HMM Summary Page: TIGR04438

Functionsmall Trp-rich protein
Trusted Cutoff36.00
Domain Trusted Cutoff36.00
Noise Cutoff28.00
Domain Noise Cutoff25.00
Isology Typehypoth_equivalog
HMM Length76
AuthorHaft DH
Entry DateMay 8 2013 5:25PM
Last ModifiedMay 8 2013 5:25PM
CommentMembers of this bacterial protein family average 80 residues in length, and average nearly 6 Trp residues (two of which are invariant) in the first 45, which are strongly hydrophobic. Past this region, the protein is highly charged, with large numbers of Lys, Arg, Asp, and Glu residues. Members usually are divergently transcribed from a gene encoding a c-type cytochrome.