| Accession | TIGR04106 |
| Name | cas8c_GSU0052 |
| Function | CRISPR-associated protein GSU0052/csb3, Dpsyc system |
| Gene Symbol | csb3 |
| Trusted Cutoff | 125.00 |
| Domain Trusted Cutoff | 125.00 |
| Noise Cutoff | 30.00 |
| Domain Noise Cutoff | 30.00 |
| Isology Type | equivalog |
| HMM Length | 282 |
| Author | Haft DH |
| Entry Date | Jan 26 2011 10:13AM |
| Last Modified | Jul 23 2014 10:43AM |
| Comment | This HMM describes a CRISPR-associated (cas) protein unique to the Dpsyc subtype (named for Desulfotalea psychrophila), a variant type I-C subtype, although not universal to the that subtype. Members of this family occur in CRISPR loci of Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, Rhodospirillum centenum SW, Planctomyces limnophilus DSM 3776, and Methylosinus trichosporium OB3b. |
| References | RN [1]
RM PMID:21756346
RT Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems.
RA Makarova KS, Aravind L, Wolf YI, Koonin EV
RL Biol Direct. 2011 Jul 14;6:38. doi: 10.1186/1745-6150-6-38. |
| Genome Property | GenProp0021: CRISPR region (HMM) |
| | GenProp0469: CRISPR system, Dpsyc subtype (HMM) |
