HMM Summary Page: TIGR04118

Functionmodification target Cys-rich peptide, AC3_0185 family
Trusted Cutoff35.00
Domain Trusted Cutoff35.00
Noise Cutoff25.00
Domain Noise Cutoff25.00
Isology Typesubfamily
HMM Length46
AuthorHaft DH
Entry DateFeb 7 2011 2:26PM
Last ModifiedAug 2 2011 2:33PM
CommentRadical SAM enzyme family TIGR04115 is paired with a number of short peptides with multiple tandem repeats of Cys-Xaa-Xaa-Xaa (see TIGR04114). This family represent a peptide family with a TIGR04114-like region, although the repeat region is relatively short in this group.
ReferencesRN [1] RM PMID:21478363 RT Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification. RA Haft DH, Basu MK RL J Bacteriol. 2011 Jun;193(11):2745-55.
Genome PropertyGenProp0967: radical SAM maturase system, CXXX repeats type (HMM)