HMM Summary Page: TIGR04204

FunctionMAST domain
Trusted Cutoff150.00
Domain Trusted Cutoff150.00
Noise Cutoff55.00
Domain Noise Cutoff55.00
Isology Typesubfamily_domain
HMM Length183
AuthorHaft DH
Entry DateSep 21 2011 11:07AM
Last ModifiedFeb 10 2012 10:37AM
CommentThis HMM describes a domain (or in most cases the full length) of archaeal surface proteins that are putative targets for C-terminal processing by archaeosortase A (TIGR04125). Most members of this family belong to proteins encoded by tandem genes in the genus Methanosarcina. The putative processing signal, PGF-CTERM (TIGR04126), included within the domain definition, takes a variant form, with consensus motif PAF instead of PGF. We suggest the name MAST domain: Methanosarcina Archaeosortase-Sorted Tandem gene family domain.