HMM Summary Page: TIGR04120
| Accession | TIGR04120 |
| Name | DNA_lig_bact |
| Function | DNA ligase, ATP-dependent, PP_1105 family |
| Trusted Cutoff | 400.00 |
| Domain Trusted Cutoff | 400.00 |
| Noise Cutoff | 340.00 |
| Domain Noise Cutoff | 340.00 |
| Isology Type | equivalog |
| EC Number | 6.5.1.1 |
| HMM Length | 526 |
| Author | Haft DH |
| Entry Date | Feb 9 2011 9:56AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM describes a family of ATP-dependent DNA ligases present in about 12 % of prokaryotic genomes. It occurs as part of a four-gene system with an exonuclease, a helicase and a phosphoesterase, with all four genes clustered or at least the first two and last two paired. This family resembles DNA ligase I (see TIGR00574 and PF01068), and its presumed function may be in DNA repair, replication, or recombination. |
| Genome Property | GenProp0977: DNA ligase/helicase system (HMM) |