HMM Summary Page: TIGR04390

Functionouter membrane protein, YaiO family
Gene SymbolyaiO
Trusted Cutoff32.00
Domain Trusted Cutoff32.00
Noise Cutoff31.50
Domain Noise Cutoff22.00
Isology Typedomain
HMM Length230
AuthorHaft DH
Entry DateNov 6 2012 12:51PM
Last ModifiedNov 6 2012 12:51PM
CommentMembers of this family share a domain of bacterial outer membrane beta barrel, up to the protein C-terminal residue (usually Phe or Trp). The member YaiO was shown experimentally to be localized to the outer membrane.
ReferencesRN [1] RM PMID:16522795 RT New Escherichia coli outer membrane proteins identified through prediction and experimental verification. RA Marani P, Wagner S, Baars L, Genevaux P, de Gier JW, Nilsson I, Casadio R, von Heijne G RL Protein Sci. 2006 Apr;15(4):884-9.