HMM Seed Alignment: TIGR00113

Download Alignment

>SP|P21516|QUEA_ECOLI/1-344
.MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKAS...GG
KIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD...ES......INATMTARHG.ALFEVEFNDE.R...SVLDILN
SIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIED
HIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKN....DLIEPFFDDTQIFIYPGFQYKVVDALVT
NFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT
>SP|P44595|QUEA_HAEIN/1-354
.MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENGEIFHRTFSDVLDLIDEGDLLIFNNTRVIPARMFGRKAS...GG
KIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGEDKLGENN....GIKAVMKARHG.ALFEVELSDKST...ALLDVLQ
TIGHMPLPPYIDRPDEEADQECYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIED
HVMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDTSIFIYPGKKFRVVDCLIT
NFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGDAMFIN
>SP|O32054|QUEA_BACSU/1-342
.MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTGELTDSSFKHIISFFNEGDCLVLNNTRVLPARLFGTKEDT..GA
KVELLLLKQETGDKWETLAKPAKRVKKGTVVTFG...DGR....LKAICTEELEHGG.RKMEFQYD.G.....IFYEVLE
SLGEMPLPPYIK..EQLDDKERYQTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEE
HNMHAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDG.....QFKASSGWTSIFIYPGYEFKAIDGMIT
NFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLII
>SP|Q55850|QUEA_SYNY3/4-355
DKYLSSYDYHLPADCIAQTPAVPRDHSRLLVV.KDPFTVDHQHFYDLGNYLKPGDLLVLNDTKVMPARLHGQKEN...GV
AVEILLLTECTENQWIALVKPGKRLKLGAKVKFPAR.DGEKPDLWATILQRDDATGG.RLLEFVLEPG.Q...RLWDVLP
DYGEIPFPPYIG..DRQATNDQYQTIYAEKLGAVAAPTAGLHFTEELFTKLAQQGVQTAKVTLHVGIGTFRPVEAENILD
HVMHQEWIDVPPTTVEVIEKTRASGGRIFAVGTTVVRCLEGMAQESDFP..RQPLQPFRGQTDLFIYPGYQWRLVDGLIT
NFHLPKSSLLMLVSALISRPRLMAIYETAIAKGYRFYSFGDAMVIL
>SP|O25702|QUEA_HELPY/3-345
EFDLESYDYYLPKELIASYPVLPKEKAKLLVYERRSQKITHTTFEHVLDFFPKNALIVLNDTKVIKARLFGSKHAFLPSK
TTEVFFHRFFKNNTALTQIKG..KIKVGDKIFFDANYHAE........VLEL.LHNGQRLIAFYDNKTPLNQENILKLLE
QYGHMPLPPYIKRADESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKL.LKDFKHAFLTLHVGAGTFLSVETKDIRE
HQIHTEVLRIPKKSQEILQKSQE....ILCVGTTALRSVEYFKRLENP.......NQEAFECDIFLHFANPILHVNYLLT
NFHLPKSSLLMLVSTMIGLEKTKEIYKTAIEKKYRFYSYGDGMLIL
>OMNI|BB0021/3-215
LMKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQKIYHKNSVNNILKYINS..NIFNNSKARKSRIYAESEM...SS
NVEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG...........LMDEILSKNS.SEVVLKFNNN.....VGEDYFE
KHCFVPLPSYIKRDYDKIDEDRYQTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAWDFSSCKI.....
................................................................................
..............................................