HMM Seed Alignment: TIGR00088

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>SP|P07020|TRMD_ECOLI/1-255
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGE
GAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
GHEASATEDSF..AEGLLDCPHYTRPE....VLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENL.ALTEEQ
ARLLAEFKTEHAQQQHKHDGMA
>SP|P43912|TRMD_HAEIN/1-246
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGE
GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL
GKQASAEEDSF..ADGLLDCPHYTRPE....VLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGL.ALTDEQ
RKLLKEAQAEHNS.........
>SP|O31741|TRMD_BACSU/1-243
MKIDFLTLFPEMFEGVLGSSILQKAQEKDAVQFQVVNFREYSDNKHNTVDDYPYGGGAGMVLKPQPVFDAVEDLTSKAAA
APRIILVCPQGERFTQKKAEQLAKEEHLLFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIADSVVRLLPGVL
GKEASHIEDSF..STGLLEHPHYTRPA....DYKGLKVPETLLSGNHAKIEEWRNKESIRRTYLRRPDLLKDH.PLTEQQ
RKWISEWEKE............
>SP|P72828|TRMD_SYNY3/1-231
MQFDVLTLFPDFFTSPLQSGLLGKALEKAIASVNLINPRDFTTDKHRRVDDEPYGGGVGMVIKPEPIFAAVESLPVLSKR
..EVILMTPQGQPMDQALFRELTNYDQLVLICGHYEGVDERVCQ.LVTREVSLGDFVLTCGEIPALTLINGVIRLLPGTV
GKEASLIAESF..STDLLDYPHYTRPP....VFRGLAVPPVLLSGNHQAIAQWRLEQQEERTQQRRPDLWQKWQDRQPSP
......................
>SP|O51641|TRMD_BORBU/1-239
MKFTVLSLFPAIIKPFFENSIMKKAINKGIVSFELVDVRDFSKDKHKRCDDLPYGGGAGMVLKAEPISFALEHVESAKK.
..TTIFLSPSGIKYSQELAYSLSKREEIVIICGRYEGIDQRIIDLYVDFEISIGDYVLSSGEIAALVLIDSVYRLLDGVI
NPN.SLLEESFGVKNGLLEYPHYTRPY....DFKGIKVPEVLLSGHHANIKNWRLVKAREKTKKNRYDLYLKYLEIIGED
NGFDKKN...............
>OMNI|NTL01MP0659/1-210
.....................MAQAQKAKLVEFEVINWRQYCKDKHQTVDDMAYGGGGGMVLKAEPILKALKACRTPQS.
..KVVLLSPEGQQFSQPMAQALTQTEHLILICGHYEGFDYRLYK.HVDQIISLGDFVLSGGELVALSVIDATVRLIKGVI
NDQ.SLIHESF..NNYLLDFPAYTRPY....DLDGDKVPEILLSGDHKKIEAYRKEQQLLRTAQYRPDLYKQYLAKKDEK
NK....................
>SP|P47683|TRMD_MYCGE/1-231
VKITVLTLFENTIWPYLNSSIMLQAQKANLVQFEVVNWRNFCNDKHKTVDDMAYGGGSGMVLKAEPIINCLNFYKAPNS.
..HVVLLSPEGEQFSQNCAKKLTKYEHLILLSGHYEGFDQRIYK.YIDQIVSLGDFVLSGGELVALSVIDATVRLIKGVI
NDQ.SLICESF..NDNLLDFPVYTRPY....DLKGDKVPEVLLSGDHQKIESFRKEQQILKTAKYRPDLYKKYLENKNEK
NK....................
>SP|O25766|TRMD_HELPY/1-229
VKFSVLTLFPQLVWPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMVENALHSVKNPKH.
..TIFLSAVGKPFKQTDAMR.LAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVL
GNAQSLENESF..ENHYLEAPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS.....
......................