HMM Summary Page: TIGR04393

FunctionT5SS/PEP-CTERM-associated repeat
Trusted Cutoff23.00
Domain Trusted Cutoff23.00
Noise Cutoff20.00
Domain Noise Cutoff20.00
Isology Typerepeat
HMM Length49
AuthorHaft DH
Entry DateDec 7 2012 9:10AM
Last ModifiedDec 7 2012 9:10AM
CommentThis HMM describes a repeat about 50 amino acids in length, appearing sometimes more than ten times in tandem in a single protein. Most proteins with this repeat have a C-terminal autotransporter domain (TIGR01414, PF03797) and/or an N-terminal type V secretion system signal peptide (PF13018), while others instead have a C-terminal PEP-CTERM domain (TIGR02595).