| Accession | TIGR04065 |
| Name | ocin_CLI_3235 |
| Function | putative bacteriocin precursor, CLI_3235 family |
| Trusted Cutoff | 26.00 |
| Domain Trusted Cutoff | 26.00 |
| Noise Cutoff | 20.00 |
| Domain Noise Cutoff | 20.00 |
| Isology Type | hypoth_equivalog |
| HMM Length | 34 |
| Author | Haft DH |
| Entry Date | Sep 30 2010 9:26PM |
| Last Modified | Jun 9 2011 9:54AM |
| Comment | Members of this protein family are Cys-rich putative bacteriocin precursor peptides restricted to the Clostridia but found in multiple species with up to three per genome. They are found next to a CLI_3234 family radical SAM protein that may perform post-translational modification. This model describes approximately 35 residues starting from the N-terminus. Precursor peptides average about 50 amino acids in length. |
| References | RN [1]
RM PMID:21478363
RT Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification.
RA Haft DH, Basu MK
RL J Bacteriol. 2011 Jun;193(11):2745-55. |
| Genome Property | GenProp0945: radical SAM maturase bacteriocin system, CLI_3235 type (HMM) |
