HMM Seed Alignment: TIGR00021
Download Alignment>SP|Q9ZU38|RPIA_ARATH/36-260
LKRIAAYKAVEFVE..SGMVLGLGTGSTAKHAVDRIGELLRQG...KLE.NIVGIPTSKKTQEQALSLGIPLSDL.DAHP
V.IDLSIDGADEVD.PFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVK.HIGG...SKLALPVEIVPFCWKFTAE.
.KLRS...L..LEGYGCEANLRLG..EKGKAFVTDNGNYIVDMHVEE..DMGDLGAVSDAILRLPGVVEHGMFL.DMAST
VIIAGELGVK
>SP|Q9RW24|RPIA_DEIRA/6-222
LKKEAALRSVALVQ..SGQRVGLGTGSTAKYAIEELGRKLAAG...ELS.GIVGVSTSEASEKLAREVGIPTEPL.DPRP
..LDIAIDGADEIA.PNLDLVKGLGGALVREKMTEVQAKRLIIIADHTKLVT.RLG....EKAPLPIEIVPFGFLSTIE.
.RLRE...F..LPG....GRLRQ...PGAQPYVTDNGNYIFDAQLPA..EF.DARELERRIKGTLGVVDTGLFL.GMAER
AFVAAPDGVQ
>SP|Q7NPM5|RPIA_GLOVI/6-222
LKQTAARRAVELVE..DGMVVGLGTGSTAAFAVSVLAERVRLG.....L.RVVGIPTSERTARQAEAEGIVLGTL.AEQS
R.VDLTIDGADEVALGELALIKGLGGALLREKIVAAASERLIIIVDATKLVE.QLG....SHGPLPVEVAPFGWQATAR.
.ALER......LGA...EVNLRA...QHGQAFLTDGGHYILDCRFGP..IA.RPAELEAAIDRIPGVVESGLFV.GMASA
VIVADEGGIE
>SP|Q92PB8|RPIA_RHIME/6-226
MKIKAAEAALEHVE..SGMRLGIGTGSTAEEFVRLLAEKVASG.....F.QISGVPTSERTARLCLELGVPLKSL.DELP
E.LDLTIDGADEVD.GKLRLIKGGGGALLREKIVASASTRMIVIADESKVVD.VLG....AFK.LPIEINPFGQVATRL.
.AIEKTASRLGLAG...EIVVRS...SGDGVFMTDGGHLILDASFGR..IP.DADALAVELNAIPGVVEHGLFI.DVASM
AIIAGPEGAR
>SP|Q9A5Z4|RPIA_CAUCR/6-223
QKRISGEAAAELVE..NGMVVGLGTGSTAAWFVKALAARGLK........DIRGVPTSDATAALARELGIPLAAL.DDVK
T.VDLTVDGADEIG.PGLSLIKGGGAALLREKLVWEASTRCVVIADAAKRVP.ALG....KFP.LPIEVVRFGHVHTGY.
.RLADIAAEFDLP....PPRLRT...AERGMVVTDGGNLIYDMASGK..IE.DPTALAAALKSVTGVVDHGLFL.DLADE
ALVGTDEGVV
>SP|Q81CG8|RPIA_BACCR/3-218
LKQLAGEYAANFVN..DGMKIGLGTGSTVYWTIQKLGERVK.....EGL.SFQAVPTSKETEALAQQLNIPLISL.NDVQ
S.LDLTIDGADEID.SNLQLIKGGGGALLREKIVASSSKKLIIIADESKLVT.HLG....TFP.LPIEIIPFSWKQTEN.
.KIQS.......LG..CQTTLRLK..NN.ETYITDNNNMIIDCIFPN..HISNPVHLHTQLKMITGVVETGLFI.SMTST
AIIGTKNGIK
>SP|Q92D46|RPIA_LISIN/4-219
QKKIAGEKACEWIE..DGMVVGLGTGSTVYYTIEKLGEMVQ.....KGL.NITGVSTSIETEQQARTLGIPLKSL.NDVT
K.IDVTIDGADEIN.QAFQGIKGGGGALLREKMVAQASSKNIWVVGEEKLVT.ELG....KFP.LPLEVIPFGWKQIKR.
.MLEN.......DG..VETTLRKQ..SSGEIYETNNGNYILDIIN.Q..TFTNPEAWHEKLAGIPGVLEHGLFL.HYVDI
IICGKASGEI
>SP|Q88YY5|RPIA_LACPL/6-221
LKQLVGQKAVEYIQ..DGMQVGLGTGSTVKFMVDALGERVKN....EHL.NIVGVSTSDRTAAQAKALGIPMKSV.DEVD
H.LDLTIDGADEIA.DDFQGVKGGGAALLFEKIVAINSDKVMWIVDESKMVH.QLG....AFG.LPVEVIPYGSQHVFE.
.KMAA.......RG..YNPVFRKV..ND.ELVRTDSNNIIIDLHI.D..PITDPHALAEDLIHMVGVVEHGLFL.DMVNT
VIVGHANGPE
>SP|Q9A085|RPIA_STRPY/4-219
LKKIAGVTAAQYVT..DGMTIGLGTGSTAYYFVEEIGRRVKQ....EGL.QVVGVTTSSVTSKQAEVLGIPLKSI.DDID
S.IDLTVDGADEVD.KNFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVE.HLG....AFK.LPVEVVQYGADRLFR.
.VFEK.......AG..YKPSFRMK..GD.SRLVTDMQNYIIDLDL.G..CIKDPVAFGHLLDGTVGVVEHGLFN.GMVDK
VIVASKDGVT
>SP|Q8EN78|RPIA_OCEIH/7-222
LKKAVGEKAATMVK..DGMKVGLGSGSTVYWMIRSLGERIQQ....DGL.KIEGIPSSNQTATWAEEAGIPLTDF.SNVK
E.LDITIDGADEVD.ANNHLIKGGGAALFREKIIAQAAKEFVIIVDQSKVVE.TLG....EFS.LPVEVLPFSWQRTAN.
.EISK.......LG..CVPTVRVH..EE.EPLVTDNGNYILDCPF.K..VIPHPDKLNKEIKSIVGVIETGLFI.DMATT
VIVGEKDNIY
>SP|Q8ZGJ9|RIA2_YERPE/9-231
KRAAARRVIQDFVF..DGMTLGLGSGTTSHFFVRELGQHVAKG.....L.QLTCTTTSRATSEVARDVGIELSDP.NEMN
E.IDLTIDGPDEID.RRFNMIKGGGACLLWEKIIAHASKRMICICDETKIVN.CLG....QFP.LPVEIVPFAWKQTER.
.RVER...VLAEQGLHHVPIIRRM..GGGHPVITDSGNFILDCHCGA..IITAPEPLEIELNRIPGVVENGLFT.REATG
MVVGYFDGSS
>SP|Q97AU2|RPIA_THEVO/7-223
QKRNAAVEAASYVK..TGMVIGIGTGTTARYLIEELGRRVSEE...N.L.KIKGVCTSKKSEELARAAGIEISE..NPEQ
I.IDLTIDGADQVN.LHGTLIKGGGGALLREKIVAYNSKEMYVIVDSRKIDDENFG....SFP.LPVEVVPFLHRMTLE.
.NLRK...ICPSTDL......RKN..SDGTLFITDNGNYIADMKFGR..IRETNE.LEKKIKSIPGVVDVGLFN.NIADK
IFEGNDDGCN
>SP|Q8TQ69|RPIA_METAC/12-227
EKRAAGIAAAGLVS..SGMLVGLGTGSTVAYTIKELGRRVRE....EGLD.ILGVVTSYQSEMLAIEAGIRLTTL.AQHP
E.LDLAIDGADQID.SELRAIKGGGAAHTREKIVSVSARRFVVVADESKTS......KQLDKL.VPVEVLPFAKEPVVK.
.KIRE.......LG..GKPQLRSA.VKKDGPVITDNGNFVLDVEFGV...IKDPEALALQLSSIPGVVEHGIFC.NVS.E
LYIGNKDGAI
>SP|Q9HN33|RPIA_HALN1/11-221
KRRAGEAAVAEEVT..EGAVVGLGTGSTVAHAIRALG....A....EASD.VSGVATSFESRRRAVDAGVTVTSL.EAA.
S.VDVAIDGADQVA.DGV.LVKGGGAAHTREKYVAASADRFVVVADPSKES......DVVDVP.VPVAVVPDAWPVVVD.
.RVEA.......LG..GTATLRDA.ERKDGPVVTDTGSLVVDCDFGA...IETPEAVAASLSAVPGVVEHGLFV.GMADA
VYVGTDDGVR
>SP|P49247|RPIA_HUMAN/8-229
KKLAGRAAVENHVR..NNQVLGIGSGSTIVHAVQRIAERVKQ....ENLN.LVCIPTSFQARQLILQYGLTLSDL.DRHP
E.IDLAIDGADEVD.ADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDS..KNLGDQWHKG.IPIEVIPMAYVPVSR.
AVSQK.......FG..GVVELRMA.VNKAGPVVTDNGNFILDWKFDR...VHKWSEVNTAIKMIPGVVDTGLFI.NMAER
VYFGMQDGSV
>SP|P41994|RPIA_CAEEL/18-242
KKRAAFACGEKYVQ..SGCRLGVGSGSTVKYLVEYLKQGFQN....GSLKDIICVPTSFLTKQWLIESGLPVSDL.DSHP
E.LDVCIDGADEVD.GQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDS..KHLGDRYPN..VPIEVLPLAAQPLLR.
SIPRA.......EG..GSCQLRQA.VKKCGPIVTDNGNFIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFI.GCVDA
VFFAYSDGSV
>SP|Q12189|RPIA_YEAST/22-253
KRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPTGFQSRNLILDNKLQLGSI.EQYP
R.IDIAFDGADEVD.ENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSP.KHLGKNWRQG.VPIEIVPSSYVRVKND
LLEQL.......HA..EKVDIRQGGSAKAGPVVTDNNNFIIDADFGE...ISDPRKLHREIKLLVGVVETGLFI.DNASK
AYFGNSDGSV
>SP|P27252|RPIA_ECOLI/6-215
LKKAVGWAALQYVQ..PGTIVGVGTGSTAAHFIDALGTMKGQ........IEGAVSSSDASTEKLKSLGIHVFDL.NEVD
S.LGIYVDGADEIN.GHMQMIKGGGAALTREKIIASVAEKFICIADASKQVD.ILG....KFP.LPVEVIPMARSAVAR.
.QLVK.......LG..GRPEYRQG.V......VTDNGNVILDVHGME...ILDPIAMENAINAIPGVVTVGLFANRGADV
ALIGTPDGVK
>SP|Q9JTM5|RPIA_NEIMA/7-216
LKRIAAEKAVEFVP..ENEYIGIGTGSTINFFIEALGKSGKK........IKGAVSTSKKSSELLAQYDIPVVSL.NEVS
G.LAVYIDGADEVN.HALQMIKGGGGAHLNEKIVASASEKFVCIADESKYVS.RLG....KFP.LPVEVVESARSLVSR.
.KLLA.......MG..GQPELRIG.Y......TTFYGNQIVDVHGLN...IDQPLTMEDEINKITGVLENGIFARDAADV
LILGTEEGAK
>SP|Q9V0L6|RPIA_PYRAB/6-225
MKKIAAKEALKFIE..DDMVIGLGTGSTTAYFIRLLGDMIKKG...EVSDIVG.VPTSYQSRLLAIESGIPVATL.DQVD
A.IDVAVDGADEVD.PNLNLIKGRGAALTMEKIIESRAGMFIVLVDERKLVD.YLCQ...KMP.VPIEVIPQAWRAIVE.
.ELSI.......FN..AEAKLRMG.VNKDGPVITDNGNFIIDAKFPR...IDDPLDMEIELNTIPGVVENGIFA.DIADI
VIVGTKEGVK
>SP|Q99RT7|RPIA_STAAM/7-224
LKLMTLNDVLSQIN..GDMTLGIGTGSTMELLLPQMAQLIKE....RGYNITG.VCTSNKIAFLAKELGIKICEI.NDVD
H.IDLAIDGADEVD.PSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQ.YLGE...TFK.LPVEVDKFNWYHILR.
.KIES.......Y...ADIKVERR.VNEDVAFITDNGNYILDCKLPK...GIDPYKFHEYLIHLTGVFETGYFL.DMADQ
VIVGTQEGVK
>SP|Q822P7|RPIA_CHLCV/9-225
VKRHLAREAAALVTS.G.MLLGLGSGSTSREFIKAVAERKKQ....ENLD.IRAVASSKESYSLASSLGIPLIDDEEFIN
T..DLAVDGADEIDPQLR.MIKGGGGAIFREKILLQSSQRRLILADESKSVK.VLG....KFG.LPVEISPFGRSSIIAT
LENFG...........YLGNLRKN..PRGGFFITNNGNYIYDIHTPNV..YPHPEEDLLKLLQIHGIIEAGFVI..ENVE
VWLGYTNGQI
>SP|O51601|RPIA_BORBU/4-225
QKILVAKHAIDHYIK.SNMNLGIGTGTTIYYAIKYLSEKIKS....GSLKNLKFYTTSSDTKYLLSKEQIPYESNFSKLN
KNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLIIADETKIVK.KLGT...KMP.IPIEVAQNAVGFIMTR
LEEMN...........LEATLRICK.EKKGPTITDNNNYILDVKMHVE..NPEGTEKYFKLFP..GILEIGIFN..HKNT
RIVYYQDKQI