HMM Seed Alignment: TIGR00105

Download Alignment

>SP|Q8E9Z0/1-67
MKPGIHPE-YAEITANC-TCGNVIKVNSTVGK---DLHLDVCGACHPFYTG--TQKVVDTGGRIDKFNKRFGML
>SP|P44367|RL31_HAEIN/1-67
MKQGIHPE-YKEITATC-SCGNVIKTRSTLGK---DINLDVCGNCHPFYTG--KQRVVDTGGRVERFNSRFKIP
>SP|P02432|RL31_ECOLI/1-67
MKKDIHPK-YEEITASC-SCGNVMKIRSTVGH---DLNLDVCSKCHPFFTG--KQRDVATGGRVDRFNKRFNIP
>RF|YP_346134/1-67
MKADIHPN-YPEVAVTC-SCGNKFETRSTFGK---ALAIDVCNECHPFYTG--KQKTLDTGGRVQKFADRFGAF
>RF|YP_412772/1-67
MKPDIHPD-YQEITVTC-SCGSTFQTRSTMGK---PLHIEVCSVCHPFYTG--KQKIVDTAGRVEKFRQKYGKK
>SP|P66190/1-68
MKQGIHPN-YHEVNVTC-SCGNKFATKSAMEK--ENFNIEVCSLCHPFYTG--TQKIVDTTGRVDKFNNKFGNL
>RF|YP_513974/12-79
MRQEIHPK-YTEVTVTC-SCGNTFVTRSTAGK--KEMNIDICSECHPFYTG--KQRIVDTAGRVDKFKKRFGGM
>SP|Q6A8B4/1-68
MKQGIHPD-YRETTVVC-TCGNTFTTRSTSQS--GTLNADVCSKCHPFYTG--KQKILDAGGRVARFERRYGKK
>RF|YP_482802/1-68
MKPDVHPT-YHETTVTC-TCGNTFTTRSTKEN--GVVNAEVCSQCHPFYTG--KQKILDVGGRVEKFERRFGRR
>RF|YP_290476/1-68
MKPGIHPD-YHVTQVTC-TCGNSFVTRSTAPN--GVIRAEICSSCHPFYTG--KQKILDTGGRVARFEKRFGKR
>SP|P56053|RL31_HELPY/1-67
MKKGIHPE-YIPCKVTCVTSGKEIEVLSTKPE----MRIDISSFCHPFYTG--SDKIADTAGRVEKFKQRYNLK
>SP|Q03223|RL31_BACSU/1-66
MKAGIHPN-FKKATVKC-ACGNEFETGSVKEE----VRVEICSECHPFYTG--RQKFASADGRVDRFNKKYGLK
>SP|P73292|RL31_SYNY3/2-68
PKADIHPTWYPDAKVTC-NGEVIMTVGSTKPE----INVEIWSGNHPFYTG--TQKIIDTEGRVDRFMRKYGMK
>RF|YP_426160/1-68
MKKDIHPD-YHDITVVM-TDGSEFVTRSTYKG--ESLRLDIDPKSHPAWTG--VHRLIDSGGQLAKFNKKFAGF
>RF|YP_422401/1-70
MKDNIHPD-YHEINVVM-TDGTEYKTRSTMGKAGDTLRLDIDPKSHPAWTG--VHRMVDTAGQLAKFKKRFEGF
>GB|AAZ04479/1-70
MKPGIHPD-YHEINVVM-TDGTEFKTHSCYGKAGDTLRLDVDPKSHPAWTG--VQRMLDTGGQVAKFNKRFAGI
>RF|YP_616994/1-71
MKKDIHPD-YHMITVKM-TDGTEYQTRSTWGSEGDVMTLEIDPTAHPAWTGG-QGRMLDSGGQVAKFNKRFGGL
>RF|YP_496658/1-70
MKTGIHPD-YHMIKVQM-TDGTVFETRSTWGKEGETLALEIDPTSHPAWTG--GTRQLDQGGRVAQFNKRFGGL
>SP|Q5NNE1/1-71
MKQNIHPD-YHFIKVQL-TDGTVFETRSTWGKEGDTMKLDIDPRVHPAWTGG-RSQLVDAGGQVARFNKRFGAL
>RF|YP_266004/1-70
MKKDIHPD-YHTIKVEM-TDGTQFETRSTWGKEGEVLKLEIDPKSHAAWTGG-KQKLMDK-GRVSKFNKKFQNF
>SP|Q89UB0/1-71
MKAEIHPD-YHTIKVVM-TDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGG-NAQIMDRGGRVSRFQKKFSGF
>SP|Q6G1Z4/1-71
MKANIHPD-YHKITVVM-TDGSQYTTRSTWGKEGDVLNLDIDPRTHPAWTGG-SQTLVDHGGRISKFKNRFGNL
>SP|Q9A3C9/1-71
MKQDIHPD-YHFITVTL-TDGSSYKTRSTYGKEGANLALDIDPRTHPAWTGG-NAQLMDRGGRVSRFNAKFAGF
>RF|YP_508683/1-71
MKKDLHPE-YHVINVKM-TNGDVVEMRSIWGAEGDTLALDIDPTVHPAWTGG-GARLLDTGGRVSKFKKKYEGL
>RF|YP_614611/1-71
MKKDIHPD-YHFIDVKM-TDGTVVKMRSTWGNEGDQLALDIDPSAHPAWTGG-SSRLMDTGGRVSKFKKKYEGL
>RF|YP_354128/1-71
MKKGIHPD-YHMIDVKM-TDGTVFQIRSTWGKEGEQMALEIDPLAHPAWTGG-TAKLMDTGGRVSKFKNKYAGL
>SP|P78020|RL31_MYCPN/1-69
MKKDFHFP-SQSVSFKCASCSNSFTIESTLKQ--KEITIDICGKCHPFYIGELTKQTVH--GRAEKLSGKFNAG
>SP|P47499|RL31_MYCGE/1-69
MKKAIHFQ-SQPVVFNCASCNSNFTIDSTAKQ--KDLAIDICGKCHPFYIGQLTKQTVH--GRAEKLSQKFNAG