDPFNATLSFLYSLL
YKSVRQAIIAVGLDPSFGFYHTPRSSAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEIT--KNKVWLSESGRKKA
TQLYETRLDDTWKHPVVN-YSLSYYRMIELEVRLLEKEWSGEANIFA
>OMNI|MT2884/3-326
QLYVSDSVSRISFADGRVIVWSEELG--ES---QYPIETLDGITLF-GRPTMTTPFIVEMLKRERDIQLFTTDGHYQGR-
----------ISTPDVSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIRAHTSGQDVAES-----------IRT
MKHSLAWVDRSGS------LAELNGFEGNAAKAYFTALGHLVPQE---FAFQGR------STRPPLDAFNSMVSLGYSLL
YKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAPIIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSI
ARAFGNRIARTATYIKGDPHRYTFQYALDLQLQSLVRVIEAGHPSRL
>SP|Q57823|Y378_METJA/5-317
SLTLLSDG-YLFRKENTIYFENAR---GKK---PLAIEGIYDIYIY-GKVSISSQALHYLAQKGIALHFFNHYGYYDGS-
---------FYPRESLHSGYLVVNQVEHYLDKDKRLELAKLFIIGGIKNMEWNLLKFK-NKTKFSSYIE-----------
---ELNNCNK---------ITEVMNVEGRVRTEYYRLWDETLPDD---FKIVKR------TRRPPKNEMNALISFLNSRL
YPAIITELYNTQLTPTVSYLHEPHERRFSLALDLSEIFKPMIADRLANRLVKQGIIQKKHFRDD--LNGVLLNKEGMKVV
LEHFNKEMDKTVNHKKLK-KNVSKRRLIRLEAYKLVKHLVGQKRYEP
>OMNI|NTL01TT2460/4-325
TLYLFANG-KLYRKDNTICVEGEK---EKK---YFPVESVRDIYVF-GEVDLNKKFIEFAEEKEIILHFFGYYGNYVGS-
---------FYPREHYNSGYIILKQAEHYLDSARRLDLARRFVQGAVANMTQVLKYYQNRGRDLEDYLHA-------ISA
LEASLLSVSS---------IEELMALEGNIRRYYYESFNTILDDTP--FVLKNR------NKRPPTDPLNALISFGNSLV
YTKILTEIYKTHLDPRIGYLHTTNFRRFTLNLDVAEIFKPIYADRVLFTLLKKNIIKEDDFETQ--GEISLLKERGRRLY
VQEFEGKLQTTFYHRRLK-RNVSYQTLMRLELYKLEKHLIGEELYEP
>OMNI|TM1797/3-317
SVYLFSSG-TLKRKANTICLETES---GRK---YIPVENVMDIKVF-GEVDLNKRFLEFLSQKRIPIHFFNREGYYVGT-
---------FYPREYLNSGFLILKQAEHYINQEKRMLIAREIVSRSFQNMVDFLKKRKVRADSLTRYKK-----------
-KAEEA--SN---------VSELMGIEGNAREEYYSMIDSLVSDER--FRIEKR------TRRPPKNFANTLISFGNSLL
YTTVLSLIYQTHLDPRIGYLHETNFRRFSLNLDIAELFKPAVVDRLFLNLVNTRQINEKHFDEI--SEGLMLNDEGKSLF
VKNYEQALRETVFHKKLN-RYVSMRSLIKMELHKLEKHLIGEQVFGS
>OMNI|NTL01FN1753/12-333
SFFLYSNG-TLKRKDNTITFINEKD--EKR---DIPIEMVDDFYVM-SEMNFNTKFINYISQFGIPIHFFNYYTFYTGS-
---------FYPREMNISGQLLVKQVEHYTNEQKRVEIAREFIEGASFNIYRNLRYYNGRGKDLKLYMDQ-------IEE
LRKHLKEVNN---------VEELMGYEGNIRKIYYEAWNIIVN-QE--IDFEKR------VKNPPDNMINSLISFVNTLF
YTKVLGEIYKTQLNPTVSYLHQPSTRRFSLSLDISEVFKPLIVDRLIFSLLNKNQITEKSFVKD--FEYLRLKEDVSKLI
VQEFEDRLKQIITHKDLN-RKISYQYLVRLECYKLIKHLLGEKKYKS
>OMNI|NTL01TV0108/3-317
NFYITQDG-TITREGNTLYFIGPD---FKR---HLPVMNVQEIIIS-AKVSLSSWALDYLSKLGIIVHIISTNGKYMSS-
---------LIPGNRNERGNTTVQQVKAYLS-DKRFKIAAEMVNGIKNNILANLRYYS-DNNEITKYIKA-------IES
YNPDYNS-ND---------INKILGVEGNIWSTYYSAFPFIYKK----YPDFKR------EFYPPKDELNAMISYGNALL
YATVLTKIFITGLNPSISFLHEPSERSFSLALDIADIFKPVIVERTIANLVNKNIMAHDSFRFE--DNGCYLSLNGRRKF
IEYYNEKLNTVIKIG--N-NYLSYNNIIEREAYNLLNAIRNDEDYKS
>OMNI|NTL02YP1694/30-336
NIYYLEYCRVLVNGGRVEYVTDEGKQSLYW---NIPIANTTVIMLG-TGTSVTQAAMREFARAGVLVGFCGGGGTPLFAA
NDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFP--VNHDQLLFILTR
FEQNLANCLT---------SNDLMVQEAVLTKALYKLAAN-TVN----YGDFTRAKRG-----GGIDLANRFLDHGNYLA
YGLAATATWVIGLPHGLSVLHG-KTRRGGLVFDVADLIKDALVLPQAFIAAMQ-------------------GEEEQ-EF
RQRCISGFQ------R-----TEALDVMIDGIKETAALCSQVPR---
>OMNI|NTL01PM0313/22-326
NIYYLEHCRVLLNGGRVEYVTDEGRESLYW---NIPIANTSCLLLG-SGTSITQAAMRELSKAGVMVGFCSGGGTPLFNG
TEAEIGCEFFSPQSEYRPVMYLQQWCKFWFDDEKRLAVAKALQQQRLALLEPIWS----KLEWVY----SCEKLTALVTQ
YQHEFAQAAH---------SQALLAAEGRLTTKLYALANQATMN----EPDFKRSERG-----KSIDLVNQFLDHGNYLA
YGLGATACWVLGLPHGLAVLHG-KTRRGGLVFDAADIIKDSMILPQAFISAQN-------------------GDSEK-EF
RQACIQNLL------R-----FGALDIIIERLQQLALQGASDEYFAG
>OMNI|CT1977/32-296
PFLYLEKGRIEIDDSSIKWIDCDC---NVV---RLPVAMLNCILLG-PGTTVTHEAVKVMAAANCGICWVGDDSLMFYA-
----------SGQTPTSNTRNMTHQMKLAANPAKALEVARRLFAYRFPDANLENK-------------------------
------------------TLPQMMGMEGLRVRKLYEEMAVKYK-----VGWKGRRFEP--GKFEMSDTTNKILTASNAAL
YSIILSAVHSMGYSPHIGFIHS--GSPLPFIYDLADLYKQQVSIDLAFSLTADM-----------------AGYYDRHKI
ASEFRKRVI------E-----IDLLGKIGPDIETILGKKQCSS----
>SP|Q46896|YGBT_ECOLI/16-283
SMIFLQYGQIDVIDGAFVLIDKTG---IRT---HIPVGSVACIMLE-PGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYA-
----------SGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARR-------------------------
------------------SVEQLRGIEGSRVRATYALLAKQYG-----VTWNGRRYDP--KDWEKGDTINQCISAATSCL
YGVTEAAILAAGYAPAIGFVHT--GKPLSFVYDIADIIKFDTVVPKAFEIARRN-----------------PGEPDR-EV
RLACRDIFR------S-----SKTLAKLIPLIEDVLAAGEIQPPAPP