HMM Summary Page: TIGR04259

Functionoxalate/formate antiporter
Gene SymboloxlT
Trusted Cutoff335.00
Domain Trusted Cutoff335.00
Noise Cutoff290.00
Domain Noise Cutoff290.00
Isology Typeequivalog
HMM Length405
AuthorHaft DH
Entry DateJan 4 2012 4:44PM
Last ModifiedJan 4 2012 4:44PM
CommentThis model represents a subgroup of the more broadly defined model TIGR00890, which in turn belongs to the Major Facilitator transporter family. Seed members for this family include the known oxalate/formate antiporter of Oxalobacter formigenes, as well as transporter subunits co-clustered with the two genes of a system that decarboxylates oxalate into formate. In many of these cassettes, two subunits are found rather than one, suggesting the antiporter is sometimes homodimeric, sometimes heterodimeric.
Genome PropertyGenProp1034: decarboxylation/antiport proton-motive cycle: oxalate-formate (HMM)