HMM Summary Page: TIGR04237

Functionseadornavirus/coltivirus VP9 protein
Trusted Cutoff45.00
Domain Trusted Cutoff45.00
Noise Cutoff24.00
Domain Noise Cutoff24.00
Isology Typeequivalog
HMM Length256
AuthorHaft DH
Entry DateNov 22 2011 9:28AM
Last ModifiedFeb 10 2012 10:37AM
CommentThis model, broader than related Pfam model PF08978, describes proteins VP9 in Coltivirus, and proteins with various designations in the seadornavirus group: VP9 in Banna virus, VP10 in Liao ning virus, and VP11 in Kadipiro virus.
ReferencesRN [1] RM PMID:10811934 RT Complete sequence determination and genetic analysis of Banna virus and Kadipiro virus: proposal for assignment to a new genus (Seadornavirus) within the family Reoviridae. RA Attoui H, Billoir F, Biagini P, de Micco P, de Lamballerie X RL J Gen Virol. 2000 Jun;81(Pt 6):1507-15.
Genome PropertyGenProp1016: seadornavirus protein set (HMM)