HMM Seed Alignment: TIGR00046

Download Alignment

>OMNI|NTL01EC02881/8-252
LTMRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDG.SNQVFDAEITSASKKSVEVKVLEGQIDDRESP
LHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLE
.........AWCAEQDE.GLKLNLHPRASNSINTLP..LP.VERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRT
ETTALTAITALQVRFGDL.G..
>SP|P44627|YGGJ_HAEIN/1-245
..MRIPRIYHPISLENQTQCYLSEDAANHVARVLRMTEGEQLELFDG.SNHIYPAKIIESNKKSVKVEILGRELADKESH
LKIHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAACEQCGRNIVPEIRPLMKLQ
.........DWCAENDG.ALKLNLHPRAHYSIKTLPT.IP.AGGVRLLIGSEGGLSAQEIAQTEQQGFTEILLGKRVLRT
ETASLAAISALQICFGDL.GE.
>SP|P72667|Y722_SYNY3/62-303
FVMAYRLVVAPEQIIEAT.VTLTTAQLHYLQRVLRLQKGDGFMVLDG.GGGVWRAQLNDLAHG..TAQLLETVSEQNELP
LPVTLAIALPKGSGFEEIIRPCTELGATAFQPLLTERTLLKPSQ....NKLERWQRIVTEAAEQSERQWLPPVAAPLTFG
......QFVEKVAGPETLALLCVTRLNSPMLGAYLKQSNL.PAQIVLATGPEGGWTDNEISLAIAKGFQPVSLGKRILRA
VTAPTVALAQINALLES.....
>SP|P54461|YQEU_BACSU/1-256
.MQRYFIELTKQQIEEAPTFSITGEEVHHIVNVMRMNEGDQIICCSQ.DGFEAKCELQSVSKDKVSCLVIEWTNENRELP
IKVYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRNEVPRVMDVHSFQ
QLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLP...K.GSSLLIVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRT
ETAPLYALSAISYQTELLRGDQ
>SP|O25138|Y374_HELPY/1-226
....MRFVYHPLAKEPVL..KIEGESYTHLYRSRRVKSASRLDLRNLKDGFLYTYEHAEITKKHALLKLVGARLLEVMAS
KKTHLILSVIEIKNIEKILPFLNQLGVSKLSLFYADFSQRNEKID..IAKLERFQKILIHSCEQCGRSALMELEVFSNTK
.........E.ALKAYPKASVLDFKGETLPASADFE........KGVIIGPEGGFSEPERGYFKEREIYRIPLD.MVLKS
ESACVFVASIAQV.........
>SP|O51333|Y358_BORBU/1-243
...VKQIVLDENCLAGNFIIVKDAKIYHHLVNVRRLKKGDKLNILLK.DKELRASEIVKIGSNFIKFTTNKIDKIE.KNN
FEISIFISSLKGRKIDLVLRQVVEIGVSEINIINADRSVSKIDINNASAKILRFSKIIDEALKQSGNKIVPKINFYNNFF
..........YLPYSFCTTRYYVAHPSGMILSKNES..FDNFGKIGIIIGPEGCFSESEIVFFKEKGFNFVRFNTPILRA
DTAIIYSLAYFKALLEDYNG..
>SP|O51089|Y062_BORBU/1-238
....MNLMLITFNEFKTG.ISLNDTRAEHLVKILKLKDNDKFKFGILGEKNIYHCIYKKDKKLFFKKIFKVGESNK...L
KKLYVLIGMIRPIVAKRIIKELASIGTYKIIFFNTELTEKSYLNS.KIFKNNDCEKHLIAGAMQGKITYLPKIKIIKNLK
.........ESLKYIQQENFEIKILLEKNSEKNLID..IEQINNAVIIVGPERGFTEKEKQLIAQYNFSPYSISTNTLRT
ETATIAASIITASKLINM....
>SP|O66552|Y165_AQUAE/1-229
....MHVFYSEERRGNLL..ILREGEVKHFR.VRRIEKDEEFGVIH..EGKIYVCKVRREDKREISCEIVEELETKLPPK
DITLYQSVTVDLKTMDTIVRQATELGVLTFVPIISERSFQKEEA..ILKKTEKWKRIVIEAMKQSRRPIPMEIKKPVRLS
.........DLIPESEENIILDNFYEGVKPKDVNLE.....AKTYSVVVGPEGGFSKRESQILREKGFKSVLLEPYTLRT
ETAVVSIVSILMNF........