HMM Summary Page: TIGR04067

Functionputative bacteriocin precursor, CLOSPO_01332 family
Trusted Cutoff45.00
Domain Trusted Cutoff45.00
Noise Cutoff30.00
Domain Noise Cutoff30.00
Isology Typeequivalog
HMM Length59
AuthorHaft DH
Entry DateOct 5 2010 3:12PM
Last ModifiedJun 9 2011 9:55AM
CommentMembers of this protein family are Cys-rich putative bacteriocin precursor peptides found in a few strains of Clostridium and Anaerococcus. This family is related to the family of CLI_3235 (TIGR04065). Members of both families are found next to a CLI_3234 family radical SAM protein that appears to perform post-translational modification.
ReferencesRN [1] RM PMID:21478363 RT Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification. RA Haft DH, Basu MK RL J Bacteriol. 2011 Jun;193(11):2745-55.
Genome PropertyGenProp0945: radical SAM maturase bacteriocin system, CLI_3235 type (HMM)