HMM Summary Page: TIGR04319

Functionsurface protein repeat Ser-Ala-175
Trusted Cutoff120.00
Domain Trusted Cutoff70.00
Noise Cutoff100.00
Domain Noise Cutoff50.00
Isology Typerepeat
HMM Length175
AuthorHaft DH
Entry DateApr 30 2012 4:41PM
Last ModifiedAug 12 2012 6:56PM
CommentThis serine and alanine-rich surface protein repeat, about 175 amino acids long, occurs up to nine times in surface proteins of some Lactobacillus strains, particularly in Lactobacillus rhamnosus. Members proteins have the N-terminal variant signal sequence described by TIGR03715 and C-terminal LPXTG signals for surface attachment by sortase.