HMM Summary Page: TIGR04200

FunctionXrtJ-associated TM-motif-TM protein
Trusted Cutoff40.00
Domain Trusted Cutoff40.00
Noise Cutoff29.00
Domain Noise Cutoff22.00
Isology Typeparalog
HMM Length60
AuthorHaft DH
Entry DateSep 17 2011 5:26PM
Last ModifiedFeb 10 2012 12:44PM
CommentThis model represents essentially the full length, ~60 residues, of a two-gene paralogous family from Acidobacterium sp. MP5ACTX8. Sequences consist of an N-terminal signal sequence ending in a GC motif, suggestive of the lipoprotein signal sequence, followed immediately by a C-terminal domain sequence with characteristics PEP-CTERM-like sequences, including a PExP motif and a transmembrane helix. Both members occur next to the novel exosortase variant, XrtJ, which contains a novel C-terminal domain.
ReferencesRN [1] RM PMID:22037399 RT Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification. RA Haft DH, Payne SH, Selengut JD RL J Bacteriol. 2012 Jan;194(1):36-48. Epub 2011 Oct 28.
Genome PropertyGenProp1005: protein sorting system, putative, exosortase J class (HMM)