HMM Summary Page: TIGR04155

FunctionPEP-CTERM protein sorting domain, cyanobacterial subclass
Trusted Cutoff21.60
Domain Trusted Cutoff20.00
Noise Cutoff18.75
Domain Noise Cutoff17.50
Isology Typesubfamily_domain
HMM Length27
AuthorHaft DH
Entry DateApr 14 2011 10:27AM
Last ModifiedAug 2 2011 2:33PM
CommentThis domain model describes a subclass with family TIGR02595 of PEP-CTERM protein sorting signals associated with bacterial exosortases. This subclass is restricted to Cyanobacteria, including the genera Cyanothece, Nostoc, Trichodesmium, Lyngbya, Arthospira, etc. This PEP-CTERM subclass features strongly conserved residues within the transmembrane region, including a Gx4GxG motif. Model TIGR03763 describes a corresponding cyanobacterial form of exosortase found in most species with this domain.
Genome PropertyGenProp0987: protein sorting system, cyano-PEP-CTERM class (HMM)