HMM Summary Page: TIGR04281

Functionputative ABC transporter PGF-CTERM-modified substrate-binding protein
Trusted Cutoff325.00
Domain Trusted Cutoff325.00
Noise Cutoff240.00
Domain Noise Cutoff240.00
Isology Typehypoth_equivalog
HMM Length330
AuthorHaft DH
Entry DateFeb 7 2012 2:28PM
Last ModifiedFeb 10 2012 10:37AM
CommentMembers of this archaeal protein family resemble periplasmic substrate-binding proteins of ABC transporters and appear in gene neighborhoods with permease and ATP-binding cassette proteins. Notably, essentially all members also have the PGF-CTERM putative protein-sorting domain at the C-terminus, while more distant homologs (excluded by the trusted cutoff) instead have what appear to be lipoprotein signal peptides at the N-terminus.