HMM Summary Page: TIGR04251
| Accession | TIGR04251 |
| Name | SCM_rSAM_ScmF |
| Function | SynChlorMet cassette radical SAM/SPASM protein ScmF |
| Gene Symbol | scmF |
| Trusted Cutoff | 400.00 |
| Domain Trusted Cutoff | 400.00 |
| Noise Cutoff | 200.00 |
| Domain Noise Cutoff | 200.00 |
| Isology Type | equivalog |
| HMM Length | 353 |
| Author | Haft DH |
| Entry Date | Dec 22 2011 9:27AM |
| Last Modified | Feb 10 2012 10:37AM |
| Comment | A biosynthesis cassette found in Syntrophobacter fumaroxidans MPOB, Chlorobium limicola DSM 245, Methanocella paludicola SANAE, and delta proteobacterium NaphS2 contains two PqqE-like radical SAM/SPASM domain proteins, a PqqD homolog, and a conserved hypothetical protein. These components suggest modification of a ribosomally produced peptide precursor, but the precursor has not been identified. Of the two PqqE homologs of the cassette, this family is the more distant in sequence. |
| Genome Property | GenProp1029: radical SAM/SPASM system SynChlorMet (HMM) |