HMM Summary Page: TIGR04136

Functionradical SAM peptide maturase, FibroRumin system
Trusted Cutoff400.00
Domain Trusted Cutoff400.00
Noise Cutoff250.00
Domain Noise Cutoff250.00
Isology Typehypoth_equivalog
HMM Length458
AuthorHaft DH
Entry DateMar 2 2011 12:41PM
Last ModifiedAug 2 2011 2:33PM
CommentMembers of this protein family are radical SAM enzymes proposed to act on small, Cys-rich peptides encoded by tandem gene pairs. Members occur in enzymes Fibrobacter succinogenes subsp. succinogenes S85 (genes for their target peptides missed) and in Ruminococcus albus 8. This enzyme family is similar in sequence to the SCIFF (Six Cysteines in Forty-Five) system maturase (TIGR03974).
ReferencesRN [1] RM PMID:21478363 RT Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification. RA Haft DH, Basu MK RL J Bacteriol. 2011 Jun;193(11):2745-55.
Genome PropertyGenProp0982: radical SAM maturase system, FibroRumin system (HMM)