HMM Summary Page: TIGR04279

FunctionTIGR04279 domain
Trusted Cutoff35.00
Domain Trusted Cutoff35.00
Noise Cutoff20.00
Domain Noise Cutoff20.00
Isology Typedomain
HMM Length316
AuthorHaft DH
Entry DateFeb 7 2012 11:50AM
Last ModifiedFeb 9 2012 10:22AM
CommentThis domain, with length just over 300 amino acids, occurs in predicted extracellular proteins in a number of methanogens, in one to three proteins per genome. The aromatic residue tyrosine, comprising about five percent of the amino acid composition, is overrepresented among the most highly conserved columns of the multiple sequence alignment. The three members of this family in Methanosarcina barkeri occur all within a six-gene region.