HMM Summary Page: TIGR04275
| Accession | TIGR04275 |
| Name | beta_prop_Msarc |
| Function | beta propeller repeat |
| Trusted Cutoff | 85.00 |
| Domain Trusted Cutoff | 30.00 |
| Noise Cutoff | 36.00 |
| Domain Noise Cutoff | 29.00 |
| Isology Type | repeat |
| HMM Length | 40 |
| Author | Haft DH |
| Entry Date | Feb 1 2012 4:14PM |
| Last Modified | Aug 14 2012 12:42PM |
| Comment | This model describes a repeat region found mostly in cell surface proteins of various methanogens. Methanosarcina barkeri, for example, has twenty such proteins, often with either seven or fourteen repeats. These repeats resemble the beta propeller repeats of the TolB periplasmic protein of Gram-negative bacteria, part of a complex associated with various functions including biopolymer transport (see TIGR02800). |