HMM Seed Alignment: TIGR00066

Download Alignment

>SP|P18956|GGT_ECOLI/49-571
GMVASVDATAT.........QVGVDILKE.GGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS.KNGNTTAIDFREMA
PAKATRDMFLDDQGNPDSK.....KSLTSHLASGTPGTVAGFSLALDKYG..TMPLNKVVQPAFKLARDGFIVNDALADD
LKTYGSEVLPNHENSKAIFWKEGE.PLKKGDTLVQANLAKSLEMIAENG.PDEFYKGT..IAEQIAQEMQKNGGLITKED
LAAYKAVERTPISGDYRG........YQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRS
EYL.GDPDFVKVPWQALTNKAYAKSIADQIDINKAK..PSS....EIRPG......KLAPYE..SNQTTHYSVVDKDGNA
VAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDG.KTWLVTGSP
GGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQWLP....DELRVEK..GFSPDTLKLLEAKGQKVALKEA....MGS
TQSIMVGPDGE...LYGASD.PR
>OMNI|HP1118/38-564
GLALSSHPLAS.........EIGQKVLEE.GGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL.ANGENVALDFREKA
PLKATKNMFLDKQGNVVPK.....LSEDGYLAAGVPGTVAGMEAMLKKYG..TKKLSQLIDPAIKLAENGYAISQRQAET
LKEARERFLKYS.SSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLG.AKGFYQGQ..VAELIEKDMKKNGGIITKED
LASYNVKWRKPVVGSYRG........YKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRS
VYM.GDADFVSVPVDKLINKAYAKKIFDTIQPDTVT..PSS....QIKPG......MGQLHE..GSNTTHYSVADRWGNA
VSVTYTINASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNN.KVFLVVGSP
GGSRIITTVLQVISNVIDYNMNISEAVSAPRFHMQWLP....DELRIEKF.GMPADVKDNLTKMGYQIVTKPV....MGD
VNAIQVLPKTKGSVFYGSTD.PR
>SP|P54422|GGT_BACSU/47-575
GMVATAHPLAS.........EIGADVLKK.GGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERA
PAGATPDMFLDENGKAIPFS....ERVTKGTAVGVPGTLKGLEEALDKWG..TRSMKQLITPSIKLAEKGFPIDSVLAEA
ISDYQEKLSRTA..AKDVFLPNGE.PLKEGDTLIQKDLAKTFKLIRSKG.TDAFYKGK..FAKTLSDTVQDFGGSMTEKD
LENYDITIDEPIWGDYQG........YQIATTPPPSSGGIFLLQMLKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRA
SYA.GDPEFVNVPLKGLLHPDYIKERQQLINLDQVNKKPKAGDPWKYQEGSANYKQVEQPKDKVEGQTTHFTVADRWGNV
VSYTTTIEQLFGTGIMVPDYGVILNNELTDFDAIPG........G..ANEVQPNKRPLSSMTPTILFKDD.KPVLTVGSP
GGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNSM.....SSYRYED..GVPKDVLSKLNGMGHKFGTSPVD...IGN
VQSISIDHENG..TFKGVADSSR
>OMNI|NTL01BS3605/10-517
QMVVSPHYLAS.........QAGNRILDK.GGNAFDAAVAVSACLAVVYPHMTGLGGDSFWLTFHQETKAVKVYNGSGRS
GKNVTRDVYKGKSAIPLRG.........IDSAITVPGMVDSWDAVLKEYG..RLSLADVLEPARDYAQNGFPVSADQCRH
TEKNIELLASTP.YTADIFTRRGKAPV.PGERFVQKELADSLNLIAEKG.RSAFYEGD..LAQRIVSHLQNNGSYMTIDD
FKAHRGEWAAPVSSDYRG........YSVYQAPP.NSQGFTGLLTLNILENYDFTQIEHGSFEYYHVLVEALKKSFLDRD
AVL.TDPAFADIPLERLLDKRYAKQLAEEIGYLAIP...AE................SRPV...GSDTAYAAVIDADGNA
VSFIQSLYFEFGSAVTAGDTGILLQNRGSFFSLDEN........H..VNTLEPRKRTFHTLMPAMVCKGG.KPKILYGTQ
GGEGQPQTQTAIITRMLDYGMHPQQAISEPRWVWGRTWGEEYEGLRVEG..RFTDKTIQKLKDSGHLVEVVGDYDPLMGQ
AAAIKVDEEGF...LQGGAD.PR
>SP|P74181|GGT_SYNY3/7-508
GVVAAGHAQTA.........EAGKCMLEE.GGNAFDAAIASVLAACVVESSLTSLGGGGFLLAQT.AAKKSYLFDFFCQT
PQVNPGEKAVDFYPVALNFGGAWQTFHIGKGAIAVPGMVAGLFAAHRKLG..QLPFKVLIEPAVAYARQGFTLN.RFNDF
TNGLLEPILTQQEEGRKFYAPQGK.ILRQGEKAYLPQFADVLEQLARHG.PDWFYRGE..LTEWVLESLGEAS.ALTAKD
WADYQVEIRLPLRAQYRQ........RQLLTNPPPSAGGILIAFALQLLEKYDLSQYPLGSAAQIQLFSQVMALSNQARR
QYLDGNLHCGDIEAKFLGGDRLASELGQSKFINKLG..............................STTHISVLDGEGNA
ASLTSS.NGE.GSGHFIPGTGIMLNNMLGEEDLNPQ........G..FYQWPPGQRLSSMMAPTILLDQE.QPRLVLGSG
GSNRIRSAILQVVCHHLDYQLPLAEAVGRERIHWEAH......KLDLEPT.SVADILAQLRFDDGTQGTLWTEQNMFFGG
VHGVATTTAGT...MEGVGD.PR
>GP|596034|gb|AAB67344.1/101-652
LLKVGLHGAISSDLEVCSNLTINEVLLKFPGSNAADAAVTQALCKGMVNFFNSGIGGGGYVVFSGKDDEDHLSIDFREKA
PMDSHKFMFENCSLCSKIG..........GLAVGVPGELMGLYRLFKERGSGQVDWRDLIEPVAKLGSVGWQIGEALGAT
LELYEDVFLTLKEDWSFVLNSTHDGVLKEGDWIKRPALSNMLMELAKNGSVAPFYDPDHWIAKSMIDTVAKYNGIMNLQD
VSSYDVHVTKPLSMKIRKGANFIPDNDMTVLTSSGSSSGAALLAALRIMDNFQNQEGGDYEKETTYHLLESMKWMASARS
RLGDFEGEALPKHIEEVLDPEWALKAVKSIKRNSQDGNFKTLENWTLYDP......AYDINN..PHGTAHFSIVDSHGNA
VSLTTTINLLFGSLVHDPKTGVIFNNEMDDFAQFNKS.NSFELAPSIYNFPEPGKRPLSSTAPTIVLSELGIPDLVVGAS
GGSRITTSVLQTIVRTYWYNMPILETIAYPRIHHQLLP....DRIELESFPMIGKAVLSTLKEMG..YTMKEVFP..KSV
VNAIRNVRGEW....HAVSDYWR